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1.
J Hazard Mater ; 469: 133881, 2024 May 05.
Artigo em Inglês | MEDLINE | ID: mdl-38422740

RESUMO

Bromine (Br) is widely distributed through the lithosphere and hydrosphere, and its chemistry in the environment is affected by natural processes and anthropogenic activities. While the chemistry of Br in the atmosphere has been comprehensively explored, there has never been an overview of the chemistry of Br in soil and aquatic systems. This review synthesizes current knowledge on the sources, geochemistry, health and environmental threats, remediation approaches, and regulatory guidelines pertaining to Br pollution in terrestrial and aquatic environments. Volcanic eruptions, geothermal streams, and seawater are the major natural sources of Br. In soils and sediments, Br undergoes natural cycling between organic and inorganic forms, with bromination reactions occurring both abiotically and through microbial activity. For organisms, Br is a non-essential element; it is passively taken up by plant roots in the form of the Br- anion. Elevated Br- levels can limit plant growth on coastal soils of arid and semi-arid environments. Br is used in the chemical industry to manufacture pesticides, flame retardants, pharmaceuticals, and other products. Anthropogenic sources of organobromine contaminants in the environment are primarily wastewater treatment, fumigants, and flame retardants. When aqueous Br- reacts with oxidants in water treatment plants, it can generate brominated disinfection by-products (DBPs), and exposure to DBPs is linked to adverse human health effects including increased cancer risk. Br- can be removed from aquatic systems using adsorbents, and amelioration of soils containing excess Br- can be achieved by leaching, adding various amendments, or phytoremediation. Developing cost-effective methods for Br- removal from wastewater would help address the problem of toxic brominated DBPs. Other anthropogenic organobromines, such as polybrominated diphenyl ether (PBDE) flame retardants, are persistent, toxic, and bioaccumulative, posing a challenge in environmental remediation. Future research directives for managing Br pollution sustainably in various environmental settings are suggested here.


Assuntos
Ecossistema , Retardadores de Chama , Humanos , Bromo , Retardadores de Chama/análise , Gestão de Riscos , Solo/química
2.
Environ Sci Technol ; 58(6): 2750-2761, 2024 Feb 13.
Artigo em Inglês | MEDLINE | ID: mdl-38294931

RESUMO

With the increased occurrences of wildfires worldwide, there has been an increase in scientific interest surrounding the chemistry of fire-derived "black" carbon (BC). Traditionally, wildfire research has assumed that condensed aromatic carbon (ConAC) is exclusively produced via combustion, and thus, ConAC is equated to BC. However, the lack of correlations between ConAC in soils or rivers and wildfire history suggests that ConAC may be produced non-pyrogenically. Here, we show quantitative evidence that this occurs during the oxidation of biomass with environmentally ubiquitous hydroxyl radicals. Pine wood boards exposed to iron nails and natural weather conditions for 12 years yielded a charcoal-like ConAC-rich material. ConAC was also produced during laboratory oxidations of pine, maple, and brown-rotted oak woods, as well as algae, corn root, and tree bark. Back-of-the-envelope calculations suggest that biomass oxidation could be producing massive non-pyrogenic ConAC fluxes to terrestrial and aquatic environments. These estimates (e.g., 163-182 Tg-ConAC/year to soils) are much higher than the estimated pyrogenic "BC" fluxes (e.g., 128 Tg-ConAC/year to soils) implying that environmental ConAC is primarily non-pyrogenic. This novel perspective suggests that wildfire research trajectories should shift to assessing non-pyrogenic ConAC sources and fluxes, developing new methods for quantifying true BC, and establishing a new view of ConAC as an intermediate species in the biogeochemical processing of biomass during soil humification, aquatic photochemistry, microbial degradation, or mineral-organic matter interactions. We also advise against using BC or pyrogenic carbon (pyC) terminologies for ConAC measured in environmental matrices, unless a pyrogenic source can be confidently assigned.


