Successional effects of cover cropping and deep tillage on suppression of plant-parasitic nematodes and soilborne fungal pathogens.

BACKGROUND: Cover crops can suppress soilborne nematodes and fungal pathogens by serving as a poor host to pathogens and producing allelopathic compounds. Yet, cultural practices can influence their effectiveness. Cover crop and weedy fallow rotations and their interactions with deep tillage were evaluated from 2019 to 2021 in a three-season vegetable cropping system (spring tomato, fall squash, and winter cabbage) for their suppressive effects on soilborne diseases. Experimental plots were arranged in a split-plot 2 × 4 factorial design in randomized complete blocks. Whole-plot tillage treatments were shallow-tilled or deep-tilled. Subplots had two factors of crop rotations: rotation type (cover crop [spring or fall sunn hemp or winter rye] or weedy fallow) and rotation season. RESULTS: Independent of tillage practice, sunn hemp and weedy fallow reduced population density and root galling severity of root-knot nematode (Meloidogyne incognita) for the first subsequent vegetable compared to the all-vegetable rotation (P < 0.05) but had little effect on fungal pathogens. Fall sunn hemp had higher plant biomass and reduced gall severity for the second subsequent vegetable. Spring and fall sunn hemp improved vegetable yields. Winter rye only reduced ring nematodes (Mesocriconema spp.) population density in the first subsequent vegetable. Deep tillage reduced incidence of fungal pathogens of Rhizoctonia solani and Sclerotinia sclerotiorum, and population density of stubby-root nematode (Nanidorus minor). CONCLUSION: Sunn hemp is effective in suppressing M. incognita, whereas deep tillage can be used to suppress R. solani, S. sclerotiorum, and N. minor in vegetable production systems. © 2023 Society of Chemical Industry.

Identification, Diversity, and Distribution of Meloidogyne spp. in Vegetable Fields of South Georgia, U.S.A.

Root-knot nematode (RKN; Meloidogyne spp.) is the most prevalent plant-parasitic nematode in vegetable fields of Georgia, with an incidence of 67.3%. Because aggressive RKN species are reported in the southeastern United States, molecular-based identification of RKN species was conducted on soil samples taken from a nematode surveillance study in 2018 from 292 RKN-infested vegetable fields in southern Georgia. The RKN-infested soil was potted with tomato cultivar Rutgers, and individual nematode females were isolated from galled roots and subjected to species-specific PCR and mitochondrial haplotype-based RKN species identification. The incidence (%), mean, and maximum relative abundance (second-stage juveniles per 100 cm3 of soil) of the five RKN species identified consisted of M. incognita (91.9, 486, 14,144), M. arenaria (36.0, 707, 14,144), M. floridensis (2.2, 909, 5,264), M. javanica (5.5, 352, 1,488), and M. haplanaria (0.7, 8, 14). A large proportion of fields (29%) had mixed populations of M. incognita and M. arenaria, which may reflect the region's long history of cotton and peanut cultivation. For unknown reasons, mixed populations of M. incognita and M. arenaria were associated with higher population densities. M. incognita is the most important RKN species in vegetable fields, followed by M. arenaria; therefore, pure or mixed populations of these species should be addressed in nematode management programs. Although at a lower incidence, the newly detected species, M. floridensis and M. haplanaria, have the potential to become a major threat since they reproduce on vegetables with Mi-resistant genes.

Identification and Virulence of Five Isolates of Root-Knot Nematode Meloidogyne floridensis on Vegetables.

