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1.
Biophys J ; 81(6): 3294-307, 2001 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-11720993

RESUMO

We conducted a deletion analysis of two regions identified in the II-III loop of alpha(1S), residues 671-690, which were shown to bind to ryanodine receptor type 1 (RyR1) and stimulate RyR1 channels in vitro, and residues 720-765 or the narrower 724-743 region, which confer excitation-contraction (EC) coupling function to chimeric dihydropyridine receptors (DHPRs). Deletion mutants were expressed in dysgenic alpha(1S)-null myotubes and analyzed by voltage-clamp and confocal fluo-4 fluorescence. Immunostaining of the mutant subunits using an N-terminus tag revealed abundant protein expression in all cases. Furthermore, the maximum recovered charge movement density was >80% of that recovered by full-length alpha(1S) in all cases. Delta671-690 had no effect on the magnitude of voltage-evoked Ca(2+) transients or the L-type Ca(2+) current density. In contrast, Delta720-765 or Delta724-743 abolished Ca(2+) transients entirely, and L-type Ca(2+) current was reduced or absent. Surprisingly, Ca(2+) transients and Ca(2+) currents of a moderate magnitude were recovered by the double deletion mutant Delta671-690/Delta720-765. A simple explanation for this result is that Delta720-765 induces a conformation change that disrupts EC coupling, and this conformational change is partially reverted by Delta671-690. To test for Ca(2+)-entry independent EC coupling, a pore mutation (E1014K) known to entirely abolish the inward Ca(2+) current was introduced. alpha(1S) Delta671-690/Delta720-765/E1014K expressed Ca(2+) transients with Boltzmann parameters identical to those of the Ca(2+)-conducting double deletion construct. The data strongly suggest that skeletal-type EC coupling is not uniquely controlled by alpha(1S) 720-765. Other regions of alpha(1S) or other DHPR subunits must therefore directly contribute to the activation of RyR1 during EC coupling.


Assuntos
Canais de Cálcio Tipo L/química , Sequência de Aminoácidos , Animais , Cálcio/metabolismo , Células Cultivadas , DNA Complementar/metabolismo , Di-Hidropiridinas/química , Eletrofisiologia , Deleção de Genes , Heterozigoto , Cinética , Camundongos , Microscopia Confocal , Microscopia de Fluorescência , Dados de Sequência Molecular , Músculo Esquelético/metabolismo , Músculos/citologia , Mutação , Ligação Proteica , Conformação Proteica , Estrutura Terciária de Proteína , Transfecção
2.
BMC Physiol ; 1: 8, 2001.
Artigo em Inglês | MEDLINE | ID: mdl-11495636

RESUMO

BACKGROUND: The multisubunit (alpha1S,alpha2-delta, beta1a and gamma1) skeletal muscle dihydropyridine receptor (DHPR) transduces membrane depolarization into release of Ca2+ from the sarcoplasmic reticulum (SR) and also acts as an L-type Ca2+ channel. To more fully investigate the function of the gamma1 subunit in these two processes, we produced mice lacking this subunit by gene targeting. RESULTS: Mice lacking the DHPR gamma1 subunit (gamma1 null) survive to adulthood, are fertile and have no obvious gross phenotypic abnormalities. The gamma1 subunit is expressed at approximately half the normal level in heterozygous mice (gamma1 het). The density of the L-type Ca2+ current in gamma1 null and gamma1 het myotubes was higher than in controls. Inactivation of the Ca2+ current produced by a long depolarization was slower and incomplete in gamma1 null and gamma1 het myotubes, and was shifted to a more positive potential than in controls. However, the half-activation potential of intramembrane charge movements was not shifted, and the maximum density of the total charge was unchanged. Also, no shift was observed in the voltage-dependence of Ca2+ transients. gamma1 null and gamma1 het myotubes had the same peak Ca2+ amplitude vs. voltage relationship as control myotubes. CONCLUSIONS: The L-type Ca2+ channel function, but not the SR Ca2+ release triggering function of the skeletal muscle dihydropyridine receptor, is modulated by the gamma1 subunit.