Assuntos
Carbono , Incêndios , Biomassa , Carvão Vegetal , Fuligem/análise , Solo
3.
Environ Sci Technol ; 57(8): 3104-3113, 2023 02 28.
Artigo em Inglês | MEDLINE | ID: mdl-36781166

RESUMO

Mining wastes or combustion ash are materials of high carbon sequestration potential but are also known for their toxicity in terms of heavy metal content. To utilize such waste materials for engineered carbon mineralization purposes, there is a need to investigate the fate and mobility of toxic metals. This is a study of the coprecipitation of metals with calcium carbonate for environmental heavy metal mitigation. The study also examines the stability of precipitated phases under environmentally relevant acid conditions. For a wide range of cadmium (Cd) and zinc (Zn) concentrations (10 to 5000 mg/L), induced coprecipitation led to greater than 99% uptake from water. The calcium carbonate phases were found to contain amounts as high as 9.9 wt % (Cd) and 17 wt % (Zn), as determined by novel synchrotron techniques, including X-ray fluorescence element mapping and three-dimensional (3D) nanotransmission X-ray microscopy (TXM). TXM imaging revealed first-of-a-kind observations of chemical gradients and internal nanoporosity within particles. These observations provided new insights into the mechanisms leading to the retention of coprecipitated heavy metals during the dissolution of calcite in acidic (pH 4) solutions. These observations highlight the feasibility of utilizing carbonate coprecipitation as an engineered approach to the durable sequestration of toxic metals.


Assuntos
Metais Pesados , Zinco , Cádmio , Metais Pesados/química , Carbonatos , Carbonato de Cálcio
4.
PLoS One ; 15(4): e0226180, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-32302305

RESUMO

Heavy metal accumulation in edible plants grown in contaminated soils poses a major environmental risk to humans and grazing animals. This study focused on the concentration and speciation of Zn in different edible plants grown in soils contaminated with smelter wastes (Spelter, WV, USA) containing high levels of the metals Zn, Cu, Pb, Cd. Their accumulation was examined in different parts (roots, stem, and leaves) of plants and as a function of growth stage (dry seed, sprouting seed, cotyledon, and leaves) in the root vegetables radish, the leafy vegetable spinach and the legume clover. Although the accumulation of metals varied significantly with plant species, the average metal concentrations were [Zn] > [Pb] > [Cu] > [Cd]. Metal uptake studies were complemented with bulk and micro X-ray absorption spectroscopy (XAS) at Zn K-edge and micro X-ray fluorescence (µXRF) measurements to evaluate the speciation and distribution of Zn in these plant species. Dynamic interplay between the histidine and malate complexation of Zn was observed in all plant species. XRF mapping of spinach leaves at micron spatial resolution demonstrated the accumulation of Zn in vacuoles and leaf tips. Radish root showed accumulation of Zn in root hairs, likely as ZnS nanoparticles. At locations of high Zn concentration in spinach leaves, µXANES suggests Zn complexation with histidine, as opposed to malate in the bulk leaf. These findings shed new light on the dynamic nature of Zn speciation in plants.


Assuntos
Plantas Comestíveis/metabolismo , Poluentes do Solo/análise , Verduras/metabolismo , Zinco/análise , Monitoramento Ambiental , Folhas de Planta/química , Folhas de Planta/metabolismo , Raízes de Plantas/química , Raízes de Plantas/metabolismo , Plantas Comestíveis/química , Raphanus/química , Raphanus/metabolismo , Sementes/química , Sementes/metabolismo , Solo/química , Poluentes do Solo/metabolismo , Spinacia oleracea/química , Spinacia oleracea/metabolismo , Trifolium/química , Trifolium/metabolismo , Verduras/química , Zinco/metabolismo
5.
Environ Sci Process Impacts ; 22(3): 642-652, 2020 Mar 01.
Artigo em Inglês | MEDLINE | ID: mdl-32108209

