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1.
Biochem J ; 476(20): 3033-3052, 2019 10 30.
Artigo em Inglês | MEDLINE | ID: mdl-31657440

RESUMO

6-NADH and 6-NADPH are strong inhibitors of several dehydrogenases that may form spontaneously from NAD(P)H. They are known to be oxidized to NAD(P)+ by mammalian renalase, an FAD-linked enzyme mainly present in heart and kidney, and by related bacterial enzymes. We partially purified an enzyme oxidizing 6-NADPH from rat liver, and, surprisingly, identified it as pyridoxamine-phosphate oxidase (PNPO). This was confirmed by the finding that recombinant mouse PNPO oxidized 6-NADH and 6-NADPH with catalytic efficiencies comparable to those observed with pyridoxine- and pyridoxamine-5'-phosphate. PNPOs from Escherichia coli, Saccharomyces cerevisiae and Arabidopsis thaliana also displayed 6-NAD(P)H oxidase activity, indicating that this 'side-activity' is conserved. Remarkably, 'pyridoxamine-phosphate oxidase-related proteins' (PNPO-RP) from Nostoc punctiforme, A. thaliana and the yeast S. cerevisiae (Ygr017w) were not detectably active on pyridox(am)ine-5'-P, but oxidized 6-NADH, 6-NADPH and 2-NADH suggesting that this may be their main catalytic function. Their specificity profiles were therefore similar to that of renalase. Inactivation of renalase and of PNPO in mammalian cells and of Ygr017w in yeasts led to the accumulation of a reduced form of 6-NADH, tentatively identified as 4,5,6-NADH3, which can also be produced in vitro by reduction of 6-NADH by glyceraldehyde-3-phosphate dehydrogenase or glucose-6-phosphate dehydrogenase. As 4,5,6-NADH3 is not a substrate for renalase, PNPO or PNPO-RP, its accumulation presumably reflects the block in the oxidation of 6-NADH. These findings indicate that two different classes of enzymes using either FAD (renalase) or FMN (PNPOs and PNPO-RPs) as a cofactor play an as yet unsuspected role in removing damaged forms of NAD(P).


Assuntos
Biocatálise , NADPH Oxidases/metabolismo , NAD/metabolismo , Piridoxaminafosfato Oxidase/metabolismo , Animais , Arabidopsis/enzimologia , Domínio Catalítico , Escherichia coli/enzimologia , Técnicas de Inativação de Genes , Células HCT116 , Humanos , Fígado/enzimologia , Camundongos , Monoaminoxidase/química , Monoaminoxidase/metabolismo , NADPH Oxidases/isolamento & purificação , Nostoc/enzimologia , Oxirredução , Piridoxaminafosfato Oxidase/química , Ratos , Saccharomyces cerevisiae/enzimologia , Transfecção
2.
Biochem J ; 460(1): 49-58, 2014 May 15.
Artigo em Inglês | MEDLINE | ID: mdl-24611804

RESUMO

Hydration of NAD(P)H to NAD(P)HX, which inhibits several dehydrogenases, is corrected by an ATP-dependent dehydratase and an epimerase recently identified as the products of the vertebrate Carkd (carbohydrate kinase domain) and Aibp (apolipoprotein AI-binding protein) genes respectively. The purpose of the present study was to assess the presence of these enzymes in mammalian tissues and determine their subcellular localization. The Carkd gene encodes proteins with a predicted mitochondrial propeptide (mCARKD), a signal peptide (spCARKD) or neither of them (cCARKD). Confocal microscopy analysis of transfected CHO (Chinese-hamster ovary) cells indicated that cCARKD remains in the cytosol, whereas mCARKD and spCARKD are targeted to the mitochondria and the endoplasmic reticulum respectively. Unlike the other two forms, spCARKD is N-glycosylated, supporting its targeting to the endoplasmic reticulum. The Aibp gene encodes two different proteins, which we show to be targeted to the mitochondria (mAIBP) and the cytosol (cAIBP). Quantification of the NAD(P)HX dehydratase and epimerase activities in rat tissues, performed after partial purification, indicated that both enzymes are widely distributed, with total activities of ≈3-10 nmol/min per g of tissue. Liver fractionation by differential centrifugation confirmed the presence of the dehydratase and the epimerase in the cytosol and in mitochondria. These data support the notion that NAD(P)HX repair is extremely widespread.