Assuntos
Canais de Cálcio Tipo L/fisiologia , Músculo Esquelético/fisiologia , Animais , Cálcio/metabolismo , Canais de Cálcio Tipo L/genética , Canais de Cálcio Tipo L/metabolismo , Células Cultivadas , Condutividade Elétrica , Marcação de Genes , Camundongos , Fibras Musculares Esqueléticas/fisiologia , Músculo Esquelético/metabolismo , Contração Miocárdica , Técnicas de Patch-Clamp , Subunidades Proteicas
3.
BMC Physiol ; 1: 15, 2001.
Artigo em Inglês | MEDLINE | ID: mdl-11806762

RESUMO

BACKGROUND: The L-type Ca2+ channel formed by the dihydropyridine receptor (DHPR) of skeletal muscle senses the membrane voltage and opens the ryanodine receptor (RyR1). This channel-to-channel coupling is essential for Ca2+ signaling but poorly understood. We characterized a single-base frame-shift mutant of alpha1S, the pore subunit of the DHPR, that has the unusual ability to function voltage sensor for excitation-contraction (EC) coupling by virtue of expressing two complementary hemi-Ca2+ channel fragments. RESULTS: Functional analysis of cDNA transfected dysgenic myotubes lacking alpha1S were carried out using voltage-clamp, confocal Ca2+ indicator fluoresence, epitope immunofluorescence and immunoblots of expressed proteins. The frame-shift mutant (fs-alpha1S) expressed the N-terminal half of alpha1S (M1 to L670) and the C-terminal half starting at M701 separately. The C-terminal fragment was generated by an unexpected restart of translation of the fs-alpha1S message at M701 and was eliminated by a M701I mutation. Protein-protein complementation between the two fragments produced recovery of skeletal-type EC coupling but not L-type Ca2+ current. DISCUSSION: A premature stop codon in the II-III loop may not necessarily cause a loss of DHPR function due to a restart of translation within the II-III loop, presumably by a mechanism involving leaky ribosomal scanning. In these cases, function is recovered by expression of complementary protein fragments from the same cDNA. DHPR-RyR1 interactions can be achieved via protein-protein complementation between hemi-Ca2+ channel proteins, hence an intact II-III loop is not essential for coupling the DHPR voltage sensor to the opening of RyR1 channel.


Assuntos
Canais de Cálcio Tipo L/genética , Canais de Cálcio Tipo L/fisiologia , Mutação da Fase de Leitura , Músculo Esquelético/fisiologia , Sequência de Aminoácidos , Animais , Sequência de Bases , Cálcio/metabolismo , Canais de Cálcio Tipo L/química , Células Cultivadas , Camundongos , Dados de Sequência Molecular , Contração Muscular , Fibras Musculares Esqueléticas/fisiologia , Músculo Esquelético/metabolismo , Técnicas de Patch-Clamp , Subunidades Proteicas
4.
Cancer ; 88(12): 2876-86, 2000 Jun 15.
Artigo em Inglês | MEDLINE | ID: mdl-10870075

RESUMO

BACKGROUND: A multidisciplinary panel representing various stakeholders in the health care delivery and oncology services marketplace was convened to develop specific criteria for healthcare purchasers to consider when evaluating the structures and processes of health plans. These rank ordered criteria also can be used by oncologic service providers and health plan designers as a yardstick for the services they offer. METHODS: A multidisciplinary 31-member Task Force was assembled by the Kerr L. White Institute and the American Cancer Society in March 1997. Task Force members were selected for their ability to offer expert insight as purchasers, suppliers, policymakers, consumers, or stakeholders in the health care marketplace. A preference-weighted majority voting rule was used to identify the three most important recommendations of the 10 that were generated through a modified Delphi technique. To test the practicality of the top three recommendations, leaders of large managed care organizations (MCOs) were surveyed; the results of this survey then were compared with the results of the Task Force survey. RESULTS: The three most important recommendations from the Task Force were that health plans provide access to: 1) comprehensive cancer care, 2) preventive and screening services, and 3) second opinions and treatment options supported by scientific evidence. The difference between the responses of the Task Force and the MCOs was that MCOs placed the highest importance on evidence-based decision-making, with their next three rankings coinciding with those identified by the Task Force. CONCLUSIONS: The value of these summary recommendations will be realized through their use by both purchasers and suppliers to influence the structure and content of the delivery of oncologic services.


Assuntos
Atenção à Saúde/economia , Compras em Grupo , Programas de Assistência Gerenciada/economia , Marketing de Serviços de Saúde , Oncologia/economia , Custos e Análise de Custo , Tomada de Decisões , Técnica Delphi , Guias como Assunto , Custos de Cuidados de Saúde , Setor de Assistência à Saúde , Pesquisas sobre Atenção à Saúde , Humanos
5.
J Neurosci ; 20(12): 4446-51, 2000 Jun 15.
Artigo em Inglês | MEDLINE | ID: mdl-10844013