RESUMO

Naturally formed halogenated organic compounds are common in terrestrial and marine environments and play an important role in the halogen cycle. Among these halogenated compounds, chlorinated organic compounds are the most common halogenated species in all soils and freshwater sediments. This study evaluated how a previously observed phenomenon of bromination of organic matter in coastal soils due to salt-water intrusion impacts the stability and fate of natural organochlorine (org-Cl) in coastal wetland soils. The reacted solid and liquid samples were analyzed using X-ray spectroscopy (in cm and at micron scales for solids) and ion chromatography. We find that introduction of Br- species and their subsequent reactions with organic carbon are associated with an average of 39% loss of org-Cl species from leaf litter and soil. The losses are more prominent in org-Cl hotspots of leaf litter, and both aliphatic and aromatic organochlorine compounds are lost from all samples at high Br- concentrations. The combination of solid and aqueous phase analysis suggests that org-Cl loss is most likely largely associated with volatilization of org-Cl. Release of labile org-Cl compounds has detrimental environmental implications for both ecosystem toxicity, and stratospheric ozone. The reactions similar to those observed here can also have implications for the reactions of xenobiotic chlorinated compounds in soils.


Assuntos
Brometos , Poluentes do Solo/análise , Áreas Alagadas , Baías , Ecossistema , Solo , South Carolina
6.
Environ Sci Technol ; 54(7): 3960-3968, 2020 04 07.
Artigo em Inglês | MEDLINE | ID: mdl-32097551

RESUMO

The conversion of inorganic mercury (Hg(II)) to methylmercury (MeHg) is central to the understanding of Hg toxicity in the environment. Hg methylation occurs in the cytosol of certain obligate anaerobic bacteria and archaea possessing the hgcAB gene cluster. However, the processes involved in Hg(II) biouptake and methylation are not well understood. Here, we examined the role of cell surface thiols, cellular ligands with the highest affinity for Hg(II) that are located at the interface between the outer membrane and external medium, on the sorption and methylation of Hg(II) by Geobacter sulfurreducens. The effect of added cysteine (Cys), which is known to greatly enhance Hg(II) biouptake and methylation, was also explored. By quantitatively blocking surface thiols with a thiol binding ligand (qBBr), we show that surface thiols have no significant effect on Hg(II) methylation, regardless of Cys addition. The results also identify a significant amount of cell-associated Hg-S3/S4 species, as studied by high energy-resolution X-ray absorption near edge structure (HR-XANES) spectroscopy, under conditions of high MeHg production (with Cys addition). In contrast, Hg-S2 are the predominant species during low MeHg production. Hg-S3/S4 species may be related to enhanced Hg(II) biouptake or the ability of Hg(II) to become methylated by HgcAB and should be further explored in this context.


Assuntos
Mercúrio , Compostos de Metilmercúrio , Bactérias , Ligantes , Metilação
7.
J Phys Chem Lett ; 10(10): 2585-2592, 2019 May 16.
Artigo em Inglês | MEDLINE | ID: mdl-31039606

RESUMO

Identifying the zinc (Zn) ligation and coordination environment in complex biological and environmental systems is crucial to understand the role of Zn as a biologically essential but sometimes toxic metal. Most studies on Zn coordination in biological or environmental samples rely on the extended X-ray absorption fine structure (EXAFS) region of a Zn K-edge X-ray absorption spectroscopy (XAS) spectrum. However, EXAFS analysis cannot identify unique nearest neighbors with similar atomic number (i.e., O versus N) and provides little information on Zn ligation. Herein, we demonstrate that high energy resolution-X-ray absorption near edge structure (HR-XANES) spectroscopy enables the direct determination of Zn ligation in whole cell bacteria, providing additional insights lost from EXAFS analysis at a fraction of the scan time and Zn concentration. HR-XANES is a relatively new technique that has improved our understanding of trace metals (e.g., Hg, Cu, and Ce) in dilute systems. This study is the first to show that HR-XANES can unambiguously detect Zn coordination to carboxyl, phosphoryl, imidazole, and/or thiol moieties in model microorganisms.


