Evolutionary gravitational neocognitron neural network optimized with marine predators optimization algorithm for MRI brain tumor classification.

Magnetic resonance imaging (MRI) is a powerful tool for tumor diagnosis in human brain. Here, the MRI images are considered to detect the brain tumor and classify the regions as meningioma, glioma, pituitary and normal types. Numerous existing methods regarding brain tumor detection were suggested previously, but none of the methods accurately categorizes the brain tumor and consumes more computation period. To address these problems, an Evolutionary Gravitational Neocognitron Neural Network optimized with Marine Predators Algorithm is proposed in this article for MRI Brain Tumor Classification (EGNNN-VGG16-MPA-MRI-BTC). Initially, the brain MRI pictures are collected under Brats MRI image dataset. By using Savitzky-Golay Denoising approach, these images are pre-processed. The features are extracted utilizing visual geometry group network (VGG16). By utilizing VGG16, the features, like Grey level features, Haralick Texture features are extracted. These extracted features are given to EGNNN classifier, which categorizes the brain tumor as glioma, meningioma, pituitary gland and normal. Batch Normalization (BN) layer of EGNNN is eliminated and included with VGG16 layer. Marine Predators Optimization Algorithm (MPA) optimizes the weight parameters of EGNNN. The simulation is activated in MATLAB. Finally, the EGNNN-VGG16-MPA-MRI-BTC method attains 38.98%, 46.74%, 23.27% higher accuracy, 24.24%, 37.82%, 13.92% higher precision, 26.94%, 47.04%, 38.94% higher sensitivity compared with the existing AlexNet-SVM-MRI-BTC, RESNET-SGD-MRI-BTC and MobileNet-V2-MRI-BTC models respectively.

Evolutionary Gravitational Neocognitron Neural Network optimized with Marine Predators Algorithm is proposed in this article for MRI Brain Tumor Classification (EGNNN-VGG16-MPA-MRI-BTC). Initially, the brain MRI pictures are collected under Brats MRI image dataset. By using Savitzky-Golay Denoising approach, these images are pre-processed. The features are extracted utilizing visual geometry group network (VGG16). By utilizing VGG16, the features, like Grey level features, Haralick Texture features are extracted. These extracted features are given to EGNNN classifier, which categorizes the brain tumor as glioma, meningioma, pituitary gland and normal. Batch Normalization (BN) layer of EGNNN is eliminated and included with VGG16 layer. Marine Predators Optimization Algorithm (MPA) optimizes the weight parameters of EGNNN.

Annotation of nerve cord transcriptome in earthworm Eisenia fetida.

In annelid worms, the nerve cord serves as a crucial organ to control the sensory and behavioral physiology. The inadequate genome resource of earthworms has prioritized the comprehensive analysis of their transcriptome dataset to monitor the genes express in the nerve cord and predict their role in the neurotransmission and sensory perception of the species. The present study focuses on identifying the potential transcripts and predicting their functional features by annotating the transcriptome dataset of nerve cord tissues prepared by Gong et al., 2010 from the earthworm Eisenia fetida. Totally 9762 transcripts were successfully annotated against the NCBI nr database using the BLASTX algorithm and among them 7680 transcripts were assigned to a total of 44,354 GO terms. The conserve domain analysis indicated the over representation of P-loop NTPase domain and calcium binding EF-hand domain. The COG functional annotation classified 5860 transcript sequences into 25 functional categories. Further, 4502 contig sequences were found to map with 124 KEGG pathways. The annotated contig dataset exhibited 22 crucial neuropeptides having considerable matches to the marine annelid Platynereis dumerilii, suggesting their possible role in neurotransmission and neuromodulation. In addition, 108 human stem cell marker homologs were identified including the crucial epigenetic regulators, transcriptional repressors and cell cycle regulators, which may contribute to the neuronal and segmental regeneration. The complete functional annotation of this nerve cord transcriptome can be further utilized to interpret genetic and molecular mechanisms associated with neuronal development, nervous system regeneration and nerve cord function.

Studies on regeneration of central nervous system and social ability of the earthworm Eudrilus eugeniae.

Earthworms are segmented invertebrates that belong to the phylum Annelida. The segments can be divided into the anterior, clitellar and posterior parts. If the anterior part of the earthworm, which includes the brain, is amputated, the worm would essentially survive even in the absence of the brain. In these brain amputee-derived worms, the nerve cord serves as the primary control center for neurological function. In this current work, we studied changes in the expression levels of anti-acetylated tubulin and serotonin as the indicators of neuro-regenerative processes. The data reveal that the blastemal tissues express the acetylated tubulin and serotonin from day four and that the worm amputated at the 7th segment takes 30 days to complete the regeneration of brain. The ability of self-assemblage is one of the specific functions of the earthworm's brain. The brain amputee restored the ability of self-assemblage on the eighth day.

Integrated micro-biochemical approach for phytoremediation of cadmium and lead contaminated soils using Gladiolus grandiflorus L cut flower.

