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1.
Blood ; 91(6): 2118-25, 1998 Mar 15.
Artigo em Inglês | MEDLINE | ID: mdl-9490698

RESUMO

Interleukin-18 (IL-18) is a costimulatory factor for interferongamma (IFNgamma) production. Processing of pro-IL-18 by IL-1beta-converting enzyme (ICE) leads to the release of bioactive IL-18. Compared with wild-type (WT) mice, splenocytes from ICE-deficient mice produced low IFNgamma after lipopolysaccharide (LPS) or zymosan (50% and 80% reduction). In contrast, IFNgamma production was unimpaired in ICE-deficient mice using Concanavalin A (Con A). Comparable results were obtained when endogenous IL-18 was blocked with a neutralizing antibody. LPS-induced IFNgamma was also reduced by an ICE inhibitor. Exogenous IL-18 augmented zymosan-induced IFNgamma production in WT mice. In ICE-deficient cells, IFNgamma production was only partially restored by IL-18. The reduced levels of IFNgamma in ICE-deficient mice were not due to a lack of IL-12, because zymosan induced IL-12 equally in WT and in ICE-deficient mice. IFNgamma is an important regulator of cell proliferation. In accordance, splenocytes from ICE-deficient mice proliferated more when stimulated with LPS, but not with Con A. Furthermore, in ovalbumin-sensitized ICE-deficient mice, proliferation of lymph node cells in response to the specific antigen was not altered. Exogenous IFNgamma inhibited, whereas blockade of endogenous IFNgamma or IL-18 increased, LPS induced splenocyte proliferation both in WT and in ICE-deficient mice. Our results show that IL-18 is an IL-12-independent regulator of IFNgamma production and of cell proliferation induced by microbial stimuli. However, ICE-dependent processing of IL-18 is not needed for response to mitogens or antigens.


Assuntos
Cisteína Endopeptidases/deficiência , Citocinas/fisiologia , Interferon gama/biossíntese , Linfócitos T/metabolismo , Animais , Caspase 1 , Divisão Celular/efeitos dos fármacos , Células Cultivadas , Concanavalina A/farmacologia , Cisteína Endopeptidases/genética , Cisteína Endopeptidases/fisiologia , Citocinas/farmacologia , Feminino , Regulação da Expressão Gênica/efeitos dos fármacos , Imunização , Interferon gama/genética , Interleucina-12/biossíntese , Interleucina-12/genética , Interleucina-18 , Lipopolissacarídeos/farmacologia , Linfonodos/citologia , Ativação Linfocitária/efeitos dos fármacos , Masculino , Camundongos , Camundongos Knockout , Ovalbumina/imunologia , Reação em Cadeia da Polimerase , Baço/citologia , Linfócitos T/efeitos dos fármacos , Zimosan/farmacologia
2.
Adv Exp Med Biol ; 436: 75-83, 1998.
Artigo em Inglês | MEDLINE | ID: mdl-9561202

RESUMO

VX-478 (141W94), a potent inhibitor of HIV protease, is in late stage clinical trials for the treatment of HIV infection and AIDS. Resistant viruses were raised in vitro by passage of HIV-1IIIB in the presence of increasing concentrations of VX-478 and the related hydroxyethylamino sulfonamide inhibitor VB-11,328. By direct PCR analysis of selected viruses, a number of mutations were identified (L10F, M46I, I47V, I50V and I84V) in the protease gene. These mutations were introduced into recombinant HIV-1 protease and the mutant enzymes assayed against a panel of inhibitors of diverse chemical structure. For VX-478, significant increases in IC90 and Ki were observed for virus or protease, respectively, containing I50V single mutation or an M46I/I47V/I50V triple mutation. The mutant proteases were also characterized for their kinetic competence to process substrates representing cleavage sites of gag-pol viral polypeptide. The kinetic data were interpreted with the aid of molecular modeling to understand the effect of mutations on inhibitor binding and processing of the gag-pol polypeptide to generate infective virions.