RESUMO

Long-term potentiation (LTP) has several different phases, and there is general agreement that the late phase of LTP requires the activation of adenylyl cyclase (AC) and cAMP-dependent protein kinase (PKA). In contrast, several studies indicate that the early LTP is not affected by interfering with the cAMP pathway. We have further tested the role of the cAMP pathway in early LTP using several types of inhibitors. Bath application of the PKA inhibitor H89 suppressed the early LTP induced by a single tetanus. Similarly, the LTP induced by a pairing protocol was decreased by postsynaptic intracellular perfusion of the peptide PKA inhibitor PKI(6-22) amide. The decrease of LTP produced by these inhibitors was evident immediately after induction. These results indicate that PKA is important in early LTP, that its locus of action is postsynaptic, and that it does not act merely by enhancing the depolarization required for LTP induction. The failure of some other inhibitors of the cAMP pathway to affect the early phase of LTP might be attributable to the saturation of some step in the cAMP pathway during a tetanus. In agreement with this hypothesis we found that application of the AC inhibitor SQ 22536 by itself did not affect the early phase of LTP, but did produce a reduction if the cAMP pathway was already attenuated by the PKA inhibitor H89. Our analysis of the results of genetic modifications of the cAMP pathway, especially the work on AC knock-outs, indicates that the genetic data are generally consistent with the pharmacological results showing the importance of this pathway in early LTP.


Assuntos
AMP Cíclico/fisiologia , Inibidores Enzimáticos/farmacologia , Hipocampo/fisiologia , Peptídeos e Proteínas de Sinalização Intracelular , Potenciação de Longa Duração/fisiologia , Células Piramidais/fisiologia , Sulfonamidas , Sinapses/fisiologia , Adenina/análogos & derivados , Adenina/farmacologia , Inibidores de Adenilil Ciclases , Animais , Proteínas de Transporte/farmacologia , Proteínas Quinases Dependentes de AMP Cíclico/antagonistas & inibidores , Dimetil Sulfóxido/farmacologia , Técnicas In Vitro , Isoquinolinas/farmacologia , Cinética , Potenciação de Longa Duração/efeitos dos fármacos , Fragmentos de Peptídeos/farmacologia , Células Piramidais/efeitos dos fármacos , Ratos , Ratos Long-Evans , Sinapses/efeitos dos fármacos
6.
Cancer ; 82(10 Suppl): 2061-7, 1998 May 15.
Artigo em Inglês | MEDLINE | ID: mdl-9587108

RESUMO

BACKGROUND: Members of the oncology community, rich in data from years of published clinical research, epidemiology, and tumor registry information, expect businesses to evaluate the quality of cancer care using classic scientific methods. However, businesses lack sophistication in these data and tend to use significantly different criteria relating to cost, service, and access. Logistical problems also abound, such as the wide variety of cancers, small sample sizes, and the frequency with which patients change insurance plans. METHODS: Adapting an approach first proposed by Donabedian employing criteria that can be measured, easily gathered, and whose presence/absence can be interpreted as having a consequence for patient care, the author proposes a system of evaluating cancer health care benefits. CONCLUSIONS: Recognizing that classic outcomes analysis is too complex and inappropriate for business, companies and oncology providers may be able to develop obtainable measures whose presence or absence has intuitive and documented relation to the quality of cancer care.


Assuntos
Planos de Assistência de Saúde para Empregados/normas , Cobertura do Seguro/normas , Oncologia/economia , Oncologia/normas , Tomada de Decisões , Custos de Cuidados de Saúde , Acessibilidade aos Serviços de Saúde , Humanos , Benefícios do Seguro , Programas de Assistência Gerenciada/economia , Programas de Assistência Gerenciada/normas , Avaliação de Resultados em Cuidados de Saúde , Indicadores de Qualidade em Assistência à Saúde , Estados Unidos
7.
J Biol Chem ; 270(22): 13112-7, 1995 Jun 02.
Artigo em Inglês | MEDLINE | ID: mdl-7768906

RESUMO

Biological nitrogen fixation catalyzed by purified nitrogenase requires the hydrolysis of a minimum of 16 MgATP for each N2 reduced. In the present study, we demonstrate a central function for Lys-15 of Azotobacter vinelandii nitrogenase iron protein (FeP) in the interaction of nucleotides with nitrogenase. Changing Lys-15 of the FeP to Arg resulted in an FeP with a dramatically reduced affinity for both MgATP and MgADP. From equilibrium column binding experiments at different nucleotide concentrations, apparent dissociation constants (Kd) for wild type FeP binding of MgADP (143 microM) and MgATP (571 microM) were determined. Over the same nucleotide concentration ranges, the K15R FeP showed no significant affinity for either nucleotide. This contrasts sharply with previous results with an FeP in which Lys-15 was changed to Gln (K15Q) where it was found that the K15Q FeP bound MgADP with the same affinity as wild type FeP and MgATP with a slightly reduced affinity. Analysis of K15R FeP by EPR, circular dichroism (CD), and microcoulometry revealed that the [4Fe-4S] cluster was unaffected by the amino acid change and that addition of either MgADP or MgATP did not result in the protein conformational changes normally detected by these techniques. These results are integrated into a model for how MgATP and MgADP bind and induce conformational changes within the FeP.


