Genome-wide transcriptome analysis of toxigenic Fusarium verticillioides in response to variation of temperature and water activity on maize kernels.

Fusarium verticillioides is one of the important mycotoxigenic pathogens of maize since it causes severe yield losses and produces fumonisins (FBs) to threaten human and animal health. Previous studies showed that temperature and water activity (aw) are two pivotal environmental factors affecting F. verticillioides growth and FBs production during maize storage. However, the genome-wide transcriptome analysis of differentially expressed genes (DEGs) in F. verticillioides under the stress combinations of temperature and aw has not been studied in detail. In this study, DEGs of F. verticillioides and their related regulatory pathways were analyzed in response to the stress of temperature and aw combinations using RNA-Seq. The results showed that the optimal growth conditions for F. verticillioides were 0.98 aw and 25 °C, whereas the highest per-unit yield of the fumonisin B1 (FB1) was observed at 0.98 aw and 15 °C. The RNA-seq analysis showed that 9648 DEGs were affected by temperature regardless of aw levels, whereas only 218 DEGs were affected by aw regardless of temperature variations. Gene Ontology (GO) analysis revealed that a decrease in temperature at both aw levels led to a significant upregulation of genes associated with 24 biological processes, while three biological processes were downregulated. Furthermore, when aw was decreased at both temperatures, seven biological processes were significantly upregulated and four were downregulated. The Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analysis revealed that the genes, whose expression was upregulated when the temperature decreased, were predominantly associated with the proteasome pathway, whereas the genes, whose expression was downregulated when the aw decreased, were mainly linked to amino acid metabolism. For the FB1, except for the FUM15 gene, the other 15 biosynthetic-related genes were highly expressed at 0.98 aw and 15 °C. In addition, the expression pattern analysis of other biosynthetic genes involved in secondary metabolite production and regulation of fumonisins production was conducted to explore how this fungus responds to the stress combinations of temperature and aw. Overall, this study primarily examines the impact of temperature and aw on the growth of F. verticillioides and its production of FB1 using transcriptome data. The findings presented here have the potential to contribute to the development of novel strategies for managing fungal diseases and offer valuable insights for preventing fumonisin contamination in food and feed storage.

The F-box protein SHORT PRIMARY ROOT modulates primary root meristem activity by targeting SEUSS-LIKE protein for degradation in rice.

Root meristem activity is essential for root morphogenesis and adaptation, but the molecular mechanism regulating root meristem activity is not fully understood. Here, we identify an F-box family E3 ubiquitin ligase named SHORT PRIMARY ROOT (SHPR) that regulates primary root (PR) meristem activity and cell proliferation in rice. SHPR loss-of-function mutations impair PR elongation in rice. SHPR is involved in the formation of an SCF complex with the Oryza sativa SKP1-like protein OSK1/20. We show that SHPR interacts with Oryza sativa SEUSS-LIKE (OsSLK) in the nucleus and is required for OsSLK polyubiquitination and degradation by the ubiquitin 26S-proteasome system (UPS). Transgenic plants overexpressing OsSLK display a shorter PR phenotype, which is similar to the SHPR loss-of-function mutants. Genetic analysis suggests that SHPR promotes PR elongation in an OsSLK-dependent manner. Collectively, our study establishes SHPR as an E3 ubiquitin ligase that targets OsSLK for degradation, and uncovers a protein ubiquitination pathway as a mechanism for modulating root meristem activity in rice.

Evaluating anti-viral effect of Tylvalosin tartrate on porcine reproductive and respiratory syndrome virus and analyzing the related gene regulation by transcriptomics.

BACKGROUND: Porcine reproductive and respiratory syndrome virus (PRRSV) is an economically important pathogen, characterized by its genetic and antigenic variation. The PRRSV vaccine is widely used, however, the unsatisfied heterologic protection and the risk of reverse virulence raise the requirement to find some new anti-PRRSV strategies for disease control. Tylvalosin tartrate is used to inhibit PRRSV in the field non-specifically, however, the mechanism is still less known. METHODS: The antiviral effects of Tylvalosin tartrates from three producers were evaluated in a cell inoculation model. Their safety and efficacy concentrations, and effecting stage during PRRSV infection were analyzed. And, the Tylvalosin tartrates regulated genes and pathways which are potentially related to the anti-viral effect were further explored by using transcriptomics analysis. Last, the transcription level of six anti-virus-related DEGs was selected to confirm by qPCR, and the expression level of HMOX1, a reported anti-PRRSV gene, was proved by western blot. RESULTS: The safety concentrations of Tylvalosin tartrates from three different producers were 40 µg/mL (Tyl A, Tyl B, and Tyl C) in MARC-145 cells and 20 µg/mL (Tyl A) or 40 µg/mL (Tyl B and Tyl C) in primary pulmonary alveolar macrophages (PAMs) respectively. Tylvalosin tartrate can inhibit PRRSV proliferation in a dose-dependent manner, causing more than 90% proliferation reduction at 40 µg/mL. But it shows no virucidal effect, and only achieves the antiviral effect via long-term action on the cells during the PRRSV proliferation. Furthermore, GO terms and KEGG pathway analysis was carried out based on the RNA sequencing and transcriptomic data. It was found that the Tylvalosin tartrates can regulate the signal transduction, proteolysis, and oxidation-reduction process, as well as some pathways such as protein digestion and absorption, PI3K-Akt signaling, FoxO signaling, and Ferroptosis pathways, which might relate to PRRSV proliferation or host innate immune response, but further studies still need to confirm it. Among them, six antivirus-related genes HMOX1, ATF3, FTH1, FTL, NR4A1, and CDKN1A were identified to be regulated by Tylvalosin tartrate, and the increased expression level of HMOX1 was further confirmed by western blot. CONCLUSIONS: Tylvalosin tartrate can inhibit PRRSV proliferation in vitro in a dose-dependent manner. The identified DEGs and pathways in transcriptomic data will provide valuable clues for further exploring the host cell restriction factors or anti-PRRSV target.

