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1.
Proc Natl Acad Sci U S A ; 121(15): e2321668121, 2024 Apr 09.
Artigo em Inglês | MEDLINE | ID: mdl-38557180

RESUMO

The ultimate regularity of quantum mechanics creates a tension with the assumption of classical chaos used in many of our pictures of chemical reaction dynamics. Out-of-time-order correlators (OTOCs) provide a quantum analog to the Lyapunov exponents that characterize classical chaotic motion. Maldacena, Shenker, and Stanford have suggested a fundamental quantum bound for the rate of information scrambling, which resembles a limit suggested by Herzfeld for chemical reaction rates. Here, we use OTOCs to study model reactions based on a double-well reaction coordinate coupled to anharmonic oscillators or to a continuum oscillator bath. Upon cooling, as one enters the tunneling regime where the reaction rate does not strongly depend on temperature, the quantum Lyapunov exponent can approach the scrambling bound and the effective reaction rate obtained from a population correlation function can approach the Herzfeld limit on reaction rates: Tunneling increases scrambling by expanding the state space available to the system. The coupling of a dissipative continuum bath to the reaction coordinate reduces the scrambling rate obtained from the early-time OTOC, thus making the scrambling bound harder to reach, in the same way that friction is known to lower the temperature at which thermally activated barrier crossing goes over to the low-temperature activationless tunneling regime. Thus, chemical reactions entering the tunneling regime can be information scramblers as powerful as the black holes to which the quantum Lyapunov exponent bound has usually been applied.

2.
J Phys Chem Lett ; 15(17): 4616-4622, 2024 May 02.
Artigo em Inglês | MEDLINE | ID: mdl-38640483

RESUMO

The influence functional (IF) encodes all of the information required for calculating the dynamical properties of a system in contact with its environment. A direct and simple procedure is introduced for extracting from a few numerical evaluations of the IF, without computing time correlation functions or evaluating integrals, the parameters required for path integral calculations, either within or beyond the harmonic mapping, and for assessing the accuracy of the harmonic bath approximation. In addition, the small matrix decomposition of the path integral (SMatPI) is extended to anharmonic environments and the required matrices are constructed directly from the IF.

3.
J Phys Chem B ; 128(10): 2469-2480, 2024 Mar 14.
Artigo em Inglês | MEDLINE | ID: mdl-38437738

RESUMO

The small matrix decomposition of the real-time path integral (SMatPI) allows for numerically exact and efficient propagation of the reduced density matrix (RDM) for system-bath Hamiltonians. Its high efficiency lies in the small size of the SMatPI matrices employed in the iterative algorithm, whose size is equal to that of the full RDM. By avoiding the storage and multiplication of large tensors, the SMatPI algorithm is applicable in multistate systems under a variety of conditions. The main computational effort is the evaluation of path sums within the entangled memory length to construct the SMatPI matrices. A number of methods are available for this task, each with its own favorable parameter regime, but calculations with strong system-bath coupling and long memory at low temperatures remain out of reach. The present paper evaluates the path sums by binning the paths (in forward time only) based on their amplitudes, which depend on the number and type of kinks they contain. The algorithm is very efficient, leading to a dramatic acceleration of path sums and significantly extending the accessible memory length in the most challenging regimes.

4.
J Phys Chem Lett ; 15(5): 1462-1468, 2024 Feb 08.
Artigo em Inglês | MEDLINE | ID: mdl-38294874

RESUMO

An efficient, fully quantum mechanical, real-time path integral method for including the effects of static disorder in the dynamics of systems coupled to common or local harmonic baths is presented. Rather than performing a large number of demanding calculations for different realizations of the system Hamiltonian, the influence of the bath is captured through a single evaluation of the path sum by grouping the system paths into equivalence classes of fixed system amplitudes. The method is illustrated with several analytical and numerical examples that show a variety of nontrivial effects arising from the interplay among coherence, dissipation, thermal fluctuations, and geometric phases.