Assuntos
Variação Genética , Protease de HIV/genética , Carbamatos , Resistência a Medicamentos , Furanos , Protease de HIV/química , Protease de HIV/efeitos dos fármacos , Inibidores da Protease de HIV/farmacologia , HIV-1/efeitos dos fármacos , HIV-1/enzimologia , Humanos , Mutação , Conformação Proteica , Sulfonamidas/farmacologia
3.
J Biol Chem ; 272(44): 27582-8, 1997 Oct 31.
Artigo em Inglês | MEDLINE | ID: mdl-9346894

RESUMO

The immunophilin FKBP12 is one of the most abundant and conserved proteins in biology. It is the primary receptor for the immunosuppressant actions of the drug FK506 in whose presence FKBP12 binds to and inhibits calcineurin, disrupting interleukin formation in lymphocytes. The physiologic functions of FKBP12 are less clear, although the protein has been demonstrated to physiologically interact with the inositol 1,4,5-trisphosphate receptor (IP3R), the ryanodine receptor, and the type 1 transforming growth factor beta receptor. We now report that FKBP12 binds the IP3R at residues 1400-1401, a leucyl-prolyl dipeptide epitope that structurally resembles FK506. We further demonstrate that binding to IP3R at this site enables FKBP12 to interact with calcineurin, presumably to anchor the phosphatase to IP3R and modulate the receptor's phosphorylation status. We propose that FK506 promotes an FKBP12-calcineurin interaction by mimicking structurally similar dipeptide epitopes present within proteins that use FKBP12 to anchor calcineurin to the appropriate physiologic substrates.


Assuntos
Calcineurina/metabolismo , Canais de Cálcio/metabolismo , Proteínas de Transporte/metabolismo , Proteínas de Ligação a DNA/metabolismo , Proteínas de Choque Térmico/metabolismo , Leucina/metabolismo , Prolina/metabolismo , Receptores Citoplasmáticos e Nucleares/metabolismo , Tacrolimo/metabolismo , Sequência de Aminoácidos , Canais de Cálcio/química , Canais de Cálcio/genética , Receptores de Inositol 1,4,5-Trifosfato , Dados de Sequência Molecular , Ligação Proteica , Receptores Citoplasmáticos e Nucleares/química , Receptores Citoplasmáticos e Nucleares/genética , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Saccharomyces cerevisiae/genética , Proteínas de Ligação a Tacrolimo
4.
J Immunol ; 159(7): 3364-71, 1997 Oct 01.
Artigo em Inglês | MEDLINE | ID: mdl-9317135

RESUMO

IL-1 alpha and IL-1 beta bind to receptors termed the type I and type II IL-1 receptors. The type I IL-1 receptor is responsible for specific signaling, while the type II IL-1 receptor functions as a nonsignaling decoy receptor. To determine the effect of a defect in IL-1-mediated signaling, mice have been produced with a genetically disrupted type I IL-1 receptor gene. Mice lacking type I IL-1 receptors are of normal vigor and exhibit no overt phenotype. B cells from type I IL-1R-/- mice activated in vitro with anti-IgM do not proliferate in response to IL-1, but do so in response to IL-4. Injection of murine IL-1 alpha does not induce detectable serum IL-6 levels in type I IL-1R-/- mice, but equivalent levels are produced in response to LPS. Type I IL-1R-/- mice have normal serum Ig levels and generate equivalent primary and secondary Ab responses as wild-type mice. In response to LPS, acute phase protein mRNA induction are equivalent in type I IL-1R-/- and wild-type mice. Type I IL-1R-/- mice do not differ from control mice in susceptibility to either a lethal challenge with D-galactosamine plus LPS or high dose LPS. Interestingly, ICE-/-/type I IL-1R-/- double mutant mice are resistant to high dose LPS. Type I IL-1R-/- mice backcrossed to the C57BL/6 background were as equally resistant as wild-type mice to Listeria monocytogenes.


Assuntos
Camundongos Knockout/genética , Camundongos Knockout/imunologia , Receptores de Interleucina-1/deficiência , Receptores de Interleucina-1/genética , Proteínas de Fase Aguda/biossíntese , Animais , Caspase 1 , Cisteína Endopeptidases/deficiência , Cisteína Endopeptidases/genética , Suscetibilidade a Doenças , Feminino , Imunidade Inata , Interleucina-1/farmacologia , Interleucina-6/biossíntese , Interleucina-6/sangue , Lipopolissacarídeos/toxicidade , Listeriose/imunologia , Masculino , Camundongos , Camundongos Endogâmicos C57BL , Fenótipo , Receptores de Interleucina-1/fisiologia
5.
Biochemistry ; 36(31): 9340-8, 1997 Aug 05.
Artigo em Inglês | MEDLINE | ID: mdl-9235976