Assuntos
Bacillus subtilis/química , Pseudomonas putida/química , Zinco/química , Bacillus subtilis/citologia , Pseudomonas putida/citologia , Espectroscopia por Absorção de Raios X
8.
J Environ Qual ; 48(2): 233-235, 2019 03.
Artigo em Inglês | MEDLINE | ID: mdl-30951138

RESUMO

Natural organic matter (NOM) is ubiquitous on the Earth surface and influences every biogeochemical reaction wherever it is present, and its impact on reactions varies with its abundance, structure, and chemistry. Because of decades of field and laboratory studies conducted on NOM in different environments, we are moving away from treating it as a black box to developing molecular structure-based approaches in investigations of soil, sediment, and aquatic systems and are beginning to make major advances in the detailed understanding of the molecular and structural characteristics of NOM, which in turn are helping in deciphering the biochemical processes involved in its evolution in the environment. Yet, many questions remain: How does NOM exist in different soil and aquatic environments? How should we obtain NOM from a sample, and does the isolated NOM represent the NOM in a sample? Do the geochemical reactions explored with extracted NOM represent the reality? How can we study NOM in situ? Here I present a synopsis of critical perspectives on the state of NOM research and a commentary on the reviews and debate presented in this special section on the NOM nomenclature, extraction procedures, and studies involving NOM in different environmental processes.


Assuntos
Ecossistema , Substâncias Húmicas/análise , Álcalis , Solo
9.
Chemosphere ; 187: 130-139, 2017 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-28846968

RESUMO

Although abiotic process of competitive sorption between phosphate (P) and arsenate (As(V)), especially onto iron oxides, are well understood, P-mediated biotic processes of Fe and As redox transformation contributing to As mobilization and speciation in wetlands remain poorly defined. To gain new insights into the effects of P on As mobility, speciation, and bioavailability in wetlands, well-controlled greenhouse experiments were conducted. As expected, increased P levels contributed to more As desorption, but more interestingly the interactions between P and wetland plants played a synergistic role in the microbially-mediated As mobilization and enhanced As uptake by plants. High levels of P promoted plant growth and the exudation of labile organic carbon from roots, enhancing the growth of heterotrophic bacteria, including As and Fe reducers. This in turn resulted in both, more As desorption into solution due to reductive iron dissolution, and a higher fraction of the dissolved As in the form of As(III) due to the higher number of As(V) reducers. Consistent with the dissolved As results, arsenic-XANES spectra from solid medium samples demonstrated that more As was sequestered in the rhizosphere as As(III) in the presence of high P levels than for low P levels. Hence, increased P loading to wetlands stimulates both abiotic and biotic processes in the wetland rhizosphere, resulting in more As mobilization, more As reduction, as well as more As uptake by plants. These interactions are important to be taken into account in As fate and transport models in wetlands and management of wetlands containing As.


Assuntos
Arsênio/química , Fosfatos/química , Rizosfera , Áreas Alagadas , Adsorção , Arseniatos , Bactérias/crescimento & desenvolvimento , Bactérias/metabolismo , Disponibilidade Biológica , Compostos Férricos/química , Oxirredução , Raízes de Plantas/metabolismo
10.
J Hazard Mater ; 321: 382-389, 2017 Jan 05.
Artigo em Inglês | MEDLINE | ID: mdl-27669379

RESUMO

Microbial redox transformations of arsenic (As) are coupled to dissimilatory iron and sulfate reduction in the wetlands, however, the processes involved are complex and poorly defined. In this study, we investigated the effect of dissimilatory iron and sulfate reduction on As dynamics in the wetland rhizosphere and its bioaccumulation in plants using greenhouse mesocosms. Results show that high Fe (50µM ferrihydrite/g solid medium) and SO42- (5mM) treatments are most favorable for As sequestration in the presence of wetland plants (Scirpus actus), probably because root exudates facilitate the microbial reduction of Fe(III), SO42-, and As(V) to sequester As(III) by incorporation into iron sulfides and/or plant uptake. As retention in the solid medium and accumulation in plants were mainly controlled by SO42- rather than Fe levels. Compared to the low SO42- (0.1mM) treatment, high SO42- resulted in 2 times more As sequestered in the solid medium, 30 times more As in roots, and 49% less As in leaves. An As speciation analysis in pore water indicated that 19% more dissolved As was reduced under high SO42- than low SO42- levels, which is consistent with the fact that more dissimilatory arsenate-respiring bacteria were found under high SO42- levels.