5.
J Chem Phys ; 158(22)2023 Jun 14.
Artigo em Inglês | MEDLINE | ID: mdl-37293962

RESUMO

This paper reports the release of PathSum, a new software suite of state-of-the-art path integral methods for studying the dynamics of single or extended systems coupled to harmonic environments. The package includes two modules, suitable for system-bath problems and extended systems comprising many coupled system-bath units, and is offered in C++ and Fortran implementations. The system-bath module offers the recently developed small matrix path integral (SMatPI) and the well-established iterative quasi-adiabatic propagator path integral (i-QuAPI) method for iteration of the reduced density matrix of the system. In the SMatPI module, the dynamics within the entanglement interval can be computed using QuAPI, the blip sum, time evolving matrix product operators, or the quantum-classical path integral method. These methods have distinct convergence characteristics and their combination allows a user to access a variety of regimes. The extended system module provides the user with two algorithms of the modular path integral method, applicable to quantum spin chains or excitonic molecular aggregates. An overview of the methods and code structure is provided, along with guidance on method selection and representative examples.


Assuntos
Algoritmos , Teoria Quântica , Software
6.
J Chem Phys ; 158(14): 144107, 2023 Apr 14.
Artigo em Inglês | MEDLINE | ID: mdl-37061502

RESUMO

Some topological features of multisite Hamiltonians consisting of harmonic potential surfaces with constant site-to-site couplings are discussed. Even in the absence of Duschinsky rotation, such a Hamiltonian assumes the system-bath form only if severe constraints exist. The simplest case of a common bath that couples to all sites is realized when the potential minima are collinear. The bath reorganization energy increases quadratically with site distance in this case. Another frequently encountered situation involves exciton-vibration coupling in molecular aggregates, where the intramolecular normal modes of the monomers give rise to local harmonic potentials. In this case, the reorganization energy accompanying excitation transfer is independent of site-to-site separation, thus this situation cannot be described by the usual system-bath Hamiltonian. A vector system-bath representation is introduced, which brings the exciton-vibration Hamiltonian in system-bath form. In this, the system vectors specify the locations of the potential minima, which in the case of identical monomers lie on the vertices of a regular polyhedron. By properly choosing the system vectors, it is possible to couple each bath to one or more sites and to specify the desired initial density. With a collinear choice of system vectors, the coupling reverts to the simple form of a common bath. The compact form of the vector system-bath coupling generalizes the dissipative tight-binding model to account for local, correlated, and common baths. The influence functional for the vector system-bath Hamiltonian is obtained in a compact and simple form.

7.
J Phys Chem Lett ; 14(16): 3835-3843, 2023 Apr 27.
Artigo em Inglês | MEDLINE | ID: mdl-37067041

RESUMO

We present and analyze coherence maps [ J. Phys. Chem. B 2022, 126, 9361-9375] to investigate the quantum coherences that are created, sustained, and damped by vibrational modes during the transfer of excitation energy from the B800 (outer) to the B850 (inner) ring of the light harvesting complex 2 (LH2) of purple bacteria with a variety of initial conditions. The reduced density matrix of the 24-pigment complex, where the ground and excited electronic states of each bacteriochlorophyll are explicitly coupled to 50 intramolecular vibrations at room temperature, is obtained from fully quantum-mechanical small matrix path integral (SMatPI) calculations. The coherence maps show a very rapid localization within the outer ring, accompanied by the formation of inter-ring quantum superpositions that evolve to a partial quantum delocalization at equilibrium, and quantify in state-to-state detail the flow of energy within the complex.


Assuntos
Proteínas de Bactérias , Complexos de Proteínas Captadores de Luz , Complexos de Proteínas Captadores de Luz/metabolismo , Transferência de Energia , Bactérias/metabolismo , Bacterioclorofilas
8.
J Phys Chem B ; 126(45): 9361-9375, 2022 11 17.
Artigo em Inglês | MEDLINE | ID: mdl-36327150

RESUMO

We discuss the general features of the time-evolving reduced density matrix (RDM) of multistate systems coupled to dissipative environments and show that many important aspects of the dynamics are visualized effectively and transparently through coherence maps, defined as snapshots of the real and imaginary components of the RDM on the square grid of system sites. In particular, the spread, signs, and shapes of the coherence maps collectively characterize the state of the system and the nature of the dynamics, as well as the equilibrium state. The topology of the system is readily reflected in its coherence map. Rows and columns show the composition of quantum superpositions, and their filling indicates the extent of the surviving coherence. Linear combinations of imaginary RDM elements specify instantaneous population derivatives. The main diagonal comprises the incoherent component of the dynamics, while the upper/lower triangular areas give rise to coherent contributions that increase the purity of the RDM. In open systems, the coherence map evolves to a band surrounding the principal diagonal whose width decreases with increasing temperature and dissipation strength. We illustrate these behaviors with examples of 10-site model molecular aggregates with Frenkel exciton couplings, where the electronic states of each monomer are coupled to harmonic vibrational baths.