RESUMO

Infection by hepatitis C viruses (HCVs) is a serious medical problem with no broadly effective treatment available for the progression of chronic hepatitis. The catalytic activity of a viral serine protease located in the N-terminal one-third of nonstructural protein 3 (NS3) is required for polyprotein processing at four site-specific junctions. The three-dimensional crystal structure of the NS3-NS4A co-complex [Kim, J. L., Morgenstern, K. A., Lin, C., Fox, T., Dwyer, M. D., Landro, J. A., Chambers, S. P., Markland, W., Lepre, C. A., O'Malley, E. T., Harbeson, S. L., Rice, C. M., Murcko, M. A., Caron, P. R., & Thomson, J. A. (1996) Cell 87, 343-355] delineates a small hydrophobic region within the 54-residue NS4A protein that intercalates with and makes extensive contacts to the core of the protease. The current investigation addresses the mechanism of NS3 protease catalytic activation by NS4A utilizing a small synthetic NS4A peptide (residues 1678-1691 of the virus polyprotein sequence) and the recombinantly expressed protease domain of NS3. The addition of NS4A dramatically increased NS3 kcat and kcat/Km catalytic parameters when measured against small peptide substrates representing the different site-specific junctions of the polyprotein. The catalytic effect of natural and non-natural amino acid substitutions at the P1 position in a 5A/5B peptide substrate was investigated. NS3-NS4A demonstrated a marked catalytic preference for the cysteine residue commonly found in authentic substrates. The pH dependence of the NS3 hydrolysis reaction is not affected by the presence of NS4A. This result suggests that NS4A does not change the pKa values of the active site residues of NS3 protease. A steady state kinetic analysis was performed and indicated that the binding of NS4A and the peptide substrate occurs in an ordered fashion during the catalytic cycle, with NS4A binding first. Two distinct kinetic classes of peptidyl inhibitors based upon the 5A/5B cleavage site were identified. An NS4A-independent class is devoid of prime residues. A second class of inhibitors is NS4A-dependent and contains a natural or non-natural cyclic amino acid substituted for the commonly found P1' residue serine. These inhibitors display an up to 80-fold increase in affinity for NS3 protease in the presence of NS4A. Sequential truncation of prime and P residues from this inhibitor class demonstrated the fact that the P4' and P1' residues are crucial for potent inhibition. The selectivity of this NS4A effect is interpreted using a model of the 5A/5B decapeptide substrate bound to the active site of the NS3-NS4A structure.


Assuntos
Serina Endopeptidases/metabolismo , Proteínas não Estruturais Virais/metabolismo , Sequência de Aminoácidos , Cinética , Dados de Sequência Molecular , Peptídeos/química , Peptídeos/metabolismo , Serina Endopeptidases/química , Relação Estrutura-Atividade , Especificidade por Substrato , Proteínas não Estruturais Virais/química
6.
J Biol Chem ; 272(11): 7223-8, 1997 Mar 14.
Artigo em Inglês | MEDLINE | ID: mdl-9054418

RESUMO

Interleukin-1beta-converting enzyme (ICE) is a novel cysteine protease responsible for the cleavage of pre-interleukin-1beta (pre-IL-1beta) to the mature cytokine and a member of a family of related proteases (the caspases) that includes the Caenorhabditis elegans cell death gene product, CED-3. In addition to their sequence homology, these cysteine proteases display an unusual substrate specificity for peptidyl sequences with a P1 aspartate residue. We have examined the kinetics of processing pre-IL-1beta to the mature form by ICE and three of its homologs, TX, CPP-32, and CMH-1. Of the ICE homologs, only TX processes pre-IL-1beta, albeit with a catalytic efficiency 250-fold less than ICE itself. We also investigated the ability of these four proteases to process poly(ADP-ribose) polymerase, a DNA repair enzyme that is cleaved within minutes of the onset of apoptosis. Every caspase examined cleaves PARP, with catalytic efficiencies ranging from 2.3 x 10(6) M-1 s-1 for CPP32 to 1.0 x 10(3) M-1 s-1 for TX. In addition, we report kinetic constants for several reversible inhibitors and irreversible inactivators, which have been used to implicate one or more caspases in the apoptotic proteolysis cascade. Ac-Asp-Glu-Val-Asp aldehyde (DEVD-CHO) is a potent inhibitor of CPP-32 with a Ki value of 0.5 nM, but is also potent as inhibitor of CMH-1 (Ki = 35 nM) and ICE (Ki = 15 nM). The x-ray crystal structure of DEVD-CHO complexed to ICE presented here reveals electrostatic interactions not present in the Ac-YVAD-CHO co-complex structure (Wilson, K. P., Black, J.-A. F., Thomson, J. A., Kim, E. E., Griffith, J. P., Navia, M. A., Murcko, M. A., Chambers, S. P., Aldape, R. A., Raybuck, S. A., and Livingston, D. J. (1994) Nature 370, 270-275), accounting for the surprising potency of this inhibitor against ICE.