Assuntos
Arsênio/análise , Cyperaceae/metabolismo , Poluentes Ambientais/análise , Compostos Férricos/química , Sulfatos/química , Áreas Alagadas , Arsênio/metabolismo , Biodegradação Ambiental , Cyperaceae/crescimento & desenvolvimento , Cyperaceae/microbiologia , Poluentes Ambientais/metabolismo , Oxirredução , Raízes de Plantas/metabolismo , Raízes de Plantas/microbiologia , Rizosfera
11.
J Am Chem Soc ; 137(41): 13325-33, 2015 Oct 21.
Artigo em Inglês | MEDLINE | ID: mdl-26403582

RESUMO

Nacre, or mother-of-pearl, the iridescent inner layer of many mollusk shells, is a biomineral lamellar composite of aragonite (CaCO3) and organic sheets. Biomineralization frequently occurs via transient amorphous precursor phases, crystallizing into the final stable biomineral. In nacre, despite extensive attempts, amorphous calcium carbonate (ACC) precursors have remained elusive. They were inferred from non-nacre-forming larval shells, or from a residue of amorphous material surrounding mature gastropod nacre tablets, and have only once been observed in bivalve nacre. Here we present the first direct observation of ACC precursors to nacre formation, obtained from the growth front of nacre in gastropod shells from red abalone (Haliotis rufescens), using synchrotron spectromicroscopy. Surprisingly, the abalone nacre data show the same ACC phases that are precursors to calcite (CaCO3) formation in sea urchin spicules, and not proto-aragonite or poorly crystalline aragonite (pAra), as expected for aragonitic nacre. In contrast, we find pAra in coral.


Assuntos
Minerais/química , Nácar/química , Nanotecnologia , Microscopia Eletrônica de Varredura , Espectroscopia por Absorção de Raios X
12.
Environ Sci Technol ; 48(10): 5798-807, 2014 May 20.
Artigo em Inglês | MEDLINE | ID: mdl-24766407

RESUMO

Elevated levels of fluoride (F(-)) in groundwaters of granitic and basaltic terrains pose a major environmental problem and are affecting millions of people all over the world. Hydroxyapatite (HA) has been shown to be a strong sorbent for F(-); however, low permeability of synthetic HA results in poor sorption efficiency. Here we provide a novel method of synthesizing nano- to micrometer sized HA on the surfaces of granular limestone to improve the sorption efficiency of the HA-based filter. Our experiments with granular limestone (38-63, 125-500 µm) and dissolved PO4(3-) (0.5-5.3 mM) as a function of pH (6-8) and temperature (25-80 °C) indicated rapid formation of nano- to micrometer sized HA crystals on granular limestone with the maximum surface coverage at lower pH and in the presence of multiple additions of aqueous PO4(3-). The HA crystal morphology varied with the above variables. The sorption kinetics and magnitude of F(-) sorption by HA-coated-fine limestone are comparable to those of pure HA, and the F(-) levels dropped to below the World Health Organization's drinking water limit of 79 µM for F(-) concentrations commonly encountered in contaminated potable waters, suggesting that these materials could be used as effective filters. Fluorine XANES spectra of synthetic HA reacted with F(-) suggest that the mode of sorption is through the formation of fluoridated-HA or fluorapatite at low F(-) levels and fluorite at high F(-) loadings.