Assuntos
Teoria Quântica , Vibração , Temperatura
9.
Sci Adv ; 8(43): eadd0023, 2022 Oct 28.
Artigo em Inglês | MEDLINE | ID: mdl-36288310

RESUMO

The efficient, directional transfer of absorbed solar energy between photosynthetic light-harvesting complexes continues to pose intriguing questions. In this work, we identify the pathways of energy flow between the B800 and B850 rings in the LH2 complex of Rhodopseudomonas molischianum using fully quantum mechanical path integral methods to simulate the excited-state dynamics of the 24 bacteriochlorophyll molecules and their coupling to 50 normal mode vibrations in each chromophore. While all pigments are identical, the tighter packing of the inner B850 ring is responsible for the thermodynamic stabilization of the inner ring. Molecular vibrations enable the 1-ps flow of energy to the B850 states, which would otherwise be kinetically inaccessible. A classical treatment of the vibrations leads to uniform equilibrium distribution of the excitation, with only 67% transferred to the inner ring. However, spontaneous fluctuations associated with the quantum motion of the nuclei increase the transfer efficiency to 90%.

10.
J Phys Chem Lett ; 13(34): 8141-8149, 2022 Sep 01.
Artigo em Inglês | MEDLINE | ID: mdl-36000919

RESUMO

For a multistate system coupled to a general environment through terms local in the system basis, we show that the time derivatives of populations are given in terms of imaginary components of coherences, i.e., off-diagonal elements of the reduced density matrix. When the process exhibits rate dynamics, we show that all state-to-state rates can be obtained from the early "plateau" values of these imaginary components. The evolution of the state populations is then obtained from the short-time simulation results and the solution of the kinetic equations with the computed rate matrix. These expressions generalize the reactive flux method and its nonequilibrium version to multistate processes and show that even in the completely incoherent limit of rate kinetics, the time evolution of populations is governed by coherences. Further, we show that by virtue of detailed balance, the short-time values of the imaginary components of coherences fully determine the equilibrium populations.


Assuntos
Teoria Quântica , Simulação por Computador , Cinética
11.
J Phys Chem Lett ; 13(32): 7413-7419, 2022 Aug 18.
Artigo em Inglês | MEDLINE | ID: mdl-35929598

RESUMO

The commonly used Franck-Condon (FC) approximation is inadequate for explaining the electronic spectra of compounds that possess vibrations with substantial Herzberg-Teller (HT) couplings. Metal-based tetrapyrrole derivatives, which are ubiquitous natural pigments, often exhibit prominent HT activity. In this paper, we compare the condensed phase spectra of zinc-tetraphenylporphyrin (ZnTPP) and zinc-phthalocyanine (ZnPc), which exhibit vastly different spectral features in spite of sharing a common tetrapyrrole backbone. The absorption and emission spectra of ZnTPP are characterized by a lack of mirror symmetry and nontrivial temperature dependence. In contrast, mirror symmetry is restored, and the nontrivial temperature-dependent features disappear in ZnPc. We attribute these differences to FC-HT interference, which is less pronounced in ZnPc because of a larger FC component in the dipole moment that leads to FC-dominated transitions. A single minimalistic FC-HT vibronic model reproduces all the experimental spectral features of these molecules. These observations suggest that FC-HT interference is highly susceptible to chemical modification.