The potential of vermicompost, elemental sulphur, Thiobacillus thiooxidans and Pseudomonas putida for phytoremediation is well known individually but their integrated approach has not been discovered so far. The present work highlights the consideration of so far overlooked aspects of their integrated treatment by growing the ornamental plant, Gladiolus grandiflorus L in uncontaminated and sewage-contaminated soils (sulphur-deficient alluvial Entisols, pH 7.6-7.8) for phytoremediation of cadmium and lead under pot experiment. Between vermicompost and elemental sulphur, the response of vermicompost was higher towards improvement in the biometric parameters of plants, whereas the response of elemental sulphur was higher towards enhanced bioaccumulation of heavy metals under soils. The integrated treatment (T7: vermicompost 6g and elemental sulphur 0.5gkg(-1) soil and co-inoculation of the plant with T. thiooxidans and P. putida) was found superior in promoting root length, plant height and dry biomass of the plant. The treatment T7 caused enhanced accumulation of Cd up to 6.96 and 6.45mgkg(-1) and Pb up to 22.6 and 19.9mgkg(-1) in corm and shoot, respectively at the contaminated soil. T7 showed maximum remediation efficiency of 0.46% and 0.19% and bioaccumulation factor of 2.92 and 1.21 and uptake of 6.75 and 21.4mgkg(-1) dry biomass for Cd and Pb respectively in the contaminated soil. The integrated treatment T7 was found significant over the individual treatments to promote plant growth and enhance phytoremediation. Hence, authors conclude to integrate vermicompost, elemental sulphur and microbial co-inoculation for the enhanced clean-up of Cd and Pb-contaminated soils.

Integrated micro-biochemical approach for phytoremediation of cadmium and zinc contaminated soils.

The integrated potential of oilcake manure (OM), elemental sulphur (S(0)), Glomus fasciculatum and Pseudomonas putida by growing Helianthus annuus L for phytoremediation of cadmium and zinc contaminated soils was investigated under pot experiment. The integrated treatment (2.5 g kg(-1) OM, 0.8 g kg(-1) S(0) and co-inoculation with G. fasciculatum and P. putida promoted the dry biomass of the plant. The treatment was feasible for enhanced cadmium accumulation up to 6.56 and 5.25 mg kg(-1) and zinc accumulation up to 45.46 and 32.56 mg kg(-1) in root and shoot, respectively, which caused maximum remediation efficiency (0.73 percent and 0.25 percent) and bioaccumulation factor (2.39 and 0.83) for Cd and Zn, respectively showing feasible uptake (in mg kg(-1) dry biomass) of Cd (5.55) and Zn (35.51) at the contaminated site. Thus, authors conclude to integrate oilcake manure, S(0) and microbial co-inoculation for enhanced clean-up of cadmium and zinc-contaminated soils.

Hyperaccumulator oilcake manure as an alternative for chelate-induced phytoremediation of heavy metals contaminated alluvial soils.

The ability of hyperaccumulator oilcake manure as compared to chelates was investigated by growing Calendula officinalis L for phytoremediation of cadmium and lead contaminated alluvial soil. The combinatorial treatment T6 [2.5 g kg(-1) oilcake manure+5 mmol kg(-1) EDDS] caused maximum cadmium accumulation in root, shoot and flower up to 5.46, 4.74 and 1.37 mg kg(-1) and lead accumulation up to 16.11, 13.44 and 3.17 mg kg(-1), respectively at Naini dump site, Allahabad (S3). The treatment showed maximum remediation efficiency for Cd (RR=0.676%) and Pb (RR=0.202%) at Mumfordganj contaminated site (S2). However, the above parameters were also observed at par with the treatment T5 [2.5 g kg(-1) oilcake manure +2 g kg(-1) humic acid]. Applied EDDS altered chlorophyll-a, chlorophyll-b, and carotene contents of plants while application of oilcake manure enhanced their contents in plant by 3.73-8.65%, 5.81-17.65%, and 7.04-17.19%, respectively. The authors conclude that Calendula officinalis L has potential to be safely grown in moderately Cd and Pb-contaminated soils and application of hyperaccumulator oilcake manure boosts the photosynthetic pigments of the plant, leading to enhanced clean-up of the cadmium and lead-contaminated soils. Hence, the hyperaccumulator oilcake manure should be preferred over chelates for sustainable phytoremediation through soil-plant rhizospheric process.

Phytoremediation potential of Helianthus annuus L in sewage-irrigated Indo-Gangetic alluvial soils.

The study of phytoremediation potential of Helianthus annuus L was conducted in the sewage-irrigated Indo-Gangetic alluvial soils, India. Calcium @ 1.0% and Zn @ 40 ppm enhanced the yield of H. annuus L and minimized the toxicity of Cr in the investigated soils. The study indicated that H. annuus L is highly sensitive to Cr and Zn in terms of metallic pollution; and may be used as indicator plant. For Cr-phytoremediation, humic acid treatment @ 500 mL/acre induced the Cr-accumulation in roots (p < 0.007) and in shoots (p < 0.015), which was recorded 3.21 and 3.16 mg/kg in root and shoot of H. annuus L, respectively. We suggest that H. annuus L fulfils the necessary condition for efficiently increasing species bioaccumulation after soil treatment with humic acid in Cr-polluted sewage-irrigated soils through soil- plant rhizospheric processes.

Phytoaccumulation, interaction, toxicity and remediation of cadmium from Helianthus annuus L. (sunflower).

An investigation was conducted to study the interaction between Cd and Ca, Zn and organic matter for Cd-phytoremediation in sunflower on the alluvium soil of the Sheila Dhar Institute (SDI) experimental farm, Allahabad (India). Application of 40 ppm Zn produced 11.18% extra dry matter (DM) content and 5.8% extra seed yield over the control. We recommended 1.0% Ca, 40 ppm Zn and 20 tons/ha of compost to enhance dry matter yield and diminish the Cd accumulation in 15 ppm Cd- ethylenediaminetetraacetic (EDTA)-treated plots up to 1/12 folds in sunflower (<0.21 ppm), which indicated phytoremediation of Cd-contaminated soil through soil-plant-rhizospheric processes.