Assuntos
Carbonato de Cálcio/química , Carbonato de Cálcio/síntese química , Durapatita/síntese química , Fluoretos/isolamento & purificação , Nanopartículas/química , Adsorção , Cristalização , Durapatita/química , Meio Ambiente , Fluoretos/química , Concentração de Íons de Hidrogênio , Cinética , Minerais/química , Fosfatos/química , Espectroscopia de Infravermelho com Transformada de Fourier , Temperatura , Fatores de Tempo , Espectroscopia por Absorção de Raios X , Difração de Raios X
13.
Environ Sci Technol ; 46(18): 9854-61, 2012 Sep 18.
Artigo em Inglês | MEDLINE | ID: mdl-22916681

RESUMO

Organic thiols are highly reactive ligands and play an important role in the speciation of several metals and organic pollutants in the environment. Although small thiols can be isolated and their concentrations can be estimated using chromatographic and derivatization techniques, estimating concentrations of thiols associated with biomacromolecules and humic substances has been difficult. Here we present a fluorescence-spectroscopy-based method for estimating thiol concentrations in biomacromolecules and cell membranes using one of the soluble bromobimanes, monobromo(trimethylammonio)bimane (qBBr). The fluorescence of this molecule increases significantly when it binds to a thiol. The change in the sample fluorescence due to thiols reacting with qBBr is used to determine thiol concentration in a sample. Using this method, small thiols such as cysteine and glutathione can be detected in clean solutions down to ~50 nM without their separation and prior concentration. Thiols associated with dissolved organic matter (DOM) can be detected down to low micromolar concentration, depending on the DOM background fluorescence. The charge on qBBr prevents its rapid diffusion across cell membranes, so qBBr is ideal for estimating thiol concentration at the cell membrane-water interface. This method was successfully used to determine the thiol concentration on the cell envelope of intact Bacillus subtilis to nanomolar concentration without any special sample preparation. Among the chemical species tested for potential interferences (other reduced sulfides methionine and cystine, carboxylate, salt (MgCl(2))), carboxylates significantly influenced the absolute fluorescence signal of the thiol-qBBr complex. However, this does not affect the detection of thiols in heterogeneous mixtures using the presented method.


Assuntos
Bacillus subtilis/química , Corantes Fluorescentes/química , Substâncias Húmicas/análise , Compostos de Amônio Quaternário/química , Espectrometria de Fluorescência/métodos , Compostos de Sulfidrila/análise , Cisteína/análise , Glutationa/análise , Sensibilidade e Especificidade
14.
Appl Environ Microbiol ; 78(2): 393-401, 2012 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-22101035

RESUMO

The phylum Chloroflexi contains several isolated bacteria that have been found to respire a diverse array of halogenated anthropogenic chemicals. The distribution and role of these Chloroflexi in uncontaminated terrestrial environments, where abundant natural organohalogens could function as potential electron acceptors, have not been studied. Soil samples (116 total, including 6 sectioned cores) from a range of uncontaminated sites were analyzed for the number of Dehalococcoides-like Chloroflexi 16S rRNA genes present. Dehalococcoides-like Chloroflexi populations were detected in all but 13 samples. The concentrations of organochlorine ([organochlorine]), inorganic chloride, and total organic carbon (TOC) were obtained for 67 soil core sections. The number of Dehalococcoides-like Chloroflexi 16S rRNA genes positively correlated with [organochlorine]/TOC while the number of Bacteria 16S rRNA genes did not. Dehalococcoides-like Chloroflexi were also observed to increase in number with a concomitant accumulation of chloride when cultured with an enzymatically produced mixture of organochlorines. This research provides evidence that organohalide-respiring Chloroflexi are widely distributed as part of uncontaminated terrestrial ecosystems, they are correlated with the fraction of TOC present as organochlorines, and they increase in abundance while dechlorinating organochlorines. These findings suggest that organohalide-respiring Chloroflexi may play an integral role in the biogeochemical chlorine cycle.