Assuntos
Cisteína Endopeptidases/metabolismo , Animais , Caenorhabditis elegans , Caspase 1 , Cristalografia por Raios X , Inibidores Enzimáticos/metabolismo , Cinética , Proteínas Recombinantes/metabolismo , Especificidade por Substrato
7.
J Immunol ; 158(4): 1818-24, 1997 Feb 15.
Artigo em Inglês | MEDLINE | ID: mdl-9029121

RESUMO

IL-1 beta-converting enzyme (ICE) cleaves pro-IL-1 beta to the mature, released form. Although other proteases can process pro-IL-1 beta, ICE-deficient (ICE -/-) mice do not release mature IL-1 beta in response to endotoxin. The purpose of our study was to investigate the response of ICE -/- mice in two models of local inflammation, turpentine-induced tissue damage and zymosan-induced peritonitis. No differences were observed in the development of the systemic acute phase response after turpentine administration between wild-type and ICE -/- mice, but this response was completely impaired in IL-1 beta -/- mice. Accordingly, the levels of mature IL-1 beta produced in response to turpentine did not differ between wild-type and ICE -/- mice. In contrast, following zymosan-induced peritonitis, the levels of mature IL-1 beta were significantly lower in ICE -/- mice. This was associated with a 50% decrease in cellular infiltrate in ICE -/- mice compared with that in wild-type controls. The reduced production of zymosan-induced mature IL-1 beta in ICE -/- mice was also observed from cultured peritoneal or spleen cells. Our results demonstrate that in turpentine-induced tissue necrosis, precursor IL-1 beta is processed by non-ICE proteases, but in complement-mediated inflammation, ICE participates in the processing of the IL-1 beta precursor.


Assuntos
Cisteína Endopeptidases/deficiência , Cisteína Endopeptidases/genética , Inflamação/enzimologia , Inflamação/imunologia , Animais , Apolipoproteínas/biossíntese , Peso Corporal/efeitos dos fármacos , Peso Corporal/genética , Peso Corporal/imunologia , Caspase 1 , Movimento Celular/efeitos dos fármacos , Movimento Celular/imunologia , Citocinas/sangue , Inflamação/genética , Injeções Subcutâneas , Interleucina-1/biossíntese , Interleucina-1/sangue , Interleucina-1/deficiência , Camundongos , Camundongos Mutantes , Proteína Amiloide A Sérica/biossíntese , Terebintina/administração & dosagem , Zimosan/administração & dosagem , Zimosan/farmacologia
8.
J Cell Biochem ; 64(1): 19-26, 1997 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-9015750

RESUMO

Interleukin-1 beta-converting enzyme (ICE) is a cysteine protease responsible for proteolytic activation of the biologically inactive interleukin-1 beta precursor to the proinflammatory cytokine. ICE and homologous proteases also appear to mediate intracellular protein degradation during programmed cell death. Inhibition of ICE is a new antiinflammatory strategy being explored by the design of both reversible inhibitors and irreversible inactivators of the enzyme. Such compounds are capable of blocking release of interleukin-1 beta from human monocytes. ICE inhibitors that cross react against multiple ICE homologs can also block apoptosis in diverse cell types. ICE inhibitors impart protection in vivo from endotoxin-induced sepsis and collagen-induced polyarthritis in rodent models. Further optimization of the current generation of peptidyl ICE inhibitors will be required to produce agents suitable for administration in chronic inflammatory and neurodegenerative diseases.


Assuntos
Cisteína Endopeptidases/efeitos dos fármacos , Cisteína Endopeptidases/metabolismo , Inibidores de Cisteína Proteinase/classificação , Inibidores de Cisteína Proteinase/farmacologia , Animais , Apoptose/efeitos dos fármacos , Caspase 1 , Cisteína Endopeptidases/química , Inibidores de Cisteína Proteinase/química , Citocinas/efeitos dos fármacos , Citocinas/metabolismo , Previsões , Humanos
9.
Science ; 275(5297): 206-9, 1997 Jan 10.
Artigo em Inglês | MEDLINE | ID: mdl-8999548

RESUMO

The interleukin-1beta (IL-1beta) converting enzyme (ICE) processes the inactive IL-1beta precursor to the proinflammatory cytokine. ICE was also shown to cleave the precursor of interferon-gamma inducing factor (IGIF) at the authentic processing site with high efficiency, thereby activating IGIF and facilitating its export. Lipopolysaccharide-activated ICE-deficient (ICE-/-) Kupffer cells synthesized the IGIF precursor but failed to process it into the active form. Interferon-gamma and IGIF were diminished in the sera of ICE-/- mice exposed to Propionibacterium acnes and lipopolysaccharide. The lack of multiple proinflammatory cytokines in ICE-/- mice may account for their protection from septic shock.


