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1.
J Appl Microbiol ; 131(5): 2336-2350, 2021 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-33893697

RESUMO

AIMS: The complex mycobiota that colonizes traditional fermented sausages plays an important role in the organoleptic properties of such products. The aim of the present study was to investigate fungal diversity and mycotoxin production during maturation of PGI Salame Piemonte. METHODS AND RESULTS: Casing and meat samples were collected at five sampling times from three different batches produced in the same factory and analysed using culture-dependent and independent approaches. Penicillium nalgiovense, which was deliberately inoculated, and Debaryomyces hansenii were the most dominant taxa in casings. Several other fungi mainly belonging to Penicillium crustosum, Penicillium glabrum, Penicillium nordicum, Cladosporium spp., Candida sake, Candida zeylanoides and Yarrowia divulgata were also identified. The casing mycobiota was compared to that of the meat using a metataxonomic approach and a higher fungal diversity was observed in meat as compared to casings. Mycotoxins and penicillin G were monitored using QTOF LC-MS and only trace amounts of roquefortine C were detected in two batches. CONCLUSIONS: The present study highlighted the diversity of Salame Piemonte mycobiota and the important contribution of autochthonous fungi to its diversity. The absence of mycotoxins and penicillin G confirmed the high hygienic quality of the studied product regarding fungal and mycotoxin contamination. SIGNIFICANCE AND IMPACT OF THE STUDY: For the first time, this study provides insights about Salame Piemonte mycobiota, which together with the bacterial microbiota and Salame Piemonte process specifications, are responsible for the product organoleptic properties.


Assuntos
Produtos da Carne , Micotoxinas , Penicillium , Candida , Fermentação , Microbiologia de Alimentos , Saccharomycetales
2.
J Appl Microbiol ; 126(4): 1023-1031, 2019 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-30586216

RESUMO

AIMS: The aim of this study was to investigate the diversity of bacteria with antimicrobial activity present in the coelomic fluid and haemolymph of wild and healthy echinodermata and mollusca. METHODS AND RESULTS: Collection expeditions of healthy marine molluscs and echinoderms were conducted in the Glenan archipelago in spring 2014. Members of the culturable microbiota present in the haemolymph, (haemo-microbiota) of Haliotis tuberculata (gastropoda, abalone) and Mytilus edulis (bivalvia, mussel), as well as in the coelomic fluid (coelo-microbiota) of Echinus esculentus (echinoidea, sea urchin) and Holothuria forskali (Holothuroidea, holothurian) were screened for antimicrobial activity, and further identified using 16S rRNA sequencing. Except for E. esculentus, culturable bacteria in the internal fluids of all studied organisms (mussel, abalone and holothurian) were more abundant than in seawater. The haemo- and coelo-microbiota with antimicrobial activity differed significantly between host species, in terms of abundance and diversity. Indeed, higher numbers were isolated from mussel than from abalone haemolymph. Moreover, in mussels and holothurians, bacteria with antimicrobial activities were predominantly Vibrio spp. (respectively 55 and 45%), while Pseudoalteromonas spp. were the most abundant (50%) in abalone haemolymph. Nevertheless, the activity spectra of these bacteria mainly included marine pathogens affiliated to the Vibrio genus. CONCLUSION: The haemo- and coelo-microbiota with antimicrobial activities were significantly related to their host species and differed in terms of abundance and diversity. These bacteria may play a key role in host homeostasis against pathogens. SIGNIFICANCE AND IMPACT OF THE STUDY: This study brings new knowledge on the diversity of bacteria present in the internal fluids of two marine molluscs and two echinoderms and their antimicrobial activities towards marine pathogens.


Assuntos
Antibiose/fisiologia , Equinodermos/microbiologia , Microbiota/fisiologia , Moluscos/microbiologia , Animais , Anti-Infecciosos/metabolismo , Bactérias/classificação , Bactérias/genética , Bactérias/isolamento & purificação , Biodiversidade , Especificidade de Hospedeiro , RNA Ribossômico 16S/genética , Água do Mar/microbiologia , Vibrio/fisiologia
3.
Food Microbiol ; 45(Pt A): 126-34, 2015 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-25481069

