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1.
J Chem Phys ; 160(22)2024 Jun 14.
Artigo em Inglês | MEDLINE | ID: mdl-38857173

RESUMO

The software for chemical interaction networks (SCINE) project aims at pushing the frontier of quantum chemical calculations on molecular structures to a new level. While calculations on individual structures as well as on simple relations between them have become routine in chemistry, new developments have pushed the frontier in the field to high-throughput calculations. Chemical relations may be created by a search for specific molecular properties in a molecular design attempt, or they can be defined by a set of elementary reaction steps that form a chemical reaction network. The software modules of SCINE have been designed to facilitate such studies. The features of the modules are (i) general applicability of the applied methodologies ranging from electronic structure (no restriction to specific elements of the periodic table) to microkinetic modeling (with little restrictions on molecularity), full modularity so that SCINE modules can also be applied as stand-alone programs or be exchanged for external software packages that fulfill a similar purpose (to increase options for computational campaigns and to provide alternatives in case of tasks that are hard or impossible to accomplish with certain programs), (ii) high stability and autonomous operations so that control and steering by an operator are as easy as possible, and (iii) easy embedding into complex heterogeneous environments for molecular structures taken individually or in the context of a reaction network. A graphical user interface unites all modules and ensures interoperability. All components of the software have been made available as open source and free of charge.

2.
J Chem Phys ; 158(8): 084803, 2023 Feb 28.
Artigo em Inglês | MEDLINE | ID: mdl-36859110

RESUMO

Quantum chemical calculations on atomistic systems have evolved into a standard approach to studying molecular matter. These calculations often involve a significant amount of manual input and expertise, although most of this effort could be automated, which would alleviate the need for expertise in software and hardware accessibility. Here, we present the AutoRXN workflow, an automated workflow for exploratory high-throughput electronic structure calculations of molecular systems, in which (i) density functional theory methods are exploited to deliver minimum and transition-state structures and corresponding energies and properties, (ii) coupled cluster calculations are then launched for optimized structures to provide more accurate energy and property estimates, and (iii) multi-reference diagnostics are evaluated to back check the coupled cluster results and subject them to automated multi-configurational calculations for potential multi-configurational cases. All calculations are carried out in a cloud environment and support massive computational campaigns. Key features of all components of the AutoRXN workflow are autonomy, stability, and minimum operator interference. We highlight the AutoRXN workflow with the example of an autonomous reaction mechanism exploration of the mode of action of a homogeneous catalyst for the asymmetric reduction of ketones.

3.
J Chem Phys ; 153(24): 244113, 2020 Dec 28.
Artigo em Inglês | MEDLINE | ID: mdl-33380106

RESUMO

The tailored coupled cluster (TCC) approach is a promising ansatz that preserves the simplicity of single-reference coupled cluster theory while incorporating a multi-reference wave function through amplitudes obtained from a preceding multi-configurational calculation. Here, we present a detailed analysis of the TCC wave function based on model systems, which require an accurate description of both static and dynamic correlation. We investigate the reliability of the TCC approach with respect to the exact wave function. In addition to the error in the electronic energy and standard coupled cluster diagnostics, we exploit the overlap of TCC and full configuration interaction wave functions as a quality measure. We critically review issues, such as the required size of the active space, size-consistency, symmetry breaking in the wave function, and the dependence of TCC on the reference wave function. We observe that possible errors caused by symmetry breaking can be mitigated by employing the determinant with the largest weight in the active space as reference for the TCC calculation. We find the TCC model to be promising in calculations with active orbital spaces which include all orbitals with a large single-orbital entropy, even if the active spaces become very large and then may require modern active-space approaches that are not restricted to comparatively small numbers of orbitals. Furthermore, utilizing large active spaces can improve on the TCC wave function approximation and reduce the size-consistency error because the presence of highly excited determinants affects the accuracy of the coefficients of low-excited determinants in the active space.

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