Assuntos
Caspases , Cisteína Endopeptidases/metabolismo , Citocinas/metabolismo , Células de Kupffer/metabolismo , Animais , Células COS , Caspase 1 , Caspase 3 , Caspases Iniciadoras , Meios de Cultivo Condicionados , Citocinas/sangue , Citocinas/farmacologia , Humanos , Interferon gama/biossíntese , Interferon gama/sangue , Interleucina-18 , Lipopolissacarídeos/farmacologia , Camundongos , Precursores de Proteínas/metabolismo , Processamento de Proteína Pós-Traducional , Proteínas Recombinantes/metabolismo , Proteínas Recombinantes/farmacologia , Baço/citologia , Baço/metabolismo , Transfecção
11.
J Biol Chem ; 271(30): 17979-85, 1996 Jul 26.
Artigo em Inglês | MEDLINE | ID: mdl-8663409

RESUMO

Passage of human immunodeficiency virus type-1 (HIV-1) in T-lymphocyte cell lines in the presence of increasing concentrations of the hydroxylethylamino sulfonamide inhibitor VX-478 or VB-11328 results in sequential accumulation of mutations in HIV-1 protease. We have characterized recombinant HIV-1 proteases that contain these mutations either individually (L10F, M46I, I47V, I50V) or in combination (the double mutant L10F/I50V and the triple mutant M46I/I47V/I50V). The catalytic properties and affinities for sulfonamide inhibitors and other classes of inhibitors were determined. For the I50V mutant, the efficiency (kcat/Km) of processing peptides designed to mimic cleavage junctions in the HIV-1 gag-pol polypeptide was decreased up to 25-fold. The triple mutant had a 2-fold higher processing efficiency than the I50V single mutant for peptide substrates with Phe/Pro and Tyr/Pro cleavage sites, suggesting that the M46I and I47V mutations are compensatory. The effects of mutation on processing efficiency were used in conjunction with the inhibition constant (Ki) to evaluate the advantage of the mutation for viral replication in the presence of drug. These analyses support the virological observation that the addition of M46I and I47V mutations on the I50V mutant background enables increased survival of the HIV-1 virus as it replicates in the presence of VX-478. Crystal structures and molecular models of the active site of the HIV-1 protease mutants suggest that changes in the active site can selectively affect the binding energy of inhibitors with little corresponding change in substrate binding.


Assuntos
Protease de HIV/genética , HIV-1/enzimologia , HIV-1/genética , Mutação , Sequência de Aminoácidos , Sítios de Ligação , Carbamatos , Furanos , Variação Genética , Protease de HIV/efeitos dos fármacos , Inibidores da Protease de HIV/farmacologia , Hidrólise , Indinavir , Isoquinolinas/farmacologia , Cinética , Modelos Moleculares , Dados de Sequência Molecular , Oligopeptídeos/metabolismo , Piridinas/farmacologia , Quinolinas/farmacologia , Saquinavir , Seleção Genética , Especificidade por Substrato , Sulfonamidas/farmacologia
12.
Biochemistry ; 35(22): 6990-7, 1996 Jun 04.
Artigo em Inglês | MEDLINE | ID: mdl-8679523

RESUMO

The objective of this work was to contribute to the understanding of mechanisms for IMPDH inhibition. We over-expressed hamster type II IMPDH in Escherichia coli, purified the protein to apparent homogeneity, and used capillary electrophoresis to quantify enzyme turnover events accompanying inhibition by mycophenolic acid (MPA). We dissected two convergent pathways leading to MPA-inhibition; a rapid "forward" pathway beginning with substrates and linked to enzyme catalysis, and a slower "reverse" pathway apparently not involving catalysis. MPA-inhibition occurred rapidly in the forward direction by interrupting the enzyme turnover cycle, after IMP and NAD+ binding, after hydride transfer, and after NADH release. Slow inhibition, without substrate turnover, was achieved by incubating free enzyme with excess XMP and MPA. We propose that mycophenolic acid inhibits IMPDH by trapping a transient covalent product of the hydride transfer reaction (IMPDH approximately XMP*) before a final hydrolysis step that precedes XMP and enzyme release in the forward reaction pathway. Understanding the ligand occupancy of the protein has also proven important for producing homogeneous, chemically defined complexes for structural studies. IMPDH samples inhibited by MPA in the forward and reverse pathways yielded similar, high-quality crystals that are currently undergoing X-ray diffraction analyses.