RESUMO

Filamentous fungi may cause food and feed spoilage and produce harmful metabolites to human and animal health such as mycotoxins. Identification of fungi using conventional phenotypic methods is time-consuming and molecular methods are still quite expensive and require specific laboratory skills. In the last two decades, it has been shown that Fourier transform infrared (FTIR) spectroscopy was an efficient tool for microorganism identification. The aims of this study were to use a simple protocol for the identification of filamentous fungi using FTIR spectroscopy coupled with a partial least squares discriminant analysis (PLS-DA), to implement a procedure to validate the obtained results, and to assess the transferability of the method and database. FTIR spectra of 486 strains (43 genera and 140 species) were recorded. An IR spectral database built with 288 strains was used to identify 105 different strains. It was found that 99.17% and 92.3% of spectra derived from these strains were correctly assigned at the genus and species levels, respectively. The establishment of a score and a threshold permitted to validate 80.79% of the results obtained. A standardization function (SF) was also implemented and tested on FTIR data from another instrument on a different site and permitted to increase the percentage of well predicted spectra for this set from 72.15% to 89.13%. This study confirms the good performance of high throughput FTIR spectroscopy for fungal identification using a spectral library of molds of industrial relevance.


Assuntos
Bases de Dados Factuais , Microbiologia de Alimentos , Fungos/isolamento & purificação , Espectroscopia de Infravermelho com Transformada de Fourier/métodos , Análise Discriminante , Fungos/classificação , Análise dos Mínimos Quadrados
4.
Food Microbiol ; 41: 82-90, 2014 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-24750816

RESUMO

As major contributors of the ripening process, yeasts and filamentous fungi play a fundamental role in cheese-making. Still, there is no rapid and affordable identification method available for both yeasts and filamentous fungi encountered in cheeses. In the present study, we developed a method based on CE-SSCP analysis of nuclear ribosomal DNA ITS amplicons, along with a species pattern database comprising 37 fungal species. By combining analyses of the ITS1 and ITS2 conformers, 25 out of 37 species were discriminated using CE-SSCP analysis. This reproducible and sensitive method was applied to determine the fungal community composition of 36 cheeses including blue-veined, pressed-cooked, pressed-uncooked, red-smear and surface-mould ripened cheeses. Overall, each cheese contained between 1 and 6 fungal species and 23 different species of fungi were detected including 8 yeast species, 9 filamentous species and 6 unidentified species. Comparison of the fungal diversity obtained after cloning and sequencing (rDNA ITS) versus CE-SSCP for 8 cheeses showed that CE-SSCP was at least as exhaustive as cloning and sequencing of thirty clones per cheese. In conclusion, this CE-SSCP method was an effective tool to identify the fungi present in various cheese varieties and may be of interest for the cheese industry to rapidly describe the composition of cheese fungal communities.


Assuntos
Queijo/microbiologia , Eletroforese Capilar/métodos , Fungos/genética , Fungos/isolamento & purificação , Técnicas de Tipagem Micológica/métodos , Polimorfismo Conformacional de Fita Simples , Fungos/classificação , Dados de Sequência Molecular , Filogenia
5.
Int J Food Microbiol ; 168-169: 32-41, 2014 Jan 03.
Artigo em Inglês | MEDLINE | ID: mdl-24231128

RESUMO

Routine identification of fungi based on phenotypic and genotypic methods can be fastidious and time-consuming. In this context, there is a constant need for new approaches allowing the rapid identification of molds. Fourier-transform infrared (FTIR) spectroscopy appears as such an indicated method. The objective of this work was to evaluate the potential of FTIR spectroscopy for an early differentiation and identification of filamentous fungi. One hundred and thirty-one strains identified using DNA sequencing, were analyzed using FTIR spectroscopy of the mycelia obtained after a reduced culture time of 48 h compared to current conventional methods. Partial least square discriminant analysis was used as a chemometric method to analyze the spectral data and for identification of the fungal strains from the phylum to the species level. Calibration models were constructed using 106 strains pertaining to 14 different genera and 32 species and were used to identify 25 fungal strains in a blind manner. Identification levels of 98.97% and 98.77% achieved were correctly assigned to the genus and species levels respectively. FTIR spectroscopy with its high discriminating power and rapidity therefore shows strong promise for routine fungal identification. Upgrading of our database is ongoing to test the technique's robustness.