Assuntos
Difosfato de Adenosina/metabolismo , Trifosfato de Adenosina/metabolismo , Azotobacter vinelandii/enzimologia , Lisina/metabolismo , Nitrogenase/metabolismo , Oxirredutases , Sequência de Aminoácidos , Dados de Sequência Molecular , Nitrogenase/química , Ligação Proteica , Conformação Proteica
8.
Curr Microbiol ; 30(6): 351-5, 1995 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-7773102

RESUMO

The putative products of six Azotobacter vinelandii chromosomal open reading frames (ORFs) were suggested to be involved in dihydrogen (H2) metabolism [Chen and Mortenson (1992) Biochim Biophys Acta 1131, 199-202]. A promoterless lacZ-containing cassette was used to disrupt the ORFs. Qualitative analysis revealed that the lacZ genes were expressed only in those mutants where the directions of the inserted lacZ were identical to those of the ORFs, showing that the six ORFs were transcribed as predicted. Unlike wildtype (w.t.), none of the mutants could perform dioxygen (O2)-dependent H2-oxidation, even though Western immunoanalyses showed that the hydrogenase large subunit was present although in amounts less than in w.t. Only one of the mutants (a hypB mutant), grown in nickel-enriched media, showed meaningful restoration of the H2-oxidizing ability. From the above observations it is concluded that (a) the six-ORF region is transcriptionally active and involved in H2-oxidation, (b) the product of hypB is needed for nickel activation of hydrogenase, and (c) the six ORFs (genes) belong to two or more operons. Possible roles of the gene products for the assembly, modification, and processing of hydrogenase from its apoproteins and metal centers are discussed.


Assuntos
Azotobacter vinelandii/genética , Genes Bacterianos/fisiologia , Hidrogênio/metabolismo , Fases de Leitura Aberta/fisiologia , Azotobacter vinelandii/metabolismo , Genes Bacterianos/genética , Hidrogenase/efeitos dos fármacos , Hidrogenase/genética , Hidrogenase/metabolismo , Mutação , Níquel/farmacologia , Fases de Leitura Aberta/genética , Oxirredução/efeitos dos fármacos
9.
Cancer ; 74(7 Suppl): 2204-7, 1994 Oct 01.
Artigo em Inglês | MEDLINE | ID: mdl-8087793

RESUMO

BACKGROUND: Reimbursement policies under the current health care financing system are chaotic, even for older individuals who might expect some measure of uniformity under federal statues that govern coverage under Medicare. Policy changes at the federal level have increased the complexity and uncertainty of reimbursement for providers and patients. METHODS: The Association of Community Cancer Centers, in conjunction with a number of state medical oncology societies, distributed surveys to medical oncologists in 20 states during 1993. Eight hundred, fifty-six medical oncologists in 282 practices responded with information on their practices and insurance problems. RESULTS: Data illustrate the broad diversity of coverage for cancer treatment and research and its impact on treatment decisions and patient access. The broad spectrum of results from various states indicates significant differences in the implementation of federal policies on key issues, such as access to chemotherapeutic agents for off-label indications and clinical trials. CONCLUSIONS: The data portray the significant influence of insurance company policies on clinical research and disease prevention and treatment. Under the current system, prevention measures and prevention trials are discouraged, and a growing number of insurers are not paying for clinical research. New state and federal legislation offers some hope that uniformity of access to providers, prevention, off-label drugs, and clinical trials may be on the horizon.


Assuntos
Política de Saúde , Reembolso de Seguro de Saúde , Neoplasias/terapia , Pesquisa , Ensaios Clínicos como Assunto , Custos e Análise de Custo , Humanos , Revisão da Utilização de Seguros , Reembolso de Seguro de Saúde/economia , Programas de Assistência Gerenciada/economia , Oncologia/economia , Oncologia/organização & administração , Medicare/economia , Neoplasias/prevenção & controle , Administração da Prática Médica/economia , Estados Unidos
10.
Biochemistry ; 32(18): 4813-9, 1993 May 11.
Artigo em Inglês | MEDLINE | ID: mdl-8490025