Assuntos
Inibidores Enzimáticos/farmacologia , IMP Desidrogenase/antagonistas & inibidores , Ácido Micofenólico/farmacologia , Animais , Sequência de Bases , Cricetinae , Cristalização , Primers do DNA/química , Eletroforese Capilar , Escherichia coli/genética , IMP Desidrogenase/química , IMP Desidrogenase/metabolismo , Inosina Monofosfato/metabolismo , Cinética , Modelos Químicos , Dados de Sequência Molecular , NAD/metabolismo , Ligação Proteica , Proteínas Recombinantes/metabolismo
13.
Cytokine ; 8(5): 377-86, 1996 May.
Artigo em Inglês | MEDLINE | ID: mdl-8726666

RESUMO

To IL-1 beta is a principal mediator in the pathogenesis of inflammatory disease. The IL-1 beta-converting enzyme (ICE), a novel cysteine protease, is required for processing of the 31 kDa IL-1 beta precursor to generate the 17 kDa proinflammatory mature form. We investigated the effect of two irreversible peptidyl ICE inhibitors, VE-13,045 and VE-16,084, on IL-1 production in vitro and in vivo in acute and chronic inflammatory disease models. In vitro, VE-13,045 and VE-16084 inhibited IL-1 beta secretion by LPS-stimulated human adherent mononuclear cells (IC50's of 0.4 microM and 2.0 microM, respectively) and murine splenic monocytes (IC50's of 10 microM and 1.3 microM, respectively). Both VE-13,045 and VE-16,084 also inhibited LPS stimulated IL-1 alpha secretion, although with reduced potency. In vivo, a single intraperitoneal dose of VE-13,045 (50 mg/kg) administered to mice 60 to 75 minutes after a 40 mg/kg LPS challenge significantly reduced IL-1 beta serum levels by 50 to 70%. In the DBA/1J mouse model of Type II collagen-induced arthritis, prophylactic treatment with VE-13,045 (50 and 100 mg/kg/day) significantly delayed the onset of inflammation, with a 60% overall reduction in disease severity. VE-13,045 was more effective than either indomethacin (2 mg/kg/day) or methyl prednisolone (10 mg/kg/day). VE-13,045 was also effective in reducing inflammation and progression of arthritis when administered to mice with established disease. Histological analysis of wrist joints showed a reduction in synovial membrane damage, inflammatory cell infiltration and fibrosis, and cartilage erosion in VE-13,045-treated animals. This is the first demonstration of efficacy for an ICE inhibitor in a chronic disease model and suggests that ICE is an important target for design of anti-inflammatory or disease modifying drugs.


Assuntos
Artrite/tratamento farmacológico , Colágeno/toxicidade , Inibidores de Cisteína Proteinase/administração & dosagem , Interleucina-1/sangue , Oligopeptídeos/administração & dosagem , Animais , Artrite/induzido quimicamente , Artrite/metabolismo , Células Cultivadas , Modelos Animais de Doenças , Humanos , Camundongos
14.
Protein Eng ; 9(2): 173-80, 1996 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-9005438

RESUMO

The 12 kDa FK506-binding protein FKBP12 is a cis-trans peptidyl-prolyl isomerase that binds the macrolides FK506 and rapamycin. We have examined the role of the binding pocket residues of FKBP12 in protein-ligand interactions by making conservative substitutions of 12 of these residues by site-directed mutagenesis. For each mutant FKBP12, we measured the affinity for FK506 and rapamycin and the catalytic efficiency in the cis-frans peptidyl-prolyl isomerase reaction. The mutation of Trp59 or Phe99 generates an FKBP12 with a significantly lower affinity for FK506 than wild-type protein. Tyr26 and Tyr82 mutants are enzymatically active, demonstrating that hydrogen bonding by these residues is not required for catalysis of the cis-trans peptidyl-prolyl isomerase reaction, although these mutations alter the substrate specificity of the enzyme. We conclude that hydrophobic interactions in the active site dominate in the stabilization of FKBP12 binding to macrolide ligands and to the twisted-amide peptidyl-prolyl substrate intermediate.


Assuntos
Isomerases de Aminoácido/metabolismo , Proteínas de Transporte/química , Proteínas de Transporte/genética , Proteínas de Transporte/metabolismo , Proteínas de Ligação a DNA/química , Proteínas de Ligação a DNA/genética , Proteínas de Choque Térmico/química , Proteínas de Choque Térmico/genética , Tacrolimo/metabolismo , Isomerases de Aminoácido/genética , Sítios de Ligação/genética , Cristalografia por Raios X , Primers do DNA , Proteínas de Ligação a DNA/metabolismo , Proteínas de Choque Térmico/metabolismo , Imunossupressores/farmacologia , Cinética , Macrolídeos/metabolismo , Modelos Moleculares , Estrutura Molecular , Mutagênese Sítio-Dirigida/genética , Peptidilprolil Isomerase , Polienos/metabolismo , Ligação Proteica , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Sirolimo , Espectrometria de Fluorescência , Especificidade por Substrato , Proteínas de Ligação a Tacrolimo
15.
J Biomol NMR ; 8(1): 67-76, 1996 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-21136324

