Changes in the soil fungal communities of steppe grasslands at varying degradation levels in North China.

The grasslands in North China are rich in fungal resources. However, the knowledge of the structure and function of fungal communities and the role of microbial communities in vegetation restoration and succession are limited. Thus, we used an Illumina HiSeq PE250 high-throughput sequencing platform to study the changing characteristics of soil fungal communities in degraded grasslands, which were categorized as non-degraded (ND), lightly degraded, moderately degraded, and severely degraded (SD). Moreover, a correlation analysis between soil physical and chemical properties and fungal communities was completed. The results showed that the number of plant species, vegetation coverage, aboveground biomass, and diversity index decreased significantly with increasing degradation, and there were significant differences in the physical and chemical properties of the soil among the different degraded grasslands. The dominant fungal phyla in the degraded grassland were as follows: Ascomycota, 44.88%-65.03%; Basidiomycota, 12.68%-29.91%; and unclassified, 5.51%-16.91%. The dominant fungi were as follows: Mortierella, 6.50%-11.41%; Chaetomium, 6.71%-11.58%; others, 25.95%-36.14%; and unclassified, 25.56%-53.0%. There were significant differences in the microbial Shannon-Wiener and Chao1 indices between the ND and degraded meadows, and the composition and diversity of the soil fungal community differed significantly as the meadows continued to deteriorate. The results showed that pH was the most critical factor affecting soil microbial and fungal communities in SD grasslands, whereas soil microbial and fungal communities in ND grasslands were mainly affected by water content and other environmental factors.

Artificial Grassland Had Higher Water Use Efficiency in Year with Less Precipitation in the Agro-Pastoral Ecotone.

Improving plant water use efficiency is a key strategy for the utilization of regional limited water resources as well as the sustainable development of agriculture industry. To investigate the effects of different land use types on plant water use efficiency and their mechanisms, a randomized block experiment was designed in the agro-pastoral ecotone of northern China during 2020-2021. The differences in dry matter accumulation, evapotranspiration, soil physical and chemical properties, soil water storage and water use efficiency and their relationships among cropland, natural grassland and artificial grassland were studied. The results show that: In 2020, the dry matter accumulation and water use efficiency of cropland were significantly higher than those of artificial and natural grassland. In 2021, dry matter accumulation and water use efficiency of artificial grassland increased significantly from 364.79 g·m-2 and 24.92 kg·ha-1·mm-1 to 1037.14 g·m-2 and 50.82 kg·ha-1·mm-1, respectively, which were significantly higher than cropland and natural grassland. The evapotranspiration of three land use types showed an increasing trend in two years. The main reason affecting the difference of water use efficiency was that land use type affected soil moisture and soil nutrients, and then changed the dry matter accumulation and evapotranspiration of plants. During the study period, the water use efficiency of artificial grassland was higher in years with less precipitation. Therefore, expanding the planted area of artificial grassland may be one of the effective ways to promote the full utilization of regional water resources.

Diversification of Sinorhizobium populations associated with Medicago polymorpha and Medicago lupulina in purple soil of China.

The double selection of environment adaptation and host specificity forced the diversification of rhizobia in nature. In the tropical region of China, Medicago polymorpha and Medicago lupulina are widely distributed, particularly in purple soil. However, the local distribution and diversity of rhizobia associated with these legumes has not been systematically investigated. To this end, root nodules of M. polymorpha and M. lupulina grown in purple soil at seven locations in Yunnan Province of China were collected for rhizobial isolation. The obtained rhizobia were characterized by RFLP of 16S-23S rRNA intergenic spacer, BOXAIR fingerprinting, and phylogeny of housekeeping and symbiosis genes. As result, a total of 91 rhizobial strains were classified into species Sinorhizobium medicae and S. meliloti, while three nodC gene types were identified among them. S. medicae containing nodC of type I was dominant in farmlands associated with M. polymorpha; while S. meliloti harboring nodC of type III was dominant in wild land nodulated by M. lupulina. For both rhizobial species, greater genetic diversity was detected in the populations isolated from their preferred host plant. A high level of genetic differentiation was observed between the two Sinorhizobium species, and gene flow was evident within the populations of the same species derived from different soil types, indicating that rhizobial evolution is likely associated with the soil features. To examine the effects of environmental features on rhizobial distribution, soil physicochemical traits and rhizobial genotypes were applied for constrained analysis of principle coordinates, which demonstrated that soil features like pH, nitrogen and sodium were the principle factors governing the rhizobial geographical distribution. Altogether, both S. medicae and S. meliloti strains could naturally nodulate with M. polymorpha and M. lupulina, but the rhizobium-legume symbiosis compatibility determined by both the host species and soil factors was also highlighted.