Assuntos
Fungos/química , Fungos/classificação , Micélio/química , Técnicas de Tipagem Micológica/métodos , Espectroscopia de Infravermelho com Transformada de Fourier , Análise Discriminante , Fungos/genética , Reprodutibilidade dos Testes
6.
Appl Microbiol Biotechnol ; 97(9): 4199-211, 2013 May.
Artigo em Inglês | MEDLINE | ID: mdl-22729231

RESUMO

The kinetics of polycyclic aromatic hydrocarbons (PAH) elimination from a contaminated sludge were determined in bioreactors under different conditions: continuously oxic, anoxic, and anoxic/oxic oscillations. The dynamics of metabolically active bacterial communities and their involvement in PAH degradation were followed by T-RFLP targeting 16S rRNA and ring hydroxylating dioxygenase (RHD) transcripts, respectively. PAH degradation was related to toxicity elimination using an aryl hydrocarbon receptor-responsive reporter cell line. Oxygen supply was identified as the main factor affecting the structure of bacterial communities and PAH removal. PAH-degrading bacterial communities were stable throughout the experiment in all conditions according to the presence of RHD transcripts, indicating that bacterial communities were well adapted to the presence of pollutants. Oxic and anoxic/oxic oscillating conditions showed similar levels of PAH removal at the end of the experiment despite several anoxic periods in oscillating conditions. These results highlight the role of dioxygenase activity after oxygen addition. Nevertheless, the higher toxicity elimination observed under oxic conditions suggests that some metabolites or other unidentified active compounds persisted under oscillating and anoxic conditions. Our results emphasize the importance of using complementary biological, chemical and toxicological approaches to implement efficient bioremediation strategies.


Assuntos
Bactérias/metabolismo , Hidrocarbonetos Policíclicos Aromáticos/metabolismo , Esgotos/microbiologia , Bactérias/genética , Biodegradação Ambiental
7.
Int J Food Microbiol ; 155(3): 185-90, 2012 Apr 16.
Artigo em Inglês | MEDLINE | ID: mdl-22364725

RESUMO

Antifungal lactic acid bacteria (ALAB) biodiversity was evaluated in raw milk from ewe, cow and goat over one year period. Lactic acid bacteria were enumerated using 8 semi-selective media, and systematically screened for their antifungal activity against 4 spoilage fungi commonly encountered in dairy products. Depending on the selective medium, between 0.05% (Elliker agar) and 5.5% (LAMVAB agar) screened colonies showed an antifungal activity. The great majority of these active colonies originated from cow (49%) and goat (43%) milks, whereas only 8% were isolated from ewe milk. Penicillium expansum was the most frequently inhibited fungus with 48.5% of colonies active against P. expansum among the 1235 isolated, followed by Mucor plumbeus with 30.6% of active colonies, Kluyveromyces lactis with only 12.1% of active colonies and Pichia anomala with 8.7% of active colonies. In the tested conditions, 94% of the sequenced active colonies belonged to Lactobacillus. Among them, targeted fungal species differed according to the Lactobacillus group, whose presence largely depended on year period and milk origin. The Lb. casei and Lb. reuteri groups, predominantly recovered in summer/fall, were overrepresented in the population targeting M. plumbeus, whereas isolates from the Lb. plantarum group, predominantly recovered in spring, were overrepresented in the population targeting K. lactis, the ones belonging to the Lb. buchneri group, predominantly recovered in spring, were overrepresented in the population targeting P. anomala. Raw milk, especially cow and goat milks from the summer/fall period appeared to be a productive reservoir for antifungal lactobacilli.


Assuntos
Biodiversidade , Lactobacillus/classificação , Leite/microbiologia , Animais , Antibiose , Bovinos , Contagem de Colônia Microbiana , Feminino , Fungos/classificação , Fungos/isolamento & purificação , Cabras , Kluyveromyces/classificação , Kluyveromyces/isolamento & purificação , Ácido Láctico , Lactobacillus/isolamento & purificação , Estações do Ano , Ovinos
8.
Lett Appl Microbiol ; 51(1): 18-23, 2010 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-20477955

RESUMO

AIMS: To evaluate and optimize the use of denaturing high-performance liquid chromatography (DHPLC) for yeasts identification in red smear cheese surfaces. METHODS AND RESULTS: The resolution of DHPLC was first evaluated and optimized using a mixture of PCR amplicons of the internal transcribed spacer 2 (ITS2) region of 19 yeast reference strains representing 18 species that are common in the cheese microbiota. Sixteen of the 18 yeast species could be resolved by combining runs at temperatures of 57.5 and 59 degrees C. Then, DHPLC was used to investigate the yeast microbiota of pasteurized Maroilles, Munster and Livarot cheese surfaces by comparing their peak profiles with our reference yeast database and by collecting/sequencing of peak fractions. Debaryomyces hansenii and Geotrichum candidum for Munster and Maroilles cheeses, and Candida catenulata, Candida intermedia and G. candidum for Livarot cheese were identified using the reference database and collecting/sequencing of peak fractions. CONCLUSIONS: DHPLC technique was found to have good resolution properties and to be useful for investigating the yeast microbiota of red smear cheese surfaces. SIGNIFICANCE AND IMPACT OF THE STUDY: This is the first time that DHPLC is applied to study the yeast microbiota of red smear cheese surfaces.


