Variable Number Tandem Repeat (VNTR) analysis reveals genetic diversity within Mycoplasma mycoides mycoides small colony isolates from Nigeria.

A Variable Number Tandem Repeat (VNTR) analysis was conducted on thirteen (13) M. mycoides mycoides Small Colony isolates from Nigeria using Tandem Repeat (TR) 34 which is a predicted lipoprotein located within the hypothetical protein MAG6170. The analysis revealed diversity within the M. mycoides mycoides Small Colony isolates with five different VNTR types indicated. Some correlation was determined between the VNTR types and their geographical origin. VNTR analysis may represent a useful, rapid first-line test for use in molecular epidemiological analysis of M. mycoides mycoides Small Colony for possible outbreak tracing and disease control.

Surveillance for African swine fever in Nigeria, 2006-2009.

African swine fever (ASF) has had significant economic and social impact in Nigeria since 1997. However, there has been no effective national response to bring it under control. In this report, we confirm that ASF is still prevalent and widespread in Nigeria. Results from both serosurveillance and virological analyses indicated that ASF is present in most of the agro-ecological zones of the country. Nine per cent (9%) of serum samples and 48% of tissue samples were positive for ASF virus antibody and genome, respectively. Areas with high pig-related activities (marketing, consumption and farming) have higher prevalences compared with areas with less pig activities. Farm-gate buyers, marketing systems and transport of untested pigs within the country assist with the circulation of the virus. Only by putting in place a comprehensive routine surveillance and testing system, reorganizing the market and transportation systems for pigs, implementing on-farm bio-security protocols and considering the option of compensation will it be possible to achieve a significant reduction in ASF prevalence in Nigeria.

Molecular characterization and epidemiology of the highly pathogenic avian influenza H5N1 in Nigeria.

Avian influenza caused infection and spread throughout Nigeria in 2006. Carcass samples (lung, liver, spleen, heart, trachea and intestine) from the different regions of Nigeria were processed for virus isolation. Infective allantoic fluids were tested for avian influenza viruses (AIV) and Newcastle disease virus using monospecific antisera. Thirty-five isolates were generated and characterized molecularly using the haemagglutinin gene. The molecular analysis indicated that different sublineages of the highly pathogenic avian influenza (HPAI) H5N1 viruses spread throughout Nigeria. We compared the Nigerian isolates with others from Africa and results indicated close similarities between isolates from West Africa and Sudan. Some of the analysed viruses showed genetic drift, and the implications of these for future epidemiology and ecology of avian influenza in Africa require further evaluation. The spread of primary outbreaks was strongly linked to trade (legal and illegal), live bird markets, inappropriate disposal, and poorly implemented control measures. No strong correlation existed between wild birds and HPAI H5N1 in Nigeria.

The sensitivity to antimicrobial agents of species of Yersinia isolated from cattle and pigs in Nigeria.

Fourteen isolates of yersiniae belonging to three species isolated from cattle and pigs were tested for their sensitivity to 12 antimicrobial agents by the tube dilution technique. All the isolates were sensitive to gentamicin and 93.0%, 93.0%, 85.7% and 85.7% sensitive to tetracycline, nitrofurantoin, chloramphenicol and sulphamethoxazole-trimethoprim, respectively. There were no consistent differences in the rates and patterns of resistance based on source, species and serotypes of organisms.

Occurrence of virulence markers in species of Yersinia isolated from animals in Nigeria.

Fourteen strains of Yersinia species isolated from apparently healthy pigs and cattle in Nigeria were screened for four virulence markers using six test systems. These were two in vitro assays, namely, calcium dependency and autoagglutination, both at 37 degrees C, the Serény test in guinea-pigs and the detection of heat-stable enterotoxin (ST) by the rabbit ileal loop test, the ligated intestine test in pigs and the infant mouse system. Seven of the 14 strains of Yersinia were positive for one or more of these tests. Six of nine strains of Y. enterocolitica and one of four Y. intermedia were positive in one or more tests. The only strain of Y. frederiksenii isolated was negative in all six test systems. All three strains of Y. enterocolitica, serotype 0:8 and the only serotype 0:3 isolated were positive in one or more tests. However, only two of five strains of Y. enterocolitica serotype 0:12, 26, the most frequently encountered, were positive. A good correlation was observed between test results of calcium dependency, autoagglutination and Serény assays. The results indicate that cattle and pigs have the potential to transmit virulent strains of Y. enterocolitica to human beings in Nigeria.

A survey for Yersinia enterocolitica in water from ponds, streams and wells in Northern Nigeria.

Water samples obtained from 250 wells, 118 ponds and 34 streams around Zaria, Nigeria were cultured for Yersinia enterocolitica. All samples tested were negative for the microorganism. Water samples from the three sources experimentally inoculated with three strains of Yersinia enterocolitica allowed an initial multiplication followed by a progressive decline in population with increase in population paralleling increase in ambient temperature. Well water was most supportive of the organism but strain variability in survival was observed in water from the three sources. Stream, pond and well water may not be important in the epidemiology of Y. enterocolitica infections in animals and human beings in Northern Nigeria.

Biochemical and serological identification of strains of Haemophilus pleuropneumoniae.

Eighteen field isolates of Haemophilus pleuropneumoniae were studied biochemically and serotyped using the complement fixation test (CFT), agglutination test and the immunodiffusion test. Three biochemical tests (V-dependency, CAMP-reaction and urease activity) were found to be very useful for the biochemical characterization of the H. pleuropneumoniae. Haemolysis on blood agar plates, although present, was not sufficiently pronounced in all cases to warrant absolute dependence on this characteristic. Serological typing revealed the isolates belong to Serotypes 1 and 5. The immunodiffusion test proved to be the most serotype specific, while a marked cross-reaction was observed with the CFT.

Evaluation of the complement fixation test for the diagnosis of pleuropneumonia of swine caused by Haemophilus pleuropneumoniae.

Evaluation of diagnostic sensitivity and specificity was based on test results of 346 sera from pigs known to be infected and 139 sera from pigs known not to be infected. All sera were tested with a monospecific antigen (serotype 1) and a polyspecific antigen (serotypes 1-5). The sensitivity of the polyspecific antigen was approximately 85% at serum dilution 1:2 and was significantly higher than the monospecific antigen at all serum dilution levels. The specificity of the two antigen preparations was not significantly different at any dilution and increased from approximately 78% to 1:2 to 100% at 1:128. When pigs from herds with unknown incidence of infection were studied, it was found that a high proportion seroconverted, presumably as a response to subclinical infection. However, the antibody titres waned rapidly. This indicated that seroreaction expresses current or recent infection. Thus, the complement fixation test provides a reliable means of diagnosing pleuropneumonia of pigs and might be useful as a tool to control this disease.

Cell counts in bulked milk supplies from dairy farms of northern Nigeria.

Somatic cells in 596 milk samples collected from bulked supplies of 3 northern Nigeria dairy farms were counted by an electronic method following a standard method for the preparation of the milk samples. Mean somatic cell counts per ml indicating low level of infection were 158,597, 166,742 and 155,032 for the 3 farms, without any significant differences. Mean somatic cell counts per ml indicating herd mastitis averaged 354,768 +/- 66,348 and the pathogenic organisms isolated were Escherichia coli and Staphylocucus aureus. Counts useful for future regular monitoring of somatic cells in bulked milk supplies in northern Nigeria are presented.