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1.
Anal Chem ; 93(27): 9383-9389, 2021 07 13.
Artigo em Inglês | MEDLINE | ID: mdl-34192456

RESUMO

This paper describes the design, fabrication, and feasibility of paper-based optode devices (PODs) for sensing potassium selectively in biological fluids. PODs operate in exhaustive mode and integrate with a handheld, smartphone-connected optical reader. This integrated measuring system provides significant advantages over traditional optode membranes and other paper-based designs, by obtaining a linear optical response to potassium concentration via a simple, stackable design and by harnessing a smartphone to provide an easy-to-use interface, thus enabling remote monitoring of diseases.


Assuntos
Potássio , Smartphone
2.
Methods Mol Biol ; 1729: 337-343, 2018.
Artigo em Inglês | MEDLINE | ID: mdl-29429102

RESUMO

CheY is a response regulator of bacterial chemotaxis that is activated by phosphorylation of a conserved aspartate residue. However, studies of CheY-phosphate have proven challenging due to rapid hydrolysis of the aspartyl-phosphate in vitro. To combat this issue, we have designed a stable analog suitable for structural and functional studies. Herein, we describe a method for the chemical modification of Thermotoga maritima CheY to produce a phospho-analog designated as phosphono-CheY. Our modification produces a stable analog in the constitutively active form that enables the study of signal transfer to the downstream target.


Assuntos
Proteínas Quimiotáticas Aceptoras de Metil/síntese química , Thermotoga maritima/metabolismo , Proteínas de Bactérias/síntese química , Proteínas de Bactérias/química , Quimiotaxia , Ativação Enzimática , Proteínas Quimiotáticas Aceptoras de Metil/química , Fosforilação , Estabilidade Proteica , Transdução de Sinais , Thermotoga maritima/química
3.
Protein Sci ; 26(8): 1547-1554, 2017 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-28440031

RESUMO

Phosphorylation of CheY promotes association with the flagellar motor and ultimately controls the directional bias of the motor. However, biochemical studies of activated CheY-phosphate have been challenging due to the rapid hydrolysis of the aspartyl-phosphate in vitro. An inert analog of Tm CheY-phosphate, phosphono-CheY, was synthesized by chemical modification and purified by cation-exchange chromatography. Changes in HPLC retention times, chemical assays for phosphate and free thiol, and mass spectrometry experiments demonstrate modification of Cys54 with a phosphonomethyl group. Additionally, a crystal structure showed electron density for the phosphonomethyl group at Cys54, consistent with a modification at that position. Subsequent biochemical experiments confirmed that protein crystals were phosphono-CheY. Isothermal titration calorimetry and fluorescence polarization binding assays demonstrated that phosphono-CheY bound a peptide derived from FliM, a native partner of CheY-phosphate, with a dissociation constant of ∼29 µM, at least sixfold more tightly than unmodified CheY. Taken together these results suggest that Tm phosphono-CheY is a useful and unique analog of Tm CheY-phosphate.


Assuntos
Proteínas de Bactérias/química , Proteínas Quimiotáticas Aceptoras de Metil/química , Organofosfonatos/química , Peptídeos/química , Thermotoga maritima/química , Sequência de Aminoácidos , Ácido Aspártico/análogos & derivados , Ácido Aspártico/química , Ácido Aspártico/metabolismo , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Sítios de Ligação , Quimiotaxia/fisiologia , Clonagem Molecular , Cristalografia por Raios X , Escherichia coli/genética , Escherichia coli/metabolismo , Flagelos/química , Flagelos/metabolismo , Expressão Gênica , Cinética , Proteínas Quimiotáticas Aceptoras de Metil/genética , Proteínas Quimiotáticas Aceptoras de Metil/metabolismo , Modelos Moleculares , Organofosfonatos/metabolismo , Peptídeos/genética , Peptídeos/metabolismo , Fosforilação , Ligação Proteica , Conformação Proteica em alfa-Hélice , Conformação Proteica em Folha beta , Engenharia de Proteínas , Domínios e Motivos de Interação entre Proteínas , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Thermotoga maritima/genética , Thermotoga maritima/metabolismo
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