Assuntos
Chloroflexi/isolamento & purificação , Chloroflexi/metabolismo , Hidrocarbonetos Halogenados/metabolismo , Microbiologia do Solo , Carga Bacteriana , DNA Bacteriano/química , DNA Bacteriano/genética , DNA Ribossômico/química , DNA Ribossômico/genética , Dados de Sequência Molecular , RNA Ribossômico 16S/genética , Análise de Sequência de DNA , Solo/química
15.
J Phys Chem A ; 114(20): 6138-48, 2010 May 27.
Artigo em Inglês | MEDLINE | ID: mdl-20443586

RESUMO

Aqueous-phase X-ray absorption near-edge structure (XANES) spectra were collected on dissolved Al complexes with organic ligands, including desferrioxamine B, EDTA, acetohydroxamate, malate, oxalate, and salicylate. Spectral interpretations were made using the density functional theory-based modeling package StoBe. The goals of this work were to study the geometric and electronic structural characteristics of these complexes relative to Al(H(2)O)(6)(3+) and to examine the utility of the aqueous Al XANES technique as a tool for probing Al speciation and structure. In the case of EDTA, aqueous Fourier-transform infrared spectroscopy was also used to corroborate the structures of the Al(EDTA)(-) and AlOH(EDTA)(2-) complexes. Synthetic XANES spectra calculated with StoBe reproduced the observed spectral differences between Al(H(2)O)(6)(3+), Al(dfoB)(+), and Al(EDTA)(-). The narrower XANES feature observed for Al(dfoB)(+) relative to Al(H(2)O)(6)(3+) can be attributed to a weaker splitting of the Al 3p-O 2p interactions in the former, while Al(EDTA)(-) exhibits split Al 3p-ligand interactions that likely result from the mixed O/N coordination. In complexes with mixed aqua/organic-oxygen ligation (Al-acetohydroxamate, Al-malate, Al-oxalate, and Al-salicylate), spectra exhibit linear, systematic changes in peak width as a function of H(2)O to organic ligand ratio in the Al coordination sphere. These results highlight the sensitivity of the aqueous Al K-edge XANES spectrum to coordination environment and demonstrate its utility as an experimental probe for future studies of Al speciation in complex solutions.

16.
J Phys Chem A ; 112(42): 10595-603, 2008 Oct 23.
Artigo em Inglês | MEDLINE | ID: mdl-18826294

RESUMO

The bonding environment of the aqueous Al(H2O)6(3+) complex was studied using X-ray absorption near-edge structure (XANES) spectroscopy at the Al K-edge, with spectral interpretations based on density functional theory (DFT). Calculations for a highly symmetric complex (T(h) symmetry) indicate electron transitions into Al3 p-O 2s and Al3 p-O 2p antibonding orbitals, with a split O 2p contribution that appears to be due to a weak pi-interaction of the Al 3p orbitals with water ligands off-axis (equatorial) with respect to the Al 3p axis. Calculations were performed with several hypothetical structures to assess the effects of Al-O bond length, orientation of water ligands in the first coordination shell, and the presence of a second solvation shell on the XANES spectrum. Similar transitions were observed in all of these cases, but with further splitting on addition of 12 solvation waters, inward tilting and random twisting of the water ligands, and nonuniform Al-O bond lengths. Although it was previously hypothesized that the broadness of the XANES spectrum for this complex is due to an asymmetric geometry, these results illustrate how an Al(H 2O)6(3+) geometry that is octahedral (O(h)) with respect to the Al-O6 core could produce the broad spectrum observed. Because geometric distortions would affect relative Al-O bond strengths, an understanding of the equilibrium Al(H2O)6(3+) geometry is prerequisite to a quantitative description of reaction chemistry, including acidity and ligand exchange.