Assuntos
Tetrapirróis , Vibração , Fenômenos Químicos , Temperatura , Zinco
12.
J Chem Phys ; 157(1): 015101, 2022 Jul 07.
Artigo em Inglês | MEDLINE | ID: mdl-35803821

RESUMO

We report fully quantum mechanical simulations of excitation energy transfer within the peripheral light harvesting complex (LH2) of Rhodopseudomonas molischianum at room temperature. The exciton-vibration Hamiltonian comprises the 16 singly excited bacteriochlorophyll states of the B850 (inner) ring and the 8 states of the B800 (outer) ring with all available electronic couplings. The electronic states of each chromophore couple to 50 intramolecular vibrational modes with spectroscopically determined Huang-Rhys factors and to a weakly dissipative bath that models the biomolecular environment. Simulations of the excitation energy transfer following photoexcitation of various electronic eigenstates are performed using the numerically exact small matrix decomposition of the quasiadiabatic propagator path integral. We find that the energy relaxation process in the 24-state system is highly nontrivial. When the photoexcited state comprises primarily B800 pigments, a rapid intra-band redistribution of the energy sharply transitions to a significantly slower relaxation component that transfers 90% of the excitation energy to the B850 ring. The mixed character B850* state lacks the slow component and equilibrates very rapidly, providing an alternative energy transfer channel. This (and also another partially mixed) state has an anomalously large equilibrium population, suggesting a shift to lower energy by virtue of exciton-vibration coupling. The spread of the vibrationally dressed states is smaller than that of the eigenstates of the bare electronic Hamiltonian. The total population of the B800 band is found to decay exponentially with a 1/e time of 0.5 ps, which is in good agreement with experimental results.


Assuntos
Complexos de Proteínas Captadores de Luz , Rodopseudomonas , Proteínas de Bactérias , Bacterioclorofilas , Transferência de Energia , Complexos de Proteínas Captadores de Luz/metabolismo , Rodopseudomonas/metabolismo
13.
J Phys Chem Lett ; 13(15): 3492-3498, 2022 Apr 21.
Artigo em Inglês | MEDLINE | ID: mdl-35416671

RESUMO

The quantum-classical path integral (QCPI) is a rigorous formulation of nonadiabatic dynamics, where the dynamical interaction between a quantum system and its environment is captured consistently through classical trajectories driven by forces along quantum paths of the system. In this Letter, we develop a small matrix decomposition (SMatQCPI) that eliminates the tensor storage requirements of the iterative QCPI algorithm. In the case of a system coupled to a harmonic bath, SMatQCPI provides fully quantum mechanical propagation, which also reduces the computational cost to that of a single QCPI step. Further, the SMatQCPI matrices only need to account for quantum contributions to decoherence, allowing high efficiency in challenging regimes of incoherent dynamics. Overall, this new composite algorithm combines the best features of two powerful path integral formulations and offers a versatile tool for simulating condensed phase quantum dynamics.

14.
J Phys Chem B ; 126(15): 2899-2911, 2022 04 21.
Artigo em Inglês | MEDLINE | ID: mdl-35389662

RESUMO

Some molecules of chemical and biological significance possess vibrations with significant Herzberg-Teller (HT) couplings, which render the Franck-Condon (FC) approximation inadequate and cause the breakdown of the well-known mirror-image symmetry between linear absorption and emission spectra. Using a model two-state system with displaced harmonic potential surfaces, we show analytically that the FC-HT interference gives rise to asymmetric intensity modification, which has the same sign for all transitions on one side of the 0-0 absorption line and the opposite sign in the equivalent fluorescence transitions, while the trend is exactly reversed for all transitions on the other side the 0-0 line. We examine the dependence of the absorption-emission asymmetry on the mode frequency, Huang-Rhys factor, and dipole moment parameters to show the recovery of symmetry with particular combinations of parameters and a crossover from fluorescence to absorption dominance. We illustrate the analytical predictions through numerically exact calculations in models of one and two discrete vibrational modes and in the presence of a harmonic dissipative bath. In addition to homogeneous broadening effects, we identify large asymmetric shifts of absorption and emission band maxima, which can produce the illusion of unequal frequencies in the ground and excited potential surfaces as well as a nontrivial modulation of spectral asymmetry by temperature, which results from the enhancement of transitions on one side of the 0-0 line. These findings will aid the interpretation of experimental spectra in HT-active molecular systems.


