Underwater noise assessment outside harbor areas: The case of Port of Civitavecchia, northern Tyrrhenian Sea, Italy.

Underwater noise assessment is particularly important in coastal areas where a wide range of natural and anthropogenic sounds generate complex and variable soundscapes. In the last century, the number and size of noise sources has increased significantly, thereby increasing the ocean's background noise. Shipping is the main source of lower-frequency underwater noises (<500 Hz). This research aimed to provide an initial assessment of underwater noise levels in a coastal area of the northern Tyrrhenian Sea (Italy) using short-term recordings. Spatial and temporal variations in the noise level, and the type and number of ships sailing through the port were recorded. A significant correlation was found between ferry boats and sound pressure levels, indicating their role as a prevalent source of low frequency underwater noise in the project area. This research could provide the baseline for implementation of distribution and point-source underwater noise models that are required for sustainable coastal management.

Computational modeling of immune system of the fish for a more effective vaccination in aquaculture.

MOTIVATION: A computational model equipped with the main immunological features of the sea bass (Dicentrarchus labrax L.) immune system was used to predict more effective vaccination in fish. The performance of the model was evaluated by using the results of two in vivo vaccinations trials against L. anguillarum and P. damselae. RESULTS: Tests were performed to select the appropriate doses of vaccine and infectious bacteria to set up the model. Simulation outputs were compared with the specific antibody production and the expression of BcR and TcR gene transcripts in spleen. The model has shown a good ability to be used in sea bass and could be implemented for different routes of vaccine administration even with more than two pathogens. The model confirms the suitability of in silico methods to optimize vaccine doses and the immune response to them. This model could be applied to other species to optimize the design of new vaccination treatments of fish in aquaculture. AVAILABILITY AND IMPLEMENTATION: The method is available at http://www.iac.cnr.it/∼filippo/c-immsim/. CONTACT: nromano@unitus.it. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.