Assuntos
Proteínas de Transporte/metabolismo , Citosol/enzimologia , Reparo do DNA/genética , Mitocôndrias/enzimologia , NADP/metabolismo , Fosfoproteínas/metabolismo , Fosfotransferases (Aceptor do Grupo Álcool)/genética , Fatores de Transcrição/genética , Processamento Alternativo/genética , Sequência de Aminoácidos , Animais , Células CHO , Proteínas de Transporte/genética , Cricetinae , Cricetulus , Proteínas de Ligação a DNA , Retículo Endoplasmático/enzimologia , Retículo Endoplasmático/genética , Células HEK293 , Humanos , Camundongos , Mitocôndrias/genética , Dados de Sequência Molecular , NADP/genética , Fosfoproteínas/genética , Fosfotransferases (Aceptor do Grupo Álcool)/química , Racemases e Epimerases , Ratos , Frações Subcelulares/enzimologia , Distribuição Tecidual/genética , Fatores de Transcrição/química
3.
J Biol Chem ; 286(48): 41246-41252, 2011 Dec 02.
Artigo em Inglês | MEDLINE | ID: mdl-21994945

RESUMO

The reduced forms of NAD and NADP, two major nucleotides playing a central role in metabolism, are continuously damaged by enzymatic or heat-dependent hydration. We report the molecular identification of the eukaryotic dehydratase that repairs these nucleotides and show that this enzyme (Carkd in mammals, YKL151C in yeast) catalyzes the dehydration of the S form of NADHX and NADPHX, at the expense of ATP, which is converted to ADP. Surprisingly, the Escherichia coli homolog, YjeF, a bidomain protein, catalyzes a similar reaction, but using ADP instead of ATP. The latter reaction is ascribable to the C-terminal domain of YjeF. This represents an unprecedented example of orthologous enzymes using either ADP or ATP as phosphoryl donor. We also show that eukaryotic proteins homologous to the N-terminal domain of YjeF (apolipoprotein A-1-binding protein (AIBP) in mammals, YNL200C in yeast) catalyze the epimerization of the S and R forms of NAD(P)HX, thereby allowing, in conjunction with the energy-dependent dehydratase, the repair of both epimers of NAD(P)HX. Both enzymes are very widespread in eukaryotes, prokaryotes, and archaea, which together with the ADP dependence of the dehydratase in some species indicates the ancient origin of this repair system.


Assuntos
Difosfato de Adenosina/química , Trifosfato de Adenosina/química , Proteínas de Escherichia coli/química , Escherichia coli/enzimologia , Hidroliases/química , Peptídeos e Proteínas de Sinalização Intracelular/química , NADP/química , NAD/análogos & derivados , Proteínas de Saccharomyces cerevisiae/química , Saccharomyces cerevisiae/enzimologia , Difosfato de Adenosina/genética , Difosfato de Adenosina/metabolismo , Trifosfato de Adenosina/genética , Trifosfato de Adenosina/metabolismo , Animais , Escherichia coli/genética , Proteínas de Escherichia coli/genética , Proteínas de Escherichia coli/metabolismo , Hidroliases/genética , Hidroliases/metabolismo , Peptídeos e Proteínas de Sinalização Intracelular/genética , Peptídeos e Proteínas de Sinalização Intracelular/metabolismo , Camundongos , NAD/química , NAD/genética , NAD/metabolismo , NADP/genética , NADP/metabolismo , Estrutura Terciária de Proteína , Saccharomyces cerevisiae/genética , Proteínas de Saccharomyces cerevisiae/genética , Proteínas de Saccharomyces cerevisiae/metabolismo , Homologia de Sequência de Aminoácidos
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