Assuntos
Vibração
15.
J Am Chem Soc ; 144(14): 6298-6310, 2022 04 13.
Artigo em Inglês | MEDLINE | ID: mdl-35353523

RESUMO

Understanding how the complex interplay among excitonic interactions, vibronic couplings, and reorganization energy determines coherence-enabled transport mechanisms is a grand challenge with both foundational implications and potential payoffs for energy science. We use a combined experimental and theoretical approach to show how a modest change in structure may be used to modify the exciton delocalization, tune electronic and vibrational coherences, and alter the mechanism of exciton transfer in covalently linked cofacial Zn-porphyrin dimers (meso-beta linked ABm-ß and meso-meso linked AAm-m). While both ABm-ß and AAm-m feature zinc porphyrins linked by a 1,2-phenylene bridge, differences in the interporphyrin connectivity set the lateral shift between macrocycles, reducing electronic coupling in ABm-ß and resulting in a localized exciton. Pump-probe experiments show that the exciton dynamics is faster by almost an order of magnitude in the strongly coupled AAm-m dimer, and two-dimensional electronic spectroscopy (2DES) identifies a vibronic coherence that is absent in ABm-ß. Theoretical studies indicate how the interchromophore interactions in these structures, and their system-bath couplings, influence excitonic delocalization and vibronic coherence-enabled rapid exciton transport dynamics. Real-time path integral calculations reproduce the exciton transfer kinetics observed experimentally and find that the linking-modulated exciton delocalization strongly enhances the contribution of vibronic coherences to the exciton transfer mechanism, and that this coherence accelerates the exciton transfer dynamics. These benchmark molecular design, 2DES, and theoretical studies provide a foundation for directed explorations of nonclassical effects on exciton dynamics in multiporphyrin assemblies.


Assuntos
Porfirinas , Eletrônica , Modelos Teóricos , Porfirinas/química , Análise Espectral , Vibração
16.
Annu Rev Phys Chem ; 73: 349-375, 2022 04 20.
Artigo em Inglês | MEDLINE | ID: mdl-35081322

RESUMO

Excitation energy transfer (EET) is fundamental to many processes in chemical and biological systems and carries significant implications for the design of materials suitable for efficient solar energy harvest and transport. This review discusses the role of intramolecular vibrations on the dynamics of EET in nonbonded molecular aggregates of bacteriochlorophyll, a perylene bisimide, and a model system, based on insights obtained from fully quantum mechanical real-time path integral results for a Frenkel exciton Hamiltonian that includes all vibrational modes of each molecular unit at finite temperature. Generic trends, as well as features specific to the vibrational characteristics of the molecules, are identified. Weak exciton-vibration (EV) interaction leads to compact, near-Gaussian densities on each electronic state, whose peak follows primarily a classical trajectory on a torus, while noncompact densities and nonlinear peak evolution are observed with strong EV coupling. Interaction with many intramolecular modes and increasing aggregate size smear, shift, and damp these dynamical features.


Assuntos
Bacterioclorofilas , Vibração , Transferência de Energia
17.
J Chem Phys ; 155(23): 234705, 2021 Dec 21.
Artigo em Inglês | MEDLINE | ID: mdl-34937374

RESUMO

The modular path integral methodology is used to extend the well-known spin-boson dynamics to finite-length quantum Ising chains, where each spin is coupled to a dissipative harmonic bath. The chain is initially prepared in the ferromagnetic phase where all spins are aligned, and the magnetization is calculated with spin-spin coupling parameters corresponding to the paramagnetic phase, mimicking a quantum quench experiment. The observed dynamics is found to depend significantly on the location of the tagged spin. In the absence of a dissipative bath, the time evolution displays irregular patterns that arise from multiple frequencies associated with the eigenvalues of the chain Hamiltonian. Coupling of each spin to a harmonic bath leads to smoother dynamics, with damping effects that are stronger compared to those observed in the spin-boson model and more prominent in interior spins, a consequence of additional damping from the spin environment. Interior spins exhibit a transition from underdamped oscillatory to overdamped monotonic dynamics as the temperature, spin-bath, or spin-spin coupling is increased. In addition to these behaviors, a new dynamical pattern emerges in the evolution of edge spins with strong spin-spin coupling at low and intermediate temperatures, where the magnetization oscillates either above or below the equilibrium value.