Assuntos
Queijo/microbiologia , Cromatografia Líquida de Alta Pressão/métodos , DNA Fúngico/genética , DNA Fúngico/isolamento & purificação , Micologia/métodos , Leveduras/classificação , Leveduras/genética , Biodiversidade , DNA Intergênico/genética , DNA Intergênico/isolamento & purificação , Análise de Sequência de DNA , Leveduras/isolamento & purificação
9.
Int J Food Microbiol ; 138(1-2): 100-7, 2010 Mar 31.
Artigo em Inglês | MEDLINE | ID: mdl-20060187

RESUMO

Real-time PCR has been applied to quantify mycelium of Penicillium camemberti and Penicillium roqueforti during ripening of model cheese curd and surface mould-ripened cheeses. Total fungal DNA was first validated as an indicator of mycelial biomass in pure liquid culture and then in model curds at different stages of ripening. To imitate cheese matrix effects, DNA was extracted from curd mixed with known amounts of fresh mycelium of P. camemberti or P. roqueforti and was used as biomass standards for further quantitative real-time PCR. Mycelial mass per cheese (mg/g) was then directly obtained from fluorescence data. In model cheese curd, mycelial mass of P. camemberti increased from 2.8 at d4 to 596 mg/g at d11 whereas P. roqueforti increased from 0.3 to 6.3 mg/g during the same period. P. camemberti showed a fast development in Coulommiers from d2 to d9 (66 to 119 mg/g) and a 100-fold increase in Carré (0.85 to 85 mg/g). While mycelial biomass reached a maximum at d9 in Coulommiers, it still developed in Carré until d45. For the first time, cheese manufacturers have a powerful technique to monitor mycelial growth dynamics of their fungal cultures, which represents an important step for controlling cheese making.


Assuntos
Queijo/microbiologia , Microbiologia de Alimentos , Microbiologia Industrial , Penicillium/crescimento & desenvolvimento , Reação em Cadeia da Polimerase , Biomassa , Contagem de Colônia Microbiana , DNA Fúngico/análise , Humanos , Penicillium/classificação , Penicillium/isolamento & purificação , Dinâmica Populacional , Crescimento Demográfico
10.
Int J Food Microbiol ; 133(1-2): 31-7, 2009 Jul 31.
Artigo em Inglês | MEDLINE | ID: mdl-19481828

RESUMO

The microbial diversity of the surface of a commercial red-smear cheese, Livarot cheese, sold on the retail market was studied using culture-dependent and independent approaches. Forty yeasts and 40 bacteria from the cheese surface were collected, dereplicated using single-strand conformation polymorphism (SSCP) analysis and identified using rRNA gene sequencing for the culture-dependent approach. The culture-independent approach involved cloning and sequencing of the 16S rRNA gene and SSCP analysis from total DNA extracted from the cheese. The most dominant bacteria were Microbacterium gubbeenense, Leucobacter komagatae and Gram-negative bacteria from the Gamma-Proteobacteria class. Fluorescence in situ hybridization (FISH) analysis was also used to study the cheese microbial diversity with class-level and specific rRNA-targeted probes for bacteria and yeasts, respectively. FISH analysis confirmed that Gamma-Proteobacteria were important microorganisms in this cheese. Four specific FISH probes targeting the dominant yeasts present in the cheese, Candida catenulata, Candida intermedia, Geotrichum spp. and Yarrowia lipolytica, were also designed and evaluated. These probes allowed the detection of these yeasts directly in cheese. The use of the rRNA gene-based approach combined with FISH analysis was useful to investigate the diversity of a surface microbial consortium from cheese.