RESUMO

The nature of the iron-sulfur clusters in oxidized and reduced forms of Fe-only hydrogenases from Desulfovibrio vulgaris, Thermotoga maritima, and Clostridium pasteurianum has been investigated by resonance Raman spectroscopy. The results indicate the presence of ferredoxin-like [4Fe-4S]2+,+ and [2Fe-2S]2+,+ clusters in both T. maritima hydrogenase and C. pasteurianum hydrogenase I, but only [4Fe-4S]2+,+ clusters in D. vulgaris hydrogenase. This necessitates a reevaluation of the iron-sulfur cluster composition of C. pasteurianum hydrogenase I and indicates that the resonance Raman bands in the oxidized hydrogenase that were previously attributed to the hydrogen activating center [Macor, K. A., Czernuszewicz, R. S., Adams, M. W. W., & Spiro, T. G. (1987) J. Biol. Chem. 262, 9945-9947] arise from an indigenous [2Fe-2S]2+ cluster. No resonance Raman bands that could be uniquely attributed to the oxidized or reduced hydrogen activating center were observed. This suggests that the hydrogen activating center is a novel Fe center that is unrelated to any known type of Fe-S cluster.


Assuntos
Clostridium/enzimologia , Desulfovibrio vulgaris/enzimologia , Bactérias Anaeróbias Gram-Negativas/enzimologia , Hidrogenase/química , Proteínas Ferro-Enxofre/química , Hidrogenase/classificação , Ferro/química , Proteínas Ferro-Enxofre/classificação , Análise Espectral Raman , Enxofre/química
11.
Proc Natl Acad Sci U S A ; 90(3): 1078-82, 1993 Feb 01.
Artigo em Inglês | MEDLINE | ID: mdl-8430077

RESUMO

Nitrogenase (EC 1.18.6.1) catalyzes the conversion of dinitrogen to ammonia, the central reaction of biological nitrogen fixation. X-ray anomalous diffraction data were analyzed to probe the structures of the metal clusters bound by nitrogenase MoFe protein. In addition to one FeMo cofactor, each half-molecule of MoFe protein binds one large FeS cluster of a type not previously observed in a protein. The FeS cluster contains roughly eight Fe atoms, comprises two subclusters, and is separated from the FeMo cofactor by an edge-to-edge distance of 14 A. The inorganic framework of the FeMo cofactor is not resolved into subclusters, but the Mo atom is located at its periphery. FeMo cofactors in different half-molecules are 70 A apart and cannot promote binuclear activation of dinitrogen by two Mo atoms.


Assuntos
Clostridium/enzimologia , Molibdoferredoxina/química , Ferro/química , Molibdênio/química , Conformação Proteica , Espalhamento de Radiação , Enxofre/química , Difração de Raios X/métodos
12.
Protein Sci ; 2(1): 93-102, 1993 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-8443593

RESUMO

MgATP-binding and hydrolysis are an integral part of the nitrogenase catalytic mechanism. We are exploring the function of MgATP hydrolysis in this reaction by analyzing the properties of the Fe protein (FeP) component of Azotobacter vinelandii nitrogenase altered by site-directed mutagenesis. We have previously (Seefeldt, L.C., Morgan, T.V., Dean, D.R., & Mortenson, L.E., 1992, J. Biol. Chem. 267, 6680-6688) identified a region near the N-terminus of FeP that is involved in interaction with MgATP. This region of FeP is homologous to the well-known nucleotide-binding motif GXXXXGKS/T. In the present work, we examined the function of the four hydroxyl-containing amino acids immediately C-terminal to the conserved lysine 15 that is involved in interaction with the gamma-phosphate of MgATP. We have established, by altering independently Thr 17, Thr 18, and Thr 19 to alanine, that a hydroxyl-containing residue is not needed at these positions for FeP to function. In contrast, an hydroxyl-containing amino acid at position 16 was found to be critical for FeP function. When the strictly conserved Ser 16 was altered to Ala, Cys, Asp, or Gly, the FeP did not support N2 fixation when expressed in place of the wild-type FeP in A. vinelandii. Altering Ser 16 to Thr (S16T), however, resulted in the expression of an FeP that was partially active. This S16T FeP was purified to homogeneity, and its biochemical examination allowed us to assign a catalytic function to this hydroxyl group in the nitrogenase mechanism. Of particular importance was the finding that the S16T FeP had a significantly higher affinity for MgATP than the wild-type FeP, with a measured Km of 20 microM compared to the wild-type FeP Km of 220 microM. This increased kinetic affinity for MgATP was reflected in a significantly stronger binding of the S16T FeP for MgATP. In contrast, the affinity for MgADP, which binds at the same site as MgATP, was unchanged. The catalytic efficiency (kcat/Km) of S16T FeP was found to be 5.3-fold higher than for the wild-type FeP, with the S16T FeP supporting up to 10 times greater nitrogenase activity at low MgATP concentrations. This indicates a role for the hydroxyl group at position 16 in interaction with MgATP but not MgADP. The site of interaction of this residue was further defined by examining the properties of wild-type and S16T FePs in utilizing MnATP compared with MgATP.(ABSTRACT TRUNCATED AT 400 WORDS)