18.
J Phys Chem A ; 125(48): 10500-10506, 2021 Dec 09.
Artigo em Inglês | MEDLINE | ID: mdl-34812645

RESUMO

The small matrix decomposition of the quasi-adiabatic propagator path integral (SMatPI) for a system coupled to a harmonic bath, which accounts for multitime memory correlations in the influence functional without the use of tensors, is extended to include a time-dependent term that drives the system. In the case of a periodic field, the algorithm requires the construction of SMatPI matrices initialized over a short time interval. The SMatPI algorithm circumvents the large array storage of tensor-based iterative path integral decompositions and, in the case of a periodic field, also eliminates the demanding tensor multiplication at each time step, leading to dramatic savings which allow the fully quantum mechanical treatment of multistate systems and long-memory environments.

19.
J Phys Chem B ; 125(29): 8137-8151, 2021 07 29.
Artigo em Inglês | MEDLINE | ID: mdl-34282911

RESUMO

The dynamical behaviors of a two-level system (TLS) coupled to a harmonic dissipative bath has been studied extensively using a variety of analytical and numerical methods. The focus of the vast majority of these studies has been on the properties of the TLS, averaged with respect to the bath degrees of freedom. In this work, we use real-time path integral methods to probe the behavior of select bath degrees of freedom during the dynamics of a symmetric two-level system (TLS) coupled to a dissipative bath by calculating system-bath densities (SBD) and coordinate expectation values. Overall, the SBD motion on each diabatic state is simpler than the motion of the total density. In the weak coupling regime, which characterizes the parameters of oscillators that comprise such a bath, the SBD on each TLS state remains primarily compact and Gaussian-like, such that its peak is well characterized by the mode expectation value. In the absence of a dissipative environment, nonadiabatic density depletion leads to spikes in coordinate expectation values. The evolution of the SBD peak trajectory for two discrete modes exhibits Lissajous patterns with frequency-dependent shapes that strongly resemble classical trajectory motion on a torus. These patterns become more complex when the coupling of the mode to the TLS is increased outside of this regime, leading to persistent small amplitude oscillations in the TLS populations characterized by a very slow decay and SBD trajectories that exhibit behaviors reminiscent of chaotic classical systems. Indirect coupling to a dissipative bath has a stabilizing effect on the dynamics, eliminating spikes, synchronizing the SBD motion on the two diabatic states and regularizing the SBD trajectory to simple rectangular Lissajous-like shapes with a slowly shrinking boundary, regardless of the mode frequencies.


Assuntos
Movimento (Física)
20.
Phys Chem Chem Phys ; 23(29): 15503-15514, 2021 Jul 28.
Artigo em Inglês | MEDLINE | ID: mdl-34286768

RESUMO

The process of excitation energy transfer (EET) in molecular aggregates is etched with the signatures of a multitude of electronic and vibrational time scales that often are extremely difficult to resolve. The effect of the motion associated with one molecular vibration on that of another is fundamental to the dynamics of EET. In this paper we present simple theoretical ideas along with fully quantum mechanical calculations to develop a comprehensive mechanistic picture of EET in terms of the time evolution of electronic-vibrational densities (EVD) in a perylene bisimide (PBI) dimer, where 28 intramolecular normal modes couple to the ground and excited electronic states of each molecule. The EVD motion exhibits a plethora of dynamical features, which impart physical justification for the composite effects observed in the EET dynamics. Weakly coupled vibrations lead to classical-like motion of the EVD center on each electronic state, while highly nontrivial EVD characteristics develop under moderate or strong exciton-vibration interaction, leading to the formation of split or crescent-shaped densities, as well as density retention that slows down energy transfer and creates new peaks in the electronic populations. Pronounced correlation effects are observed in two-mode projections of the EVD, as a consequence of indirect vibrational coupling between uncoupled normal modes induced by the electronic coupling. Such indirect coupling depends on the strength of exciton-vibration interactions as well as the frequency mismatch between the two modes and leaves nontrivial signatures in the electronic population dynamics. The collective effects of many vibrational modes cause a partial smearing of these features through dephasing.

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