Assuntos
Bactérias/isolamento & purificação , Queijo/microbiologia , Microbiologia de Alimentos , Leveduras/isolamento & purificação , Bactérias/genética , Sequência de Bases , Biodiversidade , Contagem de Colônia Microbiana , DNA Bacteriano/isolamento & purificação , Fluorescência , Humanos , Filogenia , Polimorfismo Conformacional de Fita Simples , RNA Ribossômico 16S , Leveduras/genética
11.
J Appl Microbiol ; 107(4): 1404-13, 2009 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-19426267

RESUMO

AIMS: To investigate the impact of Proteus vulgaris growth on a multispecies ecosystem and on volatile aroma compound production during cheese ripening. METHODS AND RESULTS: The microbial community dynamics and the production of volatile aroma compounds of a nine-species cheese ecosystem were compared with or without the presence of P. vulgaris in the initial inoculum. Proteus vulgaris was able to colonize the cheese surface and it was one of the dominant species, representing 37% of total isolates at the end of ripening with counts of 9.2 log(10) CFU g(-1). In the presence of P. vulgaris, counts of Arthrobacter arilaitensis, Brevibacterium aurantiacum and Hafnia alvei significantly decreased. Proteus vulgaris influenced the production of total volatile aroma compounds with branched-chain aldehydes and their corresponding alcohols being most abundant. CONCLUSIONS: Proteus vulgaris was able to successfully implant itself in a complex cheese ecosystem and significantly contributed to the organoleptic properties of cheese during ripening. This bacterium also interacted negatively with other bacteria in the ecosystem studied. SIGNIFICANCE AND IMPACT OF THE STUDY: This is the first time that the impact of a Gram-negative bacterium on cheese microbial ecology and functionality has been described.


Assuntos
Bactérias/crescimento & desenvolvimento , Queijo/análise , Queijo/microbiologia , Compostos Orgânicos/análise , Proteus vulgaris/crescimento & desenvolvimento , Compostos de Enxofre/análise , Leveduras/crescimento & desenvolvimento , Animais , Bactérias/isolamento & purificação , Contagem de Colônia Microbiana , Cor , Ecossistema , Microbiologia de Alimentos , Cromatografia Gasosa-Espectrometria de Massas , Concentração de Íons de Hidrogênio , Olfato , Volatilização , Leveduras/isolamento & purificação
12.
J Dairy Sci ; 90(5): 2200-10, 2007 May.
Artigo em Inglês | MEDLINE | ID: mdl-17430918

RESUMO

A total of 1,052 bacteria and 828 yeasts were isolated from the surface flora of 6 batches of Gubbeen cheese made in 1996-1997 and 2002-2003. Stability of the microflora was evaluated over time and also during ripening at 4, 10, and 16 d (batches 4, 5, and 6) or at 4, 16, 23, and 37 d (batches 1, 2, and 3). Bacteria were identified using pulsed-field gel electrophoresis, repetitive extragenic palindromic-PCR, and 16S rRNA gene sequencing, and yeasts were identified by Fourier transform infrared spectroscopy. The bacteria included at least 17 species, of which the most common were Staphylococcus saprophyticus (316 isolates), Corynebacterium casei (248 isolates), Brevibacterium aurantiacum (187 isolates), Corynebacterium variabile (146 isolates), Microbacterium gubbeenense (55 isolates), Staphylococcus equorum/cohnii (31 isolates), and Psychrobacter spp. (26 isolates). The most common yeasts were Debaryomyces hansenii (624 isolates), Candida catenulata (135 isolates), and Candida lusitaniae (62 isolates). In all batches of cheese except batch 2, a progression of bacteria was observed, with staphylococci dominating the early stages of ripening and coryneforms the later stages. No progression of yeast was found. Pulsed-field gel electrophoresis showed that several different strains of the 5 important species of bacteria were present, but generally only one predominated. The commercial strains used for smearing the cheese were recovered, but only in very small numbers early in ripening. Four species, B. aurantiacum, C. casei, C. variabile, and Staph. saprophyticus, were found on all batches of cheese, but their relative importance varied considerably. The results imply that significant variation occurs in the surface microflora of cheese.