Assuntos
Trifosfato de Adenosina/metabolismo , Nitrogenase/metabolismo , Difosfato de Adenosina/metabolismo , Sequência de Aminoácidos , Azotobacter vinelandii/enzimologia , Azotobacter vinelandii/genética , Sequência de Bases , Sítios de Ligação , DNA/genética , Hidrólise , Magnésio/metabolismo , Manganês/metabolismo , Dados de Sequência Molecular , Mutagênese Sítio-Dirigida , Nitrogenase/química , Nitrogenase/genética
14.
FEBS Lett ; 309(3): 371-5, 1992 Sep 14.
Artigo em Inglês | MEDLINE | ID: mdl-1516712

RESUMO

The NiFe hydrogenase from Azotobacter vinelandii is a membrane-bound alpha beta heterodimer that can oxidize H2 to protons and electrons and thereby provide energy. Genes encoding the alpha and beta subunits, hoxG and hoxK respectively, followed by thirteen contiguous accessory genes potentially involved in H2 oxidation, have been previously sequenced. Mutations in some of these accessory genes give rise to inactive enzyme containing an alpha subunit with decreased electrophoretic mobility. Mass spectral analysis of the subunits demonstrated that the alpha subunit had a molecular weight 1,663 Da less than that predicted from hoxG. Since the N-terminal sequence of the purified alpha subunit matches the sequence predicted from hoxG we suggest this difference is due to removal of the C-terminus of the alpha subunit which may be an important step linked to metal insertion, localization, and formation of active hydrogenase.


Assuntos
Azotobacter vinelandii/enzimologia , Hidrogenase/metabolismo , Processamento de Proteína Pós-Traducional , Sequência de Aminoácidos , Ativação Enzimática , Espectrometria de Massas , Dados de Sequência Molecular
15.
J Bacteriol ; 174(14): 4549-57, 1992 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-1624446

RESUMO

Azotobacter vinelandii contains a heterodimeric, membrane-bound [NiFe]hydrogenase capable of catalyzing the reversible oxidation of H2. The beta and alpha subunits of the enzyme are encoded by the structural genes hoxK and hoxG, respectively, which appear to form part of an operon that contains at least one further potential gene (open reading frame 3 [ORF3]). In this study, determination of the nucleotide sequence of a region of 2,344 bp downstream of ORF3 revealed four additional closely spaced or overlapping ORFs. These ORFs, ORF4 through ORF7, potentially encode polypeptides with predicted masses of 22.8, 11.4, 16.3, and 31 kDa, respectively. Mutagenesis of the chromosome of A. vinelandii in the area sequenced was carried out by introduction of antibiotic resistance gene cassettes. Disruption of hoxK and hoxG by a kanamycin resistance gene abolished whole-cell hydrogenase activity coupled to O2 and led to loss of the hydrogenase alpha subunit. Insertional mutagenesis of ORF3 through ORF7 with a promoterless lacZ-Kmr cassette established that the region is transcriptionally active and involved in H2 oxidation. We propose to call ORF3 through ORF7 hoxZ, hoxM, hoxL, hoxO, and hoxQ, respectively. The predicted hox gene products resemble those encoded by genes from hydrogenase-related operons in other bacteria, including Escherichia coli and Alcaligenes eutrophus.


Assuntos
Azotobacter vinelandii/genética , Hidrogênio/metabolismo , Hidrogenase/genética , Sequência de Aminoácidos , Azotobacter vinelandii/enzimologia , Sequência de Bases , Clonagem Molecular , Metaloproteínas/genética , Dados de Sequência Molecular , Família Multigênica/genética , Mutagênese Insercional , Oxirredução , Fases de Leitura , Homologia de Sequência do Ácido Nucleico
16.
Biochim Biophys Acta ; 1131(2): 199-202, 1992 Jun 15.
Artigo em Inglês | MEDLINE | ID: mdl-1610901