RESUMO

The ability of time-averaged restrained molecular dynamics (TARMD) to escape local low-energy conformations and explore conformational space is compared with conventional simulated-annealing methods. Practical suggestions are offered for performing TARMD calculations with ligand-receptor systems, and are illustrated for the complex of the immunosuppressant FK506 bound to Q50R,A95H,K98I triple mutant FKBP-13. The structure of (13)C-labeled FK506 bound to triple-mutant FKBP-13 was determined using a set of 87 NOE distance restraints derived from HSQC-NOESY experiments. TARMD was found to be superior to conventional simulated-annealing methods, and produced structures that were conformationally similar to FK506 bound to wild-type FKBP-12. The individual and combined effects of varying the NOE restraint force constant, using an explicit model for the protein binding pocket, and starting the calculations from different ligand conformations were explored in detail.

16.
J Biol Chem ; 270(32): 18715-8, 1995 Aug 11.
Artigo em Inglês | MEDLINE | ID: mdl-7642516

RESUMO

The proteolytic cleavage of poly(ADP-ribose) polymerase (PARP) is an early biochemical event, which occurs during apoptosis. A recent study suggested that PARP cleavage can be mediated by a novel cytosolic protease (prICE) that resembles interleukin-1 beta converting enzyme (ICE), but cannot be mediated by ICE itself (Lazebnik, Y.A., Kaufmann, S.H., Desnoyers, S., Poirier, G.G., and Earnshaw, W.C. (1994) Nature 371, 346-347). We have used a COS cell co-transfection assay to investigate if ICE or any known ICE-like protease is active in PARP cleavage within the cell. Here we report that co-expression of human PARP with human ICE, or the ICE homologs TX and Nedd-2, resulted in a cleavage of PARP identical to that observed in apoptotic cells. Experiments with purified recombinant human ICE indicated that PARP polypeptide can be specifically cleaved in vitro by ICE in a time- and enzyme concentration-dependent manner. PARP cleavage, however, requires a 50-100-fold higher ICE concentration than does processing of the interleukin-1 beta precursor at an equivalent substrate concentration. The abilities of ICE, TX, and Nedd-2, when expressed at high intracellular concentrations, to cleave PARP are consistent with their induction of apoptosis in transfected cells.


Assuntos
Caspases , Cisteína Endopeptidases/farmacologia , Poli(ADP-Ribose) Polimerases/metabolismo , Proteínas/farmacologia , Sequência de Aminoácidos , Sequência de Bases , Caspase 1 , Caspase 2 , Caspases Iniciadoras , Células Cultivadas , Humanos , Dados de Sequência Molecular
17.
J Biol Chem ; 270(32): 18935-40, 1995 Aug 11.
Artigo em Inglês | MEDLINE | ID: mdl-7642551

RESUMO

The 12- and 13-kDa FK506 binding proteins (FKBP12 and FKBP13) are cis-trans peptidyl-prolyl isomerases that bind the macrolides FK506 (Tacrolimus) and rapamycin (Sirolimus). The FKBP12.FK506 complex is immunosuppressive, acting as an inhibitor of the protein phosphatase calcineurin. We have examined the role of the key surface residues of FKBP12 and FKBP13 in calcineurin interactions by generating substitutions at these residues by site-directed mutagenesis. All mutants are active catalysts of the prolyl isomerase reaction, and bind FK506 or rapamycin with high affinity. Mutations at FKBP12 residues Asp-37, Arg-42, His-87, and Ile-90 decrease calcineurin affinity of the mutant FKBP12.FK506 complex by as much as 2600-fold in the case of I90K. Replacement of three FKBP13 surface residues (Gln-50, Ala-95, and Lys-98) with the corresponding homologous FKBP12 residues (Arg-42, His-87, and Ile-90) generates an FKBP13 variant that is equivalent to FKBP12 in its affinity for FK506, rapamycin, and calcineurin. These results confirm the role of two loop regions of FKBP12 (residues 40-44 and 84-91) as part of the effector face that interacts with calcineurin.