Assuntos
Bactérias/isolamento & purificação , Biodiversidade , Queijo/microbiologia , Leveduras/isolamento & purificação , Bactérias/classificação , Bactérias/crescimento & desenvolvimento , Queijo/análise , Enzimas de Restrição do DNA/metabolismo , Eletroforese em Gel de Campo Pulsado , Manipulação de Alimentos/métodos , Concentração de Íons de Hidrogênio , RNA Ribossômico 16S/genética , Sais/análise , Fatores de Tempo , Água/análise , Leveduras/classificação , Leveduras/crescimento & desenvolvimento
13.
J Appl Microbiol ; 101(3): 668-81, 2006 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-16907817

RESUMO

AIMS: To determine the relationships between the major organisms from the cheese-making personnel and environment and the surface of a smear cheese. METHODS AND RESULTS: 360 yeast and 593 bacteria from the cheese surface, the dairy environment and the hands and arms of personnel were collected. Pulsed-field gel electrophoresis, repetitive sequence-based polymerase chain reaction and 16S rDNA sequencing were used for typing and identifying the bacteria, and mitochondrial DNA restriction fragment length polymorphism and Fourier-transform infrared spectroscopy for typing and identifying the yeast. The three most dominant bacteria were Corynebacterium casei, Corynebacterium variabile and Staphylococcus saprophyticus, which were divided into three, five and seven clusters, respectively, by macrorestriction analysis. The same clones from these organisms were isolated on the cheese surface, the dairy environment and the skin of the cheese personnel. Debaryomyces hansenii was the most dominant yeast. CONCLUSIONS: A 'house' microflora exists in the cheese plant. Although the original source of the micro-organisms was not identified, the brines were an important source of S. saprophyticus and D. hansenii and, additionally, the arms and hands of the workers the sources of C. casei and C. variabile. SIGNIFICANCE AND IMPACT OF THE STUDY: This is the first time that the major contribution of the house microflora to the ripening of a smear-ripened cheese has been demonstrated.


Assuntos
Queijo/microbiologia , Microbiologia de Alimentos , Biodiversidade , Contagem de Colônia Microbiana/métodos , Corynebacterium/genética , Corynebacterium/isolamento & purificação , DNA Bacteriano/genética , DNA Mitocondrial/genética , DNA Ribossômico/genética , Eletroforese em Gel de Campo Pulsado/métodos , Manipulação de Alimentos/métodos , Indústria Alimentícia , Bactérias Gram-Positivas/genética , Bactérias Gram-Positivas/isolamento & purificação , Humanos , Fenótipo , Polimorfismo de Fragmento de Restrição , Pele/microbiologia , Staphylococcus/genética , Staphylococcus/isolamento & purificação , Local de Trabalho , Leveduras/genética , Leveduras/isolamento & purificação
14.
Lett Appl Microbiol ; 42(4): 425-31, 2006 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-16599999

RESUMO

AIMS: To study the survival of bacteria isolated from the surface of smear cheese and monitor their development during cheese ripening. METHODS AND RESULTS: The storage of five potential bacterial surface-ripening cheese cultures, Brevibacterium aurantiacum, Corynebacterium casei, Corynebacterium variable, Microbacterium gubbeenense and Staphylococcus saprophyticus, in maximum recovery diluent (MRD), containing 0.85% w/v or 5% w/v NaCl, at 21 or 4 degrees C for 40 days, was investigated. All five strains studied survived well with a maximum decrease of c. 2.5 log(10) CFU ml(-1) after storage for 40 days at 4 degrees C in 0.85% or 5% w/v NaCl. Survival, especially of C. variable, was less at 21 degrees C. The development of defined ripening cultures containing C. casei and Debaryomyces hansenii on two farmhouse cheeses was also evaluated. Using pulsed-field gel electrophoresis (PFGE) for the bacteria and mitochondrial DNA restriction fragment length polymorphism (mtDNA-RFLP) for the yeast, it was shown that the ripening cultures could be re-isolated in high numbers, 10(8) CFU cm(-2) for C. casei and 10(6) CFU cm(-2) for D. hansenii, from the cheese surface after 2.5 weeks of ripening. CONCLUSIONS: Ripening strains of surface ripening cultures can be stored in MRD containing 5% w/v salt at 4 degrees C for at least 40 days. Such cultures are recovered in high numbers from the cheese during ripening. SIGNIFICANCE AND IMPACT OF STUDY: This study has provided a low-cost and efficient way to store bacteria that could be used as ripening cultures for smear cheese. Such cultures can be recovered in high numbers from the cheese surface during ripening.


