Liouvillian of the Open STIRAP Problem.

With the corresponding Liouvillian as a starting point, we demonstrate two seemingly new phenomena of the STIRAP problem when subjected to irreversible losses. It is argued that both of these can be understood from an underlying Zeno effect, and in particular both can be viewed as if the environment assists the STIRAP population transfer. The first of these is found for relative strong dephasing, and, in the language of the Liouvillian, it is explained from the explicit form of the matrix generating the time-evolution; the coherence terms of the state decay off, which prohibits further population transfer. For pure dissipation, another Zeno effect is found, where the presence of a non-zero Liouvillian gap protects the system's (adiabatic) state from non-adiabatic excitations. In contrast to full Zeno freezing of the evolution, which is often found in many problems without explicit time-dependence, here, the freezing takes place in the adiabatic basis such that the system still evolves but adiabatically.

Transcriptomic and functional analysis of NaCl-induced stress in Enterococcus faecalis.

The robust physiology of Enterococcus faecalis facilitates tolerance to various stresses. We here report the transcriptional response of E. faecalis V583 to growth in the presence of 6.5% NaCl. Among the early responses observed was an immediate down-regulation of mscL, accompanied by an up-regulation of genes predicted to be involved in uptake of extracellular potassium and glycine betaine. The high NaCl concentration also induced expression of chaperons and cell envelope related traits, such as the enterococcal polysaccharide antigen (epa) locus. Functional genetic analysis revealed reduced salt stress resistance in both epaB and epaE mutants. The reduced salt resistance phenotype associated with the epaB mutant was restored by complementation, hence demonstrating a role of Epa in the physiological robustness of E. faecalis. Furthermore, we demonstrate that Epa confers increased resistance towards multiple cell envelope stress-inducing factors. Accordingly, these findings delineate a potential link between the robust nature of E. faecalis and its ability to perform as a human pathogen, and provide a new perspective on the mechanisms by which Epa contributes to virulence. Notably, the high NaCl concentration also resulted in strict repression of the gelE-sprE operon and impaired gelatinase activity. We demonstrate that NaCl antagonize the GBAP-pheromone dependent induction in a concentration dependent manner.