Meloidogyne floridensis is of particular concern because it reproduces on tomato, pepper, corn, and tobacco cultivars that have resistance to the common tropical root-knot nematode (RKN) species (i.e., Meloidogyne incognita, M. arenaria, and M. javanica). During a survey of 436 randomly selected vegetable fields in Georgia in 2018, 6 M. floridensis-infested fields were found and cultured from single egg-mass isolates on a susceptible tomato (cultivar Rutgers), and speciated using molecular analyses. Five isolates of M. floridensis were identified from collard, cowpea, cucumber, watermelon, and tomato fields by DNA sequence-based identification targeting mitochondrial genes (cytochrome c oxidase subunit II, transfer RNAHis, large subunit ribosomal RNA, and NADH dehydrogenase subunit 5). Two greenhouse trials determined the host preference and reproduction level for each M. floridensis isolate. Evaluations were conducted on Rutgers tomato, a resistant tomato (cultivar Skyway, carrying the Mi-1.2 gene), and vegetable crops associated with the origin of M. floridensis populations. This study confirmed that most associated vegetables, except collards, were good hosts to M. floridensis, having a reproduction factor >1. All isolates were able to reproduce aggressively on the resistant tomato. We found variations among M. floridensis isolates in pathogenicity and reproduction levels on the vegetable crops tested which should be considered when using or developing host resistance.

Identification of Four Populations of Meloidogyne incognita in Georgia, United States, Capable of Parasitizing Tomato-Bearing Mi-1.2 Gene.

Meloidogyne incognita, the southern root-knot nematode (RKN), is the most predominant plant-parasitic nematode species of tomato and causes significant yield loss. The Mi-1.2 gene confers resistance in tomatoes to M. incognita; however, virulent RKN populations capable of parasitizing resistant tomato cultivars have been reported from different regions in the world. Four naturally occurring virulent populations of M. incognita were found in vegetable fields from four counties in Georgia with no history of tomato cultivation of the Mi gene. Two consecutive greenhouse trials showed that all four virulent RKN populations reproduced on tomato cultivars, including Amelia, Skyway, and Myrtle, with the Mi-1 gene, while an avirulent population of M. incognita race 3 was unable to overcome host resistance. Virulent RKN populations varied in reproduction among resistant cultivars, with Ma6 population having the greatest reproduction potential. No difference in penetration potential of the virulent (Ma6) and avirulent populations was found on susceptible and resistant tomato cultivars. However, virulent Ma6 population females were successful at egg-laying, whereas avirulent female development was arrested in the resistant cultivars. The virulent Ma6 population also induced feeding sites in the roots of resistant cultivars, whereas the avirulent population did not. To our knowledge, this is the first report of resistance-breaking populations of M. incognita in Georgia and the second state in the United States after California.

Influence of the Environment and Vegetable Cropping Systems on Plant-Parasitic Nematode Communities in Southern Georgia.

Plant-parasitic nematodes (PPN) limit yields of vegetable production in the United States. During the spring and fall cropping seasons of 2018, 436 fields in bare ground and plastic bed cropping systems were randomly sampled from 29 counties in southern Georgia. The incidence (%), mean relative abundance, and maximum relative abundance (nematodes per 100 cm3 of soil) of the 10 different PPN genera detected in 32 vegetable crops in bare ground and plastic bed cropping systems include Meloidogyne spp. (67.3%; mean, 292; maximum, 14,144), Nanidorus spp. (49.4%; mean, 6; maximum, 136), Mesocriconema spp. (39.6%; mean, 17; maximum, 340), Helicotylenchus spp. (31.6%; mean, 20; maximum, 1152), Pratylenchus spp. (20.1%; mean, 2; maximum, 398), Rotylenchulus spp. (5.9%; mean, 1; maximum, 116), Hoplolaimus spp. (12.6%; mean, 1; maximum, 78), Heterodera spp. (2.3%; mean, <1; maximum, 60), Tylenchorhynchus spp. (0.9%; mean, <1; maximum, 12), and Xiphinema spp. (0.2%; mean, <1; maximum, 2). A nonmetric multidimensional scaling analysis indicated that most environmental and geological factors (i.e., longitude, precipitation, soil moisture, sand and silt content, and soil electrical conductivity) had no apparent relationship with nematode counts, except for latitude, soil pH, and temperature. The multirank permutation procedure followed by indicator species analysis and nonparametric Kruskal-Wallis analysis of variance indicated that Meloidogyne spp. are the predominant PPN associated with plastic beds in the south region sampled. The south region consisted mainly of commercial fields that rotated multiple vegetables crops through the same plastic beds. All other PPNs were associated with bare ground beds in the north region that are commonly rotated with row crops. This study validates that Meloidogyne spp. are the most important PPN in vegetable fields of southern Georgia and suggests that cropping systems have a greater effect on PPN population dynamics than the environment.