RESUMO

We reported earlier the identification of two Azotobacter vinelandii open reading frames (ORFs), ORF1 and ORF2, downstream from the hydrogenase structural genes (Chen, J.C. and Mortenson, L.E. (1992) Biochim. Biophys. Acta 1131, 122-124). Sequencing of 6008 base pairs of DNA immediately downstream from ORF2 revealed six additional ORFs (ORF3 through ORF8). All six ORFs are transcribed from the same DNA strand as that of the ORF1 and ORF2. Deduced amino acid sequences of ORF3 through ORF5, and those of ORF4, ORF5, ORF7 and ORF8 have strong homology with genes required for dihydrogen (H2) metabolism in Rhodobacter capsulatus and in Escherichia coli, respectively. ORF4, ORF5, ORF6 and ORF8 would encode for polypeptides containing one or more 'Cys-X-X-Cys' motifs. The predicted products of ORF5 and ORF6 each contain a histidine-rich region, and the product of ORF5 also includes a 'Cys-Thr-Val-Cys-Gly-Cys' region near its amino-terminus. Implications of these findings with respect to metal binding, transport and incorporation, to hydrogenase assembly and to H2 metabolism are discussed.


Assuntos
Azotobacter vinelandii/genética , Genoma Bacteriano , Hidrogênio/metabolismo , Sequência de Aminoácidos , Azotobacter vinelandii/metabolismo , Sequência de Bases , DNA Bacteriano , Hidrogênio/química , Dados de Sequência Molecular , Fases de Leitura Aberta , Homologia de Sequência do Ácido Nucleico
17.
Biochim Biophys Acta ; 1131(1): 122-4, 1992 May 07.
Artigo em Inglês | MEDLINE | ID: mdl-1581355

RESUMO

Sequencing of 744 base pairs (bp) of a cloned section of DNA from Azotobacter vinelandii reveals two complete, closely-spaced open reading frames (ORF1 and ORF2). Both ORFs are transcribed from the same DNA strand as that of the structural genes for hydrogenase (hoxK and hoxG, Menon, A.L. et al. (1990) Gene 96, 67-74), and are located downstream from the latter genes. The distance between the end of hoxG and the beginning of ORF1 is approx. 3.0 kilobases (kb). Most of the deduced amino acid sequence of ORF1 shares high homology with rubredoxin sequences. Some of the deduced amino acid sequence of ORF2 shares homology with that of a reported partial ORF from Rhodobacter capsulatus, ORF located within a region of DNA required for dihydrogen oxidation in that organism. Implications of these findings with respect to dihydrogen metabolism are discussed.


Assuntos
Azotobacter vinelandii/genética , Genes Bacterianos , Genes , Fases de Leitura Aberta , Rubredoxinas/genética , Sequência de Aminoácidos , Sequência de Bases , Hidrogenase/química , Hidrogenase/genética , Dados de Sequência Molecular , Rubredoxinas/química , Homologia de Sequência do Ácido Nucleico
18.
J Biol Chem ; 267(10): 6680-8, 1992 Apr 05.
Artigo em Inglês | MEDLINE | ID: mdl-1313018

RESUMO

Nitrogenase binds and hydrolyzes 2MgATP yielding 2MgADP and 2Pi for each electron that is transferred from the iron protein to the MoFe protein. The iron protein alone binds but does not hydrolyze 2MgATP or 2MgADP and the binding of these nucleotides is competitive. Iron protein amino acid sequences all contain a putatitive mononucleotide-binding region similar to a region found in other mononucleotide-binding proteins. To examine the role of this region in MgATP interaction, we have substituted glutamine and proline for conserved lysine 15. The amino acid substitutions, K15Q and K15P, both yielded a non-N2-fixing phenotype when the genes coding for them were substituted into the Azotobacter vinelandii chromosome in place of the wild-type gene. The iron protein from the K15Q mutant was purified to homogeneity, whereas the protein from the K15P mutant could not be purified in its native form. Unlike wild-type iron protein, the purified K15Q iron protein showed no acetylene reduction, H2 evolution, or ATP hydrolysis activities when complemented with wild-type MoFe protein. The K15Q iron protein and the normal iron protein had a similar total iron content and both proteins showed the characteristic rhombic EPR signal resulting from the reduced state of the single 4Fe-4S cluster bridging the two subunits. Unlike the wild-type iron protein, addition of MgATP to the K15Q iron protein did not result in the perturbation necessary to change the EPR signal of its 4Fe-4S center from a rhombic to an axial line shape. Also unlike the wild-type iron protein, addition of MgATP to K15Q iron protein in the presence of the iron chelator, alpha,alpha'-dipyridyl, did not result in a time-dependent transfer of iron to the chelator. Thus, even though the K15Q iron protein contains a normal 4Fe-4S center, it does not respond to MgATP like the wild-type protein. Examination of the ability of the K15Q iron protein to bind MgADP showed no change from the wild-type iron protein, but its ability to bind MgATP decreased to 35% of the wild-type protein. Thus, in A. vinelandii iron protein, lysine 15 is not needed for interaction with MgADP but is involved in the binding of ATP, presumably through charge-charge interaction with the gamma-phosphate. Based on the above data, this lysine appears to be essential for the MgATP induced conformational change of wild-type iron protein that is required for activity.(ABSTRACT TRUNCATED AT 400 WORDS)


