[Comparison of the tests polymerase chain reaction, serology, and blood culture with respect to sensitivity and specificity for detection of Brucella spp in human samples]. / Comparación de las pruebas: reacción en cadena de la polimerasa (PCR), serología y hemocultivo con respecto a sensibilidad y especificidad, para la detección de Brucella spp en muestras humanas.

OBJECTIVE: The aim of this study was to evaluate the sensitivity and specificity of polymerase chain reaction for detection of Brucella spp in human blood samples compared with the serological tests and blood culture. MATERIAL AND METHODS: In 2005, a total of 92 people were sampled from the towns of Anahuac and Sabinas Hidalgo, Nuevo Leon, where an outbreak of human cases had taken place in the same year as this study. The sera collected were analyzed by serological tests according to the NOM 022-SS2-1994. DNA was obtained using CTAB extraction method and it was used to amplify a fragment of 223 bp of the coding sequence for a protein of 31 kDa present in all Brucella species. RESULTS: The polymerase chain reaction test detected 23 positive samples. The sensitivity and specificity compared with RB was 44.68 and 95.56%, respectively. Compared with mouse antibody production, it was 51.61 and 88.52%, and 2-mercaptoethanol was 53.57 and 87.50%. When isolation (positives cultures) was compared with polymerase chain reaction, we obtained 100.0% sensitivity and 80.23% specificity, taking into account people with positive and negative serology. CONCLUSIONS: The polymerase chain reaction test can be an alternative tool to bacterial culture in human brucellosis diagnosis.

Identification of Salmonella serotypes isolated from cantaloupe and chile pepper production systems in Mexico by PCR-restriction fragment length polymorphism.

A study was conducted in 2006 to determine the prevalence of Salmonella on three cantaloupe farms in Matamoros, Coahuila, Mexico, and on one farm that cultivates chile peppers var. Bell in Culiacán, Sinaloa, Mexico. Samples from cantaloupe farms consisted of cantaloupe rinses, irrigation water, water from furrows in the field, and workers' hands. Samples from the chile pepper farm consisted of rinses of chile peppers obtained at the field, pepper rinses obtained at the packing house, and irrigation water from the field. A total of 55 samples were obtained from both production systems. Twelve and 10 samples from the cantaloupe and chile pepper production systems, respectively, tested positive for Salmonella according to a traditional culture method. The difference between the proportion of Salmonella-positive samples from the cantaloupe production system (12 of 28 = 0.43) and the chile pepper production system (10 of 27 = 0.37) was not statistically significant (P > 0.05). A PCR-restriction fragment length polymorphism (RFLP) method based on the fliC gene was used to determine the serotype of the isolates. Salmonella Typhimurium was the only serotype found associated with the cantaloupe production system, whereas both Salmonella Typhimurium and Enteritidis serotypes were found associated with the chile pepper production system. Results showed that 91% (20 of 22) and 9% (2 of 22) of the isolates from both agricultural systems matched with the Salmonella Typhimurium and Salmonella Enteritidis reference strain restriction profiles, respectively. This study demonstrates the utility of the PCR-RFLP technique for determining the serotypes of Salmonella isolates obtained from cantaloupe and chile pepper production systems.

Molecular epidemiology of Mycobacterium bovis: usefulness in international trade.

Tuberculosis (TB) represents a barrier for free trade of livestock between Mexico and the United States of America (US). In spite of efforts from Mexico to export TB-free animals, some of those found with TB lesions in slaughterhouses in the US are traced back to that country. Therefore, the purpose of this study was to determine, through molecular epidemiology, the most probable source of infection for cattle found with TB lesions in the US. Ninety M. bovis isolates, 50 from Mexico obtained from cattle in 8 different states, and 40 from the US from cattle, deer, elk and feral pigs from 7 different states were included in the study. All samples were analyzed in both laboratories, Mexico and the US, following the same protocol for molecular analysis by spoligotyping. Twenty-seven clusters, ranging from 1 to 18 genetically similar strains were found. Some clustering by country was observed, strains from cattle and deer in Michigan in the US fell into the same cluster, suggesting transmission between species. These results, combined with epidemiological information suggest that despite of the possibility that some animals with lesions in the US come from Mexico as false negatives, the US has its own source of infection, must probably in dairy cattle and wildlife. Genetic diversity of isolates from Mexico was larger than that in the US, which could be a consequence of the endemic status of the disease and the indiscriminate movement of animals between regions.

Use of the Brucella melitensis native hapten to diagnose brucellosis in goats by a rapid, simple, and specific fluorescence polarization assay.

The performance of the fluorescence polarization assay (FPA) using the recently described Brucella melitensis native hapten and the Brucella abortus O-polysaccharide tracer was evaluated and compared with those of The World Organization for Animal Health tests related to indirect and competitive enzyme-linked immunosorbent assays as classification variables for goat sera obtained from a high-prevalence area where vaccination was performed; test series were also evaluated to increase the final specificity of the tests. Our results showed that the respective relative sensitivity and specificity were 99.7% and 32.5% for the rose Bengal test with a 3% cell concentration (RBT3), 92.8% and 68.8% for the rose Bengal test with 8% cell concentration (RBT8), 98.4% and 84.9% for the Canadian complement fixation test (CFT), 83.7% and 65.5% for the Mexican CFT, 98.4% and 81.0% for the buffered plate agglutination test (BPAT), and 78.1% and 89.3% for the fluorescence polarization assay (FPA). The use of the FPA as the secondary test significantly increased the final specificities of test combinations; the screening tests BPAT, RBT3, and RBT8 plus FPA resulted in 90%, 91.2%, and 91.3% final specificities, respectively, whereas for the combinations RBT3 plus Mexican CFT, RBT8 plus Mexican CFT, and BPAT plus Canadian CFT, the specificities were 65.5%, 63.2%, and 91.7%, respectively. The results suggested that the FPA may be routinely applied as an adaptable screening test for diagnosis of goat brucellosis, since its cutoff can be adjusted to improve its sensitivity or specificity, it is a rapid and simple test, it can be the test of choice when specificity is relevant or when an alternative confirmatory test is not available, and it is not affected by vaccination, thus reducing the number of goats wrongly slaughtered due to misdiagnosis.