Dual-Modality Detection of Early-Stage Drug-Induced Acute Kidney Injury by an Activatable Probe.

Early detection of drug-induced acute kidney injury (AKI) is crucial for effective treatment and prevention of further injury. It remains challenging, however, because of the lack of activatable indicators with multimodality imaging capability that could increase the accuracy of diagnosis by mutual verification. Herein, we report an activatable probe, FDOCl-22, that enabled dual-modality detection of the early-stage drug-induced AKI. FDOCl-22 was completely soluble in water and highly sensitive to hypochlorous acid (HOCl). Dramatic increases of both near-infrared (NIR) emission and absorption were observed after reaction with HOCl. A correlation between HOCl concentration and drug-induced AKI was established using FDOCl-22 as a tool. As a consequence, the HOCl-activated probe was able to detect the early-stage drug-induced AKI by dual-modality imaging, irrespective of the drug stimulation time or dosage, by combining NIR fluorescence and photoacoustic imaging.

Detecting Basal Myeloperoxidase Activity in Living Systems with a Near-Infrared Emissive "Turn-On" Probe.

Detecting myeloperoxidase (MPO) activity in living organisms is important because MPO contributes to the pathogenesis of many diseases such as rheumatoid arthritis and other inflammatory diseases, artherosclerosis, neurodegenerative disease, and some cancers. However, rapid and effective methods for the detection of basal MPO activity in living systems have not yet been reported. Herein, we report a near-infrared (NIR) emissive "turn-on" probe FD-301 that can specifically bind to MPO and accurately measure MPO activity in living cells and in vivo via a rapid response to initial hypochlorous acid (HOCl), produced by MPO. Notably, FD-301 could detect the basal level of MPO activity in human promyelocytic leukemia cells (HL-60) and could discriminate between MPO high-expression and low-expression cells. Furthermore, FD-301 was successfully applied to in vivo imaging of MPO in MPO-dependent diseases, such as arthritis and inflammatory bowel disease.

Self-Assembly of Amphiphilic Peptides for Recognizing High Furin-Expressing Cancer Cells.

Self-assembled nanostructures of amphiphilic peptides have a wide range of applications in bioimaging and delivery systems. In this study, we design and synthesize a biocompatible amphiphilic peptide (C-3) consisting of an RVRRFFF sequence and a nitrobenzoxadiazole fluorophore that can self-assemble into stable micelles for specifically detecting furin, a kind of proprotein convertase with promoting tumor progression. The self-assembly of C-3 with a ß-sheet nanostructure is capable of a rapid and specific response to furin in only 5 min in aqueous solution because of the existence of the RVRR motif in the C-3 molecule. The C-3 nanostructures thus can selectively distinguish high furin-expressing cancer cells, like MDA-MB-231 cells, a kind of human breast cancer cells, from normal cells. Furthermore, the C-3 self-assembly can stay in living cells for a long time and are capable of durable detection of intracellular furin, being good for tracer analysis. To our knowledge, this is the first example of self-assembly of a soluble amphiphilic peptide that can selectively detect furin in high furin-expressing live cells.

Comparative transcriptomic analysis of resistant and susceptible alfalfa cultivars (Medicago sativa L.) after thrips infestation.

BACKGROUND: Plant breeding for resistance to agricultural pests is an essential element in the development of integrated crop management systems; however, the molecular and genetic mechanisms underlying resistance are poorly understood. In this pilot study, a transcriptomic analysis of a resistant (R) vs. a susceptible (S) variety of alfalfa, with (+T) or without (-T) thrips (= 4 treatments) was conducted, 'GN-1' (China) was defined as the resistant cultivar, and 'WL323' (America) was defined as the susceptible cultivar. RESULTS: A total of 970 mRNAs were differentially expressed, of which 129 up- and 191 down-regulated genes were identified in the R + T/R-T plants, while 413 up- and 237 down-regulated genes were identified in the S + T/S-T plants. KEGG analysis mapped 33 and 80 differentially expressed genes to 11 and 14 substantially enriched pathways for GN-1 and WL323, respectively. Five shared pathways were linked to plant resistance traits, including beta-Alanine metabolism, fatty acid degradation, chloroalkane and chloroalkene degradation, flavonoid biosynthesis, and phenylalanine metabolism. CONCLUSIONS: Results indicated both thrips resistant and susceptible alfalfa cultivars can regulate gene expression in the salicylic acid (SA) and flavonoid biosynthesis pathways to induce defensive genes and protein expression (e.g. polyphenol oxidase, protease inhibitor), which enhances plant defence capacity.