Assuntos
Compostos de Alumínio/química , Modelos Químicos , Água/química , Simulação por Computador , Elétrons , Estrutura Molecular , Análise Espectral , Raios X
17.
J Biol Inorg Chem ; 12(3): 367-76, 2007 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-17171370

RESUMO

Azotochelin is a biscatecholate siderophore produced by the nitrogen-fixing soil bacterium Azotobacter vinelandii. The complexation properties of azotochelin with a series of oxoanions [Mo(VI), W(VI) and V(V)] and divalent cations [Cu(II), Zn(II), Co(II) and Mn(II)] were investigated by potentiometry, UV-vis and X-ray spectroscopy. Azotochelin forms a strong 1:1 complex with molybdate (log K=7.6+/-0.4) and with tungstate and vanadate; the stability of the complexes increases in the order Mo

Assuntos
Lisina/análogos & derivados , Metais Pesados/química , Sideróforos/química , Ânions , Azotobacter vinelandii/química , Azotobacter vinelandii/metabolismo , Cátions Bivalentes , Concentração de Íons de Hidrogênio , Lisina/química , Estrutura Molecular
18.
J Phys Chem A ; 110(42): 11809-18, 2006 Oct 26.
Artigo em Inglês | MEDLINE | ID: mdl-17048812

RESUMO

X-ray absorption spectroscopy (XAS) is widely used to explore the coordination environments and structures of metal complexes in aqueous solutions and disordered phases. Although soft-XAS studies on gaseous phases, solid phases and their interfaces have shown that XAS is a versatile tool in studying the functional group composition of organic molecules, the application of XAS to studying aqueous solutions is seriously limited because of experimental difficulties. In this report, using a modified synchrotron endstation geometry, we show how soft-XAS was used to study the changes in electronic states of reactive functional groups in a bacterial macromolecule, desferrioxamine B (desB, a hydroxamate siderophore) and its structural analogue (acetohydroxamic acid (aHa)). We collected C, N, and O near edge X-ray absorption fine structure (NEXAFS) spectra of these molecules in aqueous solutions and complemented their spectral interpretation with calculated X-ray spectra of "hydrated" aHa. The experimental spectra of desB are similar to those for aHa at the C, N, and O K-edges. In addition, the electronic transitions of amide and hydroxamate functional groups in the macromolecule can be distinguished from the N spectra. Small energy differences in the pi*(C=O)NO and the transitions at the C- and N-edges of aHa and desB indicate that the substituent attached to N in desB ((CH2)n) determines the electron density in the (C=O)NO core. As the solution pH increased, the pi*(C=O)NO transition of the hydroxamate group of these two molecules exhibit energy shifts at the C-, N-, and O-edges, which are consistent with increased electron delocalization in the (C=O)NO core of aHa (and desB), predicted from the calculations. The spectra of the aHa(H2O)3- anion also provide evidence for partial N-deprotonation at pH values usually attributed to an O-acid. These results indicate that soft-XAS is well suited for studying the electronic states of different functional groups in aqueous organic macromolecules.


Assuntos
Bactérias/química , Desferroxamina/química , Ácidos Hidroxâmicos/química , Sideróforos/química , Concentração de Íons de Hidrogênio , Modelos Moleculares , Análise Espectral/instrumentação , Análise Espectral/métodos
19.
Anal Chem ; 78(16): 5711-8, 2006 Aug 15.
Artigo em Inglês | MEDLINE | ID: mdl-16906715

RESUMO

An in situ procedure for quantifying total organic and inorganic Cl concentrations in environmental samples based on X-ray absorption near-edge structure (XANES) spectroscopy has been developed. Cl 1s XANES spectra reflect contributions from all Cl species present in a sample, providing a definitive measure of total Cl concentration in chemically heterogeneous samples. Spectral features near the Cl K-absorption edge provide detailed information about the bonding state of Cl, whereas the absolute fluorescence intensity of the spectra is directly proportional to total Cl concentration, allowing for simultaneous determination of Cl speciation and concentration in plant, soil, and natural water samples. Absolute Cl concentrations are obtained from Cl 1s XANES spectra using a series of Cl standards in a matrix of uniform bulk density. With the high sensitivity of synchrotron-based X-ray absorption spectroscopy, Cl concentration can be reliably measured down to the 5-10 ppm range in solid and liquid samples. Referencing the characteristic near-edge features of Cl in various model compounds, we can distinguish between inorganic chloride (Cl(inorg)) and organochlorine (Cl(