Correlación entre PCR en exudado nasal y la reacción de tuberculina para la detección de organismos del complejo Mycobacterium tuberculosis en bovinos / Correlation between PCR and tuberculin test for detection of Mycobacterium tuberculosis complex organisms in bovine cattle

En México, la tuberculosis (TB) es motivo de regionalización del país de acuerdo a la prevalencia, por tal motivo, la comercialización y/o exportación de bovinos, así como su movilización, es restringida. El diagnóstico oficial de la TB en bovinos en campo se realiza con la prueba de tuberculina, y posmorten con histopatología y/o por aislamiento del agente etiológico. Aunque la prueba de la tuberculina tiene baja especificidad, es suficiente para enviar animales reactores a sacrificio, lo que no garantiza que el animal esté infectado. Lo anterior, hace patente la necesidad de métodos más sensibles y específicos. En la presente investigación se analizaron muestras de exudado nasal de bovinos, para detectar microorganismos del complejo Mycobacterium tuberculosis mediante la prueba de reacción en cadena de la polimerasa (PCR). Todos los animales positivos a la tuberculina se consideraron como animales infectados y éstos fueron comparados con los positivos a PCR. Se muestrearon 420 animales provenientes de zonas de alta y baja prevalencia. El ADN de los exudados nasales se obtuvo con el método de extracción bromuro de cetiltrimetilamonio, y éste se utilizó en una PCR anidada para amplificar dos fragmentos (583 pb y 200 pb) de la secuencia IS6110 del complejo M. tuberculosis. La prueba de PCR logró detectar un mayor número de muestras positivas en las zonas de alta prevalencia (57 por ciento), comparada con las zonas de baja prevalencia (20 por ciento). La sensibilidad de la prueba de PCR fue del 90,5 por ciento y la especificidad del 58,3 por ciento, comparada con la prueba de tuberculina. Quedó demostrado que la prueba de PCR en secreciones nasales puede utilizarse en situaciones de compra-venta o en exposiciones ganaderas como un análisis de tamizaje para prevenir el contagio y la introducción de la enfermedad a rebaños sanos.

In Mexico, the bovine tuberculosis (TB) is associated with both regionalization of the country, considering the levels of prevalence of the disease and restrictions in commercialization and/or exportation of cattle. In Mexico, the diagnosis of the bovine tuberculosis is conducted by using the tuberculin test in live animals, bacteriologic isolation and histopathological analysis in postmortem. Although the low sensibility of tuberculin test, is used to sent the animal reactors to slaughter and maybe the animal is not infected. Considering that some diagnosis methods are not sufficiently reliable and specific to detect the presence of the casual agent of this disease, the use of the polymerase chain reaction (PCR) test was evaluated from bovine nasal mucus. For the detection of the Mycobacterium tuberculosis complex, PCR of nasal mucus was better than Caudal-fold Tuberculin Test (CTT). The sensibility of PCR compared with CTT was 90.5% and specifity was 58.3%. The PCR of nasal mucus can use in buy and sell operations and cattle expositions to prevent the contagious and the introduction the pathogens in health cattle.

[Response to the treatment of brucellosis among children. Evaluation with Huddleson reaction and PCR]. / Respuesta al tratamiento de brucelosis en niños. Evaluación con reqcción de Huddleson y PCR.

INTRODUCTION: Brucellosis poses a significant public health problem and requires meticulous diagnosis; the outcome has frequent relapses even when the treatment is appropriate. OBJECTIVE: To evaluate the response to the treatment in children with brucellosis by means of Huddleson seroaglutination test and PCR. METHODS: Using a prospective design, a cohort of children with brucellosis was followed up by carrying out Huddleson seroaglutination test of and PCR for Brucella at 6, 12 and 24 weeks. Most of children were treated with trimetoprim + sulfametoxazole and rifampicine. The progress towards therapeutic failure or relapse was evaluated. RESULTS: Twenty-three children fulfilled the inclusion criteria. The median age was 4.7 years; 61 % had consumed potentially infected milk or dairy products. The duration of symptoms ranged from 7 days to 1 year. Brucella sp. was isolated in blood culture in two of 21 children and Brucella melitensis in myeloculture in one of four children. 69 % had positive Huddleson serological test from 1:160 to >1:12000. PCR tested positive in 100% of children when entering to the study. Six weeks after beginning treatment 17% of children had therapeutic failure. At 12 weeks, three children (13 %) persisted with positive PCR and their antimicrobial treatment was modified. At 24 weeks, five children (21.7 %) presented relapse. A child persisted positive in spite of modifying the antimicrobial scheme. The agreement between the two tests was low in the three follow-up periods (k = 0.08, k = 0.12 and k = 0.28 respectively). CONCLUSIONS: A 6-week treatment cannot be enough to eliminate Brucella. PCR test can be used to early identify relapses.