Assuntos
Bactérias/crescimento & desenvolvimento , Queijo/microbiologia , Contagem de Colônia Microbiana , DNA Mitocondrial/genética , Polimorfismo de Fragmento de Restrição , Cloreto de Sódio/farmacologia
16.
Cell Microbiol ; 2(1): 19-33, 2000 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-11207560

RESUMO

Shigella entry into epithelial cells is characterized by a transient reorganization of the host cell cytoskeleton at the site of bacterial interaction with the cell membrane, which leads to bacterial engulfment in a macropinocytic process. Using affinity chromatography on HeLa cell extracts, we show here that the hyaluronan receptor CD44 associates with IpaB, a Shigella protein that is secreted upon cell contact. Overlay and solid-phase assays indicated that IpaB binds directly to the extracellular domain of CD44; binding is saturable and inhibitable, with a half-maximal inhibitory concentration of 175 nM. Immunoprecipitation experiments showed that IpaB associates with CD44 during Shigella entry. CD44 is recruited at bacterial entry sites and localizes at the plasma membrane of cellular extensions induced by Shigella. Pretreatment of cells with an anti-CD44 monoclonal antibody resulted in inhibition of Shigella-induced cytoskeletal reorganization, as well as inhibition of bacterial entry, whereas transfection of CD44 in cells that are deficient for CD44 results in increased bacterial binding to cells and internalization. The IpaB-CD44 interaction appears to be required for Shigella invasion by initiating the early steps of the entry process.


Assuntos
Aderência Bacteriana , Proteínas de Bactérias/metabolismo , Células Epiteliais/microbiologia , Receptores de Hialuronatos/fisiologia , Shigella flexneri/patogenicidade , Anticorpos Monoclonais/imunologia , Cromatografia de Afinidade , Citoesqueleto/metabolismo , Células Epiteliais/metabolismo , Células Epiteliais/ultraestrutura , Imunofluorescência , Células HeLa , Humanos , Receptores de Hialuronatos/genética , Receptores de Hialuronatos/metabolismo , Estrutura Terciária de Proteína , Transfecção
17.
J Cell Sci ; 112 ( Pt 13): 2059-68, 1999 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-10362536

RESUMO

Shigella flexneri is an enteroinvasive bacterium responsible for bacillary dysentery in humans. Bacterial entry into epithelial cells is a crucial step for the establishment of the infection. It is characterized by a transient reorganization of the host cell cytoskeleton at the site of bacterial interaction with the cell membrane, which leads to bacterial engulfment by a macropinocytic process. We show in this study that the membrane-cytoskeleton linker, ezrin, a member of the ERM (ezrin, radixin, moesin) family, plays an active role in the process of Shigella uptake. Ezrin is highly enriched in cellular protrusions induced by the bacterium and is found in close association with the plasma membrane. In addition, Shigella entry is significantly reduced in cells transfected with a dominant negative allele of ezrin with entry foci showing much shorter cellular protrusions. These results indicate that ezrin not only acts as a membrane-cytoskeleton linker, but may also mediate extension of cellular projections in the presence of signals such as those elicited by invading microorganisms.


Assuntos
Fosfoproteínas/fisiologia , Shigella flexneri/patogenicidade , Actinas/metabolismo , Animais , Membrana Celular/microbiologia , Membrana Celular/fisiologia , Membrana Celular/ultraestrutura , Proteínas do Citoesqueleto , Citoesqueleto/microbiologia , Citoesqueleto/fisiologia , Citoesqueleto/ultraestrutura , Disenteria Bacilar/etiologia , Disenteria Bacilar/microbiologia , Células HeLa , Humanos , Células LLC-PK1 , Microscopia Confocal , Microscopia Imunoeletrônica , Modelos Biológicos , Fosfoproteínas/genética , Transdução de Sinais , Suínos , Transfecção , Virulência
18.
J Cell Sci ; 112 ( Pt 13): 2069-80, 1999 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-10362537

RESUMO

Shigella flexneri, an invasive bacterial pathogen, promotes formation of two cytoskeletal structures: the entry focus that mediates bacterial uptake into epithelial cells and the actin-comet tail that enables the bacteria to spread intracellularly. During the entry step, secretion of bacterial invasins causes a massive burst of subcortical actin polymerization leading the formation of localised membrane projections. Fusion of these membrane ruffles leads to bacterial internalization. Inside the cytoplasm, polar expression of the IcsA protein on the bacterial surface allows polymerization of actin filaments and their organization into an actin-comet tail leading to bacterial spread. The Rho family of small GTPases plays an essential role in the organization and regulation of cellular cytoskeletal structures (i.e. filopodia, lamellipodia, adherence plaques and intercellular junctions). We show here that induction of Shigella entry foci is controlled by the Cdc42, Rac and Rho GTPases, but not by RhoG. In contrast, actin-driven intracellular motility of Shigella does not require Rho GTPases. Therefore, Shigella appears to manipulate the epithelial cell cytoskeleton both by Rho GTPase-dependent and -independent processes.


Assuntos
GTP Fosfo-Hidrolases/metabolismo , Proteínas de Ligação ao GTP/metabolismo , Shigella flexneri/enzimologia , Shigella flexneri/patogenicidade , Actinas/metabolismo , Animais , Toxinas Bacterianas/toxicidade , Proteínas de Ciclo Celular/genética , Proteínas de Ciclo Celular/metabolismo , Escherichia coli/patogenicidade , Feminino , GTP Fosfo-Hidrolases/genética , Proteínas de Ligação ao GTP/genética , Proteínas Ativadoras de GTPase , Guanosina 5'-O-(3-Tiotrifosfato)/farmacologia , Células HeLa , Humanos , Técnicas In Vitro , Movimento , Oócitos/microbiologia , Proteínas/genética , Proteínas/metabolismo , Shigella flexneri/fisiologia , Fatores de Transcrição/metabolismo , Transfecção , Xenopus , Proteína cdc42 de Saccharomyces cerevisiae de Ligação ao GTP , Proteínas rho de Ligação ao GTP
19.
J Cell Biol ; 145(4): 689-98, 1999 May 17.
Artigo em Inglês | MEDLINE | ID: mdl-10330399

RESUMO

Bacterial lipopolysaccharide (LPS) at the apical surface of polarized intestinal epithelial cells was previously shown to be transported from the apical to the basolateral pole of the epithelium (Beatty, W.L., and P.J. Sansonetti. 1997. Infect. Immun. 65:4395-4404). The present study was designed to elucidate the transcytotic pathway of LPS and to characterize the endocytic compartments involved in this process. Confocal and electron microscopic analyses revealed that LPS internalized at the apical surface became rapidly distributed within endosomal compartments accessible to basolaterally internalized transferrin. This compartment largely excluded fluid-phase markers added at either pole. Access to the basolateral side of the epithelium subsequent to trafficking to basolateral endosomes occurred via exocytosis into the paracellular space beneath the intercellular tight junctions. LPS appeared to exploit other endocytic routes with much of the internalized LPS recycled to the original apical membrane. In addition, analysis of LPS in association with markers of the endocytic network revealed that some LPS was sent to late endosomal and lysosomal compartments.


Assuntos
Mucosa Intestinal/metabolismo , Lipopolissacarídeos/metabolismo , Shigella flexneri/metabolismo , Biomarcadores , Polaridade Celular , Endossomos/metabolismo , Humanos , Mucosa Intestinal/citologia , Mucosa Intestinal/microbiologia , Lipopolissacarídeos/farmacologia , Lisossomos/metabolismo
20.
Infect Immun ; 66(9): 4484-90, 1998 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-9712804

RESUMO

Shigella flexneri is a triggering agent for reactive arthritis in HLA-B27-susceptible individuals. Considering the intracellular multiplication of bacteria, it seems likely that bacterial peptides may be presented by the major histocompatibility complex (MHC) class I pathway. To examine this hypothesis, we infected HLA-B*2705- and/or human beta2-microglobulin-transfected murine L-cell lines with M90T, an invasive strain of S. flexneri. Bacterial infection induced no detectable modifications in the biosynthesis and expression level of HLA-B27, as assessed by immunoprecipitation, Northern blot analysis, and flow cytometry. Using confocal microscopy, we observed that bacterial infection induced a clustering of HLA-B27 molecules during macropinocytosis and before bacterial dissemination from cell to cell. Peptides naturally bound to HLA-B27 molecules were acid eluted from infected cells and separated by high-performance liquid chromatography. Major differences were observed in high-performance liquid chromatography profiles and in the nature of peptides presented following bacterial infection. Although most of the antigens presented were not accessed by Edman degradation, we obtained two sequences partially homologous to bacterial proteins. These peptides lacked the major HLA-B27 peptide anchor (Arg) at position 2, and one had an unusual length of 14 amino acids. These data suggest that alterations in the peptide presentation by HLA-B27 occur during infection, which could be relevant to the pathogenesis of HLA-B27-related arthritis.


Assuntos
Apresentação de Antígeno/imunologia , Antígeno HLA-B27/imunologia , Shigella flexneri/imunologia , Animais , Antígeno HLA-B27/genética , Antígeno HLA-B27/metabolismo , Humanos , Células L , Camundongos , Peptídeos/imunologia , Transfecção
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