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1.
Biophys J ; 115(12): 2327-2335, 2018 12 18.
Artigo em Inglês | MEDLINE | ID: mdl-30527445

RESUMO

Phosphoproteomics studies have reported phosphorylation at multiple sites within collagen, raising the possibility that these post-translational modifications regulate the physical or biological properties of collagen. In this study, molecular dynamics simulations and experimental studies were carried out on model peptides to establish foundational principles of phosphorylation of Ser residues in collagen. A (Gly-Xaa-Yaa)11 peptide was designed to include a Ser-containing sequence from type I collagen that was reported to be phosphorylated. The physiological kinase involved in collagen phosphorylation is not known. In vitro studies showed that a model kinase ERK1 (extracellular signal-regulated protein kinase 1) would phosphorylate Ser within the consensus sequence if the collagen-like peptide is in the denatured state but not in the triple-helical state. The peptide was not a substrate for FAM20C, a kinase present in the secretory pathway, which has been shown to phosphorylate many extracellular matrix proteins. The unfolded single chain (Gly-Xaa-Yaa)11 peptide containing phosphoSer was able to refold to form a stable triple helix but at a reduced folding rate and with a small decrease in thermal stability relative to the nonphosphorylated peptide at neutral pH. These biophysical studies on model peptides provide a basis for investigations into the physiological consequences of collagen phosphorylation and the application of phosphorylation to regulate the properties of collagen biomaterials.


Assuntos
Colágeno Tipo I/química , Colágeno Tipo I/metabolismo , Proteína Quinase 3 Ativada por Mitógeno/metabolismo , Serina/metabolismo , Sequência de Aminoácidos , Simulação de Dinâmica Molecular , Fragmentos de Peptídeos/química , Fragmentos de Peptídeos/metabolismo , Fosforilação , Conformação Proteica em alfa-Hélice , Dobramento de Proteína , Estabilidade Proteica
2.
J Struct Biol ; 203(3): 247-254, 2018 09.
Artigo em Inglês | MEDLINE | ID: mdl-29763735

RESUMO

Cleavage of collagen by collagenases such as matrix metalloproteinase 1 (MMP-1) is a key step in development, tissue remodeling, and tumor proliferation. The abundant heterotrimeric type I collagen composed of two α1(I) chains and one α2(I) chain is efficiently cleaved by MMP-1 at a unique site in the triple helix, a process which may be initiated by local unfolding within the peptide chains. Atypical homotrimers of the α1(I) chain, found in embryonic and cancer tissues, are very resistant to MMP cleavage. To investigate MMP-1 cleavage, recombinant homotrimers were constructed with sequences from the MMP cleavage regions of human collagen chains inserted into a host bacterial collagen protein system. All triple-helical constructs were cleaved by MMP-1, with α2(I) homotrimers cleaved efficiently at a rate similar to that seen for α1(II) and α1(III) homotrimers, while α1(I) homotrimers were cleaved at a much slower rate. The introduction of destabilizing Gly to Ser mutations within the human collagenase susceptible region of the α2(I) chain did not interfere with MMP-1 cleavage. Molecular dynamics simulations indicated a greater degree of transient hydrogen bond breaking in α2(I) homotrimers compared with α1(I) homotrimers at the MMP-1 cleavage site, and showed an extensive disruption of hydrogen bonding in the presence of a Gly to Ser mutation, consistent with chymotrypsin digestion results. This study indicates that α2(I) homotrimers are susceptible to MMP-1, proves that the presence of an α1(I) chain is not a requirement for α2(I) cleavage, and supports the importance of local unfolding of α2(I) in collagenase cleavage.


Assuntos
Colágeno Tipo I/química , Colagenases/química , Metaloproteinase 1 da Matriz/química , Neoplasias/genética , Sequência de Aminoácidos/genética , Proteínas de Bactérias/química , Proteínas de Bactérias/genética , Sítios de Ligação , Proliferação de Células/genética , Colágeno/química , Colágeno/genética , Colágeno Tipo I/genética , Colagenases/genética , Humanos , Ligação de Hidrogênio , Metaloproteinase 1 da Matriz/genética , Simulação de Dinâmica Molecular , Neoplasias/patologia , Ligação Proteica , Conformação Proteica , Conformação Proteica em alfa-Hélice/genética , Streptococcus pyogenes/química
3.
J Struct Biol ; 203(3): 255-262, 2018 09.
Artigo em Inglês | MEDLINE | ID: mdl-29758270

RESUMO

Gly missense mutations in type I collagen, which replace a conserved Gly in the repeating (Gly-Xaa-Yaa)n sequence with a larger residue, are known to cause Osteogenesis Imperfecta (OI). The clinical consequences of such mutations range from mild to lethal, with more serious clinical severity associated with larger Gly replacement residues. Here, we investigate the influence of the identity of the residue replacing Gly within and adjacent to the integrin binding 502GFPGER507 sequence on triple-helix structure, stability and integrin binding using a recombinant bacterial collagen system. Recombinant collagens were constructed with Gly substituted by Ala, Ser or Val at four positions within the integrin binding region. All constructs formed a stable triple-helix structure with a small decrease in melting temperature. Trypsin was used to probe local disruption of the triple helix, and Gly to Val replacements made the triple helix trypsin sensitive at three of the four sites. Any mutation at Gly505, eliminated integrin binding, while decreased integrin binding affinity was observed in the replacement of Gly residues at Gly502 following the order Val > Ser > Ala. Molecular dynamics simulations indicated that all Gly replacements led to transient disruption of triple-helix interchain hydrogen bonds in the region of the Gly replacement. These computational and experimental results lend insight into the complex molecular basis of the varying clinical severity of OI.


Assuntos
Colágeno Tipo I/química , Osteogênese Imperfeita/genética , Conformação Proteica , Sequência de Aminoácidos/genética , Substituição de Aminoácidos/genética , Dicroísmo Circular , Colágeno Tipo I/genética , Colágeno Tipo I/ultraestrutura , Glicina/genética , Humanos , Ligação de Hidrogênio , Mutação de Sentido Incorreto , Osteogênese Imperfeita/patologia , Ligação Proteica , Dobramento de Proteína , Estrutura Secundária de Proteína
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