Assuntos
Proteínas de Ligação a Calmodulina/metabolismo , Proteínas de Transporte/metabolismo , Proteínas de Ligação a DNA/metabolismo , Proteínas de Choque Térmico/metabolismo , Fosfoproteínas Fosfatases/metabolismo , Sequência de Aminoácidos , Calcineurina , Proteínas de Transporte/química , Proteínas de Transporte/isolamento & purificação , Proteínas de Ligação a DNA/química , Proteínas de Ligação a DNA/isolamento & purificação , Proteínas de Choque Térmico/química , Proteínas de Choque Térmico/isolamento & purificação , Humanos , Dados de Sequência Molecular , Mutagênese Sítio-Dirigida , Proteínas de Ligação a Tacrolimo
18.
Anal Biochem ; 229(1): 48-53, 1995 Jul 20.
Artigo em Inglês | MEDLINE | ID: mdl-8533894

RESUMO

Enzyme-based assays are commonly employed in clinical and pharmaceutical laboratories to aid in quantitation of organic substances. Many enzyme assays are tedious, requiring the addition of reagents at multiple time intervals. The HPLC-based analysis of reaction products requires an additional step of vialing the samples and placing them in the autosampler. Such time-consuming, repetitive procedures are ideally suited for automation. We automated an HIV protease assay for the purposes of screening compounds as inhibitors of HIV protease and determining inhibition constants. Automation was accomplished by interfacing a robotic sample processor from a Gilson Model 232/401 biocompatible automatic sample processor and injector, with a Hewlett Packard HPLC. We used this configuration to automate the following steps: (a) preparation of serial dilutions of inhibitor, (b) enzyme assay setup, and (c) quantitation of products of enzyme assays. The resulting automated method produced inhibition constants that were of comparable accuracy and precision to those determined by manual methods.


Assuntos
Cromatografia Líquida de Alta Pressão/métodos , Inibidores da Protease de HIV/farmacologia , HIV-1/efeitos dos fármacos , HIV-1/enzimologia , Sequência de Aminoácidos , Automação , Cromatografia Líquida de Alta Pressão/estatística & dados numéricos , Estudos de Avaliação como Assunto , Protease de HIV/metabolismo , Humanos , Cinética , Dados de Sequência Molecular , Oligopeptídeos/química , Pepstatinas/farmacologia , Reprodutibilidade dos Testes , Especificidade por Substrato
19.
Acta Crystallogr D Biol Crystallogr ; 51(Pt 4): 522-8, 1995 Jul 01.
Artigo em Inglês | MEDLINE | ID: mdl-15299839

RESUMO

We have synthesized a series of non-macrocyclic ligands to FKBP12 that are comparable in binding potency and peptidyl prolyl isomerase (PPIase) inhibition to FK506 itself. We have also solved the structure of one of these ligands in complex with FKBP12, and have compared that structure to the FK506-FKBP12 complex. Consistent with the observed inhibitory equipotency of these compounds, we observe a strong similarity in the conformation of the two ligands in the region of the protein that mediates PPIase activity. Our compounds, however, are not immunosuppressive. In the FKBP12-FK506 complex, a significant portion of the FK506 ligand, its 'effector domain', projects beyond the envelope of the binding protein in a manner that is suggestive of a potential interaction with a second protein, the calcium-dependent phosphatase, calcineurin, whose inhibition by the FKBP 12-FK506 complex interrupts the T-cell activation events leading to immunosuppression. In contrast, our compounds bind within the surface envelope of FKBP12, and induce significant changes in the structure of the FKBP12 protein which may also affect calcineurin binding indirectly.

20.
EMBO J ; 14(9): 1923-31, 1995 May 01.
Artigo em Inglês | MEDLINE | ID: mdl-7743999

RESUMO

Interleukin-1 beta converting enzyme (ICE) is composed of 10' (p10) and 20 kDa (p20) subunits, which are derived from a common 45 kDa precursor. Recent crystallographic studies have shown that ICE exists as a tetramer (p20/p10)2 in the crystal lattice. We provide evidence that the p10 and p20 subunits of ICE associate as oligomers in transfected COS cells. Using intragenic complementation, we show that the activity of a p10/p10 interface mutant defective in autoprocessing can be restored by co-expression with active site ICE mutants. Different active site mutants can also complement each other by oligomerization to form active ICE. These studies indicate that ICE precursor polypeptides may associate in different quaternary structures and that oligomerization is required for autoprocessing. Furthermore, integenic complementation of active site mutants of ICE and an ICE homolog restores autoprocessing activity, suggesting that hetero-oligomerization occurs between ICE homologs.


Assuntos
Cisteína Endopeptidases/metabolismo , Sequência de Aminoácidos , Animais , Sequência de Bases , Sítios de Ligação/genética , Caspase 1 , Linhagem Celular , Cisteína Endopeptidases/química , Cisteína Endopeptidases/genética , DNA Complementar/genética , Teste de Complementação Genética , Humanos , Modelos Moleculares , Dados de Sequência Molecular , Mutação , Conformação Proteica , Processamento de Proteína Pós-Traducional , Transfecção
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