First Report of the Root-Knot Nematode, Meloidogyne floridensis, on Tomato in Georgia, USA.

Meloidogyne floridensis, also known as the peach root-knot nematode (RKN), is a new emerging species found to break crop host-resistance to M. incognita (Stanley et al. 2009). It was first described from Florida (Handoo et al. 2004) parasitizing M. incognita-resistant rootstock cultivars of peach (Prunus persica), and tomato (Solanum lycopersicum) (Church 2005). The nematode has recently been reported in California's almond orchards (Westphal et al. 2019) and peach rootstock (cv. Guardian) in South Carolina (Reighard et al. 2019). In a 2018 survey of vegetable fields sampled randomly in South Georgia, RKN was found with a high density (5,264 second-stage juveniles (J2)/100 cm3 of soil) from a tomato field in Ware County, GA. The soil sample consist of 30 soil cores sampled at 20-cm depth across the field in a zig-zag motion. To perform Koch's postulate, 2,000 eggs from a single egg-mass culture were inoculated into deepots filled with mixture of sand and sterilized field soil (1:1 v/v) and grown with tomato cv. Rutgers for 60 days in the greenhouse. A reproduction factor of 21.1 ± 6.1 was obtained confirming the nematode parasitism on tomato (Fig. 1S). For molecular identification, DNA was extracted by smashing three individual females isolated from the galled roots in 50 µl sterile distilled water, followed by a freeze-thaw (95°C, 1 min). Results of PCR analyzes by species-specific primers (Fjav/Rjav, Finc/Rinc and Far/Rar) did not detect the nematode species (Zijlstra et al. 2000). PCR products were obtained and sequenced from two primer sets consisting of the forward NAD5F2 (5'-TATTTTTTGTTTGAGATATATTAG-3') and the reverse NAD5R1 (5'-CGTGAATCTTGATTTTCCATTTTT-3') for amplification of a fragment of the NADH dehydrogenase subunit 5 (NADH5) gene (Janssen et al. 2016), and the forward TRANH (5'-TGAATTTTTTATTGTGATTAA-3') and the reverse MRH106 (5'-AATTTCTAAAGACTTTTCTTAGT-3') for amplification covering a portion of the cytochrome c oxidase subunit II (COII) and large subunit 16SrDNA (16S) gene (Stanton et al. 1997). DNA sequence of NADH5 gene fragment (accession no. MT795954) was 100% identical (532/532 bp) with a M. floridensis isolate from California and South Carolina (accession no. MH729181 and MN072363), while fragment of the COII and 16S genes (accession no. MT787563) was 99.76% identical (421/422 bp) with an isolate from Florida (accession no. DQ228697). The nematode females were also used for morphometric and perennial pattern analysis. Several micrographs with the inverted microscope (ZEISS Axio Vert.A1, Germany) and camera (ZEISS Axiocam 305 color, Germany) were taken from ten J2s for mean, standard deviation and range of body length: 362.7 ± 11.2 (340.4-379) µm, maximum body width: 15 ± 1.3 (12.4-16.4) µm, stylet length: 12.3 ± 1.3 (9.5-14) µm, hyaline tail terminus: 8.9 ± 1.1 (7.5-10.9) µm and tail length: 35.7 ± 4.4 (28.5-39.5) µm. Morphological measurements and configuration of perineal patterns (Fig. 2S) were comparable to previous reports of M. floridensis isolates from Florida (Handoo et al. 2004; Stanley et al. 2009). To the best of our knowledge, this is the first report of M. floridensis in Georgia as the fourth state in the USA after South Carolina, California and Florida. This nematode has been reported to parasitize several vegetable crops, including cucumber, eggplant, tomato, snap bean and squash. Furthermore, RKN resistant cultivars of tomato (harboring Mi-1 gene), pepper (harboring N gene), corn cv. Mp-710 and tobacco cv. NC 95 have been found susceptible to M. floridensis (Stanley et al. 2009), making it a serious threat.