Mitochondria-Directed Fluorescent Probe for the Detection of Hydrogen Peroxide near Mitochondrial DNA.

It is important to detect hydrogen peroxide (H2O2) near mitochondrial DNA (mtDNA) because mtDNA is more prone to oxidative attack than nuclear DNA (nDNA). In this study, a mitochondria-targeted fluorescence probe, pep3-NP1, has been designed and synthesized. The probe contains a DNA-binding peptide, a H2O2 fluorescence reporter, and a positively charged red emissive styryl dye to facilitate accumulation in mitochondria. Due to groove binding of the peptide with DNA, the styryl dye of pep3-NP1 intercalated into the bases of DNA, leading to an increase in red fluorescence intensity (centered at 646 nm) and quantum yield. In this case, pep3-NP1 was a turn-on probe for labeling DNA. Subcellular locations of pep3-NP1 and MitoTracker suggested that pep3-NP1 mostly accumulated in the mitochondria of live cells. Namely, as an intracellular DNA marker, pep3-NP1 bound to mtDNA. In the presence of H2O2, pep3-NP1 emitted green fluorescence (centered at 555 nm). Thus, the ratio of green with red fluorescence of pep3-NP1 was suitable to reflect the change of the H2O2 level near mtDNA in living cells. The detecting limit for H2O2 was estimated at 2.9 and 5.0 µM in vitro and in cultured cells, respectively. The development of pep3-NP1 could help in studies to protect mtDNA from oxidative stress.

[Distribution of lichens biomass and its affecting factors during restoration process of Inner Mongolia steppe].

An experiment was installed in the typical steppe area of Central Inner Mongolia to study the distribution characteristics of lichen biomass in the restoration process. The experimental areas were continuously grazed for ten years (1989 to 1998) under different stocking rate, and stopped grazing since 1999. Two years (2001 to 2002) monitoring on the distribution of lichen biomass and its affecting factors showed that no significant difference was found between different stocking rate treatments (P < 0.05). There existed positive correlations between lichen biomass and plant species diversity and between soil water content and soil organic matter content (P < 0.05), and negative correlations between lichen biomass and soil bulk density, and between Gramineae plant functional group and plant community coverage and biomass (P < 0.05).

[Changes of soil chemical properties in sheep urine patches in Inner Mongolia steppe].

Sheep play an important role in the nutrient cycling in extensively grazed grasslands, mainly through their annual return of around 5-25 kg N in the shape of urine. This return changes the temporal distribution of nutrients in soil and alters their bioavailability. Urine patches are the most important areas of the transformation and cycling of nutrients in the grazed grasslands. In order to make known the changes of soil chemical properties in sheep urine patches, an experiment was set up in the typical steppe area of central Inner Mongolia. The results indicated that soil pH value reached the maximum on the second day after urine excretion, and then declined. It maintained at around 6.5 from the 58th day, which was under the level of the control. Soil dissolved organic carbon (DOC) in urine patches exhibited the identical changing characteristics with soil pH, and had a significantly (P < 0.01) positive correlation with it. Soil total dissolved phosphorus (TDP) increased significantly (P < 0.05) after urine excretion, and reached the maximum at the 2nd day. The percentage of molybdate reactive phosphorus (MRP), dissolved organic phosphorus (DOP) and dissolved condensed phosphorus (DCP) showed significantly two changing phases, and there existed significantly (P < 0.05) negative correlations between MRP, DOP and DCP. Soil NH4+-N reached the maximum on the 2nd day after urine excretion and then declined, while soil NO3(-)-N increased significantly after 14 days and reached the maximum on the 21st day, showing significant "double peaks" characteristics. Soil dissolved organic nitrogen (DON) also increased significantly after urine excretion.