Assuntos
Difosfato de Adenosina/metabolismo , Trifosfato de Adenosina/metabolismo , Azotobacter vinelandii/enzimologia , Proteínas de Bactérias/metabolismo , Lisina/metabolismo , Metaloproteínas/metabolismo , Nitrogenase/metabolismo , Sequência de Aminoácidos , Proteínas de Bactérias/genética , Sequência de Bases , Western Blotting , Reagentes de Ligações Cruzadas , Espectroscopia de Ressonância de Spin Eletrônica , Eletroforese em Gel de Poliacrilamida , Cinética , Metaloproteínas/genética , Dados de Sequência Molecular , Mutagênese Sítio-Dirigida , Ferroproteínas não Heme , Plasmídeos
19.
Biochemistry ; 31(11): 2947-55, 1992 Mar 24.
Artigo em Inglês | MEDLINE | ID: mdl-1312859

RESUMO

The effects of nitric oxide (NO) on the individual components of Azotobacter vinelandii nitrogenase have been examined by kinetic and spectroscopic methods. Incubation of the Fe protein (Av2) for 1 h with stoichiometries of 4- and 8-fold molar excesses of NO to Av2 dimer resulted in a complete loss of activity of Av2 in C2H2-reduction assays. The kinetics of inactivation indicated that the minimum stoichiometry of NO to Av2 required to fully inactivate Av2 lies between 1 and 2. The rate of inactivation of Av2 activity by NO was stimulated up to 2-fold by the presence of MgATP and MgADP but was unaffected by the presence of sodium dithionite. Unexpectedly, complete inactivation of Av2 by low ratios of NO to Av2 also resulted in a complete loss of its ability to bind MgATP and MgADP. UV-visible spectroscopy indicated that the effect of NO on Av2 involves oxidation of the [4Fe-4S] center. EPR spectroscopy revealed that the loss of activity during inactivation of Av2 by NO correlated with the loss of the S = 1/2 and S = 3/2 signals. Appearance of the classical and intense iron-nitrosyl signal (g = 20.3) was only observed when Av2 was incubated with large molar excesses of NO and the appearance of this signal did not correlate with the loss of Av2 activity. The effects of NO on the MoFe protein (Av1) were more complex than for Av2. A time-dependent inactivation of Av1 activity (C2H2 reduction) was observed which required considerably higher concentrations of NO than those required to inactivate Av2 (up to 10 kPa).(ABSTRACT TRUNCATED AT 250 WORDS)


Assuntos
Azotobacter vinelandii/enzimologia , Óxido Nítrico/farmacologia , Nitrogenase/antagonistas & inibidores , Difosfato de Adenosina/farmacologia , Trifosfato de Adenosina/farmacologia , Espectroscopia de Ressonância de Spin Eletrônica , Ferro/metabolismo , Cinética , Substâncias Macromoleculares , Nitrogenase/metabolismo , Espectrofotometria
20.
FEBS Lett ; 284(2): 165-8, 1991 Jun 24.
Artigo em Inglês | MEDLINE | ID: mdl-2060636

RESUMO

Resonance Raman spectroscopy has been used to investigate the Fe-S stretching modes of the [4Fe-4S]2+ cluster in the oxidized iron protein of Clostridium pasteurianum nitrogenase. The results are consistent with a cubane [4Fe-4S] cluster having effective Td symmetry with cysteinyl coordination for each iron. In accord with previous optical and EPR studies [(1984) Biochemistry 23, 2118-2122], treatment with the iron chelator alpha, alpha'-dipyridyl in the presence of MgATP is shown to effect cluster conversion to a [2Fe-2S]2+ cluster. Resonance Raman data also indicate that partial conversion to a [2Fe-2S]2+ cluster is induced by thionine-oxidation in the presence of MgATP in the absence of an iron chelator. This result suggests new explanations for the dramatic change in the CD spectrum that accompanies MgATP-binding to the oxidized Fe protein and the anomalous resonance Raman spectra of thionine-oxidized Clostridium pasteurianum bidirectional hydrogenase.


Assuntos
Proteínas Ferro-Enxofre/química , Nitrogenase/química , Análise Espectral Raman , 2,2'-Dipiridil/farmacologia , Trifosfato de Adenosina/farmacologia , Dicroísmo Circular , Clostridium/enzimologia
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