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1.
J Chem Phys ; 122(15): 154903, 2005 Apr 15.
Artigo em Inglês | MEDLINE | ID: mdl-15945663

RESUMO

Employing molecular dynamics simulations of a coarse-grained model, the equilibrium swelling behavior of a cross-linked polyelectrolyte gel has been investigated with a bead-spring defect-free network with diamond-like topology under good solvent conditions and close to the theta-point, the counterions were treated explicitly. To examine the validity range of simple scaling arguments we varied the amount of charges in the system, the length of the network chains, the strength of the electrostatic interactions for both solvent qualities over a wide range of parameters. We find that classical theories only apply in the limit of weak electrostatics and suggest corrections based on the microscopic interplay of the systems' components accessible in a simulation, which model successfully our measured data.

2.
Biophys J ; 87(1): 75-80, 2004 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-15240446

RESUMO

The transition from localized to systemic spreading of bacteria, viruses, and other agents is a fundamental problem that spans medicine, ecology, biology, and agriculture science. We have conducted experiments and simulations in a simple one-dimensional system to determine the spreading of bacterial populations that occurs for an inhomogeneous environment under the influence of external convection. Our system consists of a long channel with growth inhibited by uniform ultraviolet (UV) illumination except in a small "oasis", which is shielded from the UV light. To mimic blood flow or other flow past a localized infection, the oasis is moved with a constant velocity through the UV-illuminated "desert". The experiments are modeled with a convective reaction-diffusion equation. In both the experiment and model, localized or extinct populations are found to develop, depending on conditions, from an initially localized population. The model also yields states where the population grows everywhere. Further, the model reveals that the transitions between localized, extended, and extinct states are continuous and nonhysteretic. However, it does not capture the oscillations of the localized population that are observed in the experiment.


Assuntos
Simulação por Computador , Meio Ambiente , Escherichia coli/fisiologia , Modelos Teóricos , Iluminação , Dinâmica Populacional , Raios Ultravioleta
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