One-step fabrication of Cu-based metal organic framework multilayer core-shell microspheres for efficiently catalyzing the oxygen reduction reaction.

Micro/nanomaterials with multilayer core-shell structures are receiving widespread attention due to their potential in energy storage and conversion systems. However, simple fabrication of multilayered core-shell structured micro/nanomaterials with a consistent composition still faces a great challenge. Herein, a simple one-step solvothermal method is used to fabricate Cu-based metal organic framework multilayer core-shell microspheres (Cu-MOF-MCSMSs) as efficient oxygen reduction reaction (ORR) catalysts. The systematic structural evolution of Cu-MOF-MCSMSs is from microspheres to core-shell microspheres and then to multilayer core-shell microspheres. Additionally, different transition metal cations and anions can also influence the structures, compositions and thus ORR activities of the synthesized MOFs. The representative Cu-MOF-MCSMSs exhibit high ORR activity and cycling stability. The simple method can provide a good guide to fabricate other micro/nanomaterials with multilayer core-shell structures and desirable properties.

Facile construction of S-containing Co-based metal organic framework core-shell microspheres as an efficient bifunctional oxygen electrocatalyst.

A cost-effective non-noble metal bifunctional electrocatalyst towards the oxygen reduction reaction (ORR) and the oxygen evolution reaction (OER) is very important for energy-related applications. Micro/nanomaterials with core-shell structures have emerged as potential non-noble metal catalyst candidates. Herein, an efficient bifunctional oxygen electrocatalyst, S-containing Co-based metal organic framework core-shell microspheres (Co-MOF-CSMSs), has been designed and constructed by using 2,2':5',2''-terthiophene-5,5''-dicarboxylic acid as a novel ligand through a facile one-step hydrothermal method. Due to the integrated favorable structural characteristics of the core-shell structure and MOFs for electrocatalysis, Co-MOF-CSMSs are revealed as a good bifunctional electrocatalyst for the ORR and OER, including an onset potential of 0.93 V vs. RHE (reversible hydrogen electrode), a half-wave potential of 0.78 V vs. RHE and an overpotential of 0.35 V at 10 mA cm-2. This work provides a low-cost and facile method to design and construct advanced micro/nanomaterials with core-shell structures to targetedly develop high-performance bifunctional oxygen electrocatalysts.

Development and performance assessment of electrically heated gloves with smart temperature control function.

A pair of lightweight electrically heated gloves (EHG) with smart temperature control function was developed. To evaluate the thermoregulation properties of the EHG, human trials were conducted in a climate chamber (2.5 °C, 60% RH). The changes in skin temperature at all fingers and the opisthenar, and the subjective thermal sensation were recorded over 60 min. The effects of two air velocities (i.e., 0.17 and 0.50 m/s) on the cold protective performance of the EHG in scenarios of heating and control were also investigated. For heating scenarios, skin temperature and thermal sensation at all fingers and the opisthenar were found significantly higher than those in control conditions. Moreover, the air velocity at 0.50 m/s greatly reduced the cold protective performance of the gloves. The research findings can be applied to improve thermal comfort and extend working times for persons in cold environments.

On the Improvement of Thermal Protection for Temperature-Responsive Protective Clothing Incorporated with Shape Memory Alloy.

This study explored the application of shape memory alloy (SMA) springs in a multilayer protective fabric assembly for intelligent insulation that responded to thermal environment changes. Once the SMA spring was actuated, clothing layers were separated, creating an adjustable air gap between the adjacent fabric layers. The impacts of six different SMA arrangement modes and two different spring sizes on thermal protection against either a radiant heat exposure (12 kW/m²) or a hot surface exposure (400 °C) were investigated. The findings showed that the incorporation of SMA springs into the fabric assembly improved the thermal protection, but the extent to which the springs provided thermal protection was dependent on the arrangement mode and spring size. The effectiveness of reinforcing the protective performance using SMA springs depended on the ability of clothing layers to expand an air layer. The regression models were established to quantitatively assess the relationship between the air gap formed by SMA spring and the thermal protective performance of clothing. This study demonstrated the potential of SMA spring as a suitable material for the development of intelligent garments to provide additional thermal protection and thus reduce the number of clothing layers for transitional thermal protective clothing.