A semantic model for species description applied to the ensign wasps (hymenoptera: evaniidae) of New Caledonia.

Taxonomic descriptions are unparalleled sources of knowledge of life's phenotypic diversity. As natural language prose, these data sets are largely refractory to computation and integration with other sources of phenotypic data. By formalizing taxonomic descriptions using ontology-based semantic representation, we aim to increase the reusability and computability of taxonomists' primary data. Here, we present a revision of the ensign wasp (Hymenoptera: Evaniidae) fauna of New Caledonia using this new model for species description. Descriptive matrices, specimen data, and taxonomic nomenclature are gathered in a unified Web-based application, mx, then exported as both traditional taxonomic treatments and semantic statements using the OWL Web Ontology Language. Character:character-state combinations are then annotated following the entity-quality phenotype model, originally developed to represent mutant model organism phenotype data; concepts of anatomy are drawn from the Hymenoptera Anatomy Ontology and linked to phenotype descriptors from the Phenotypic Quality Ontology. The resulting set of semantic statements is provided in Resource Description Framework format. Applying the model to real data, that is, specimens, taxonomic names, diagnoses, descriptions, and redescriptions, provides us with a foundation to discuss limitations and potential benefits such as automated data integration and reasoner-driven queries. Four species of ensign wasp are now known to occur in New Caledonia: Szepligetella levipetiolata, Szepligetella deercreeki Deans and Mikó sp. nov., Szepligetella irwini Deans and Mikó sp. nov., and the nearly cosmopolitan Evania appendigaster. A fifth species, Szepligetella sericea, including Szepligetella impressa, syn. nov., has not yet been collected in New Caledonia but can be found on islands throughout the Pacific and so is included in the diagnostic key.

Identification, distribution, and adult phenology of the carrion beetles (Coleoptera: Silphidae) of Texas.

The carrion beetles (Coleoptera: Silphidae) of Texas are surveyed. Thirteen of the 14 species, and five of the six genera, of this ecologically and forensically important group of scavengers that have previously been reported from Texas are confirmed here based on a study of 3,732 adult specimens. The one reported, but unconfirmed, species, Oxelytrum discicolle, was probably based on erroneous label data and is excluded from the Texas fauna. Two additional species, Nicrophorus sayi and N. investigator are discussed as possible, but unconfirmed, components of the fauna. Taxonomic diagnoses, Texas distribution range maps, seasonality profiles, and biological notes are presented for each confirmed species. The confirmed Texas silphid fauna of 13 species comprises 43% of the 30 species of this family that are known from America north of Mexico. The highest richness (11 species) is found in the combined Austroriparian and Texan biotic provinces of eastern Texas. Phenologically, three species (Necrophila americana, O. rugulosum and Nicrophorus tomentosus) exhibit bimodal adult temporal occurrence patterns with peaks in the spring and late summer or fall; four species (Oiceoptoma noveboracense, Necrodes surinamensis, Nicrophorus carolinus, and N. orbicollis) exhibit unimodal occurrence patterns with a single peak in late spring or early summer; one species (Oiceoptonia inaequale) exhibits a unimodal occurrence pattern with a single peak in early spring; and five species (Thanatophilus truncatus, Nicrophorus americanus, N. marginatus, N. mexicanus and N. pustulatus) display unimodal occurrence patterns with peaks in late summer or early fall.

A revision of Evaniscus (Hymenoptera, Evaniidae) using ontology-based semantic phenotype annotation.

The Neotropical evaniid genus Evaniscus Szépligeti currently includes six species. Two new species are described, Evaniscus lansdownei Mullins, sp. n. from Colombia and Brazil and Evaniscus rafaeli Kawada, sp. n. from Brazil. Evaniscus sulcigenis Roman, syn. n., is synonymized under Evaniscus rufithorax Enderlein. An identification key to species of Evaniscus is provided. Thirty-five parsimony informative morphological characters are analyzed for six ingroup and four outgroup taxa. A topology resulting in a monophyletic Evaniscus is presented with Evaniscus tibialis and Evaniscus rafaeli as sister to the remaining Evaniscus species. The Hymenoptera Anatomy Ontology and other relevant biomedical ontologies are employed to create semantic phenotype statements in Entity-Quality (EQ) format for species descriptions. This approach is an early effort to formalize species descriptions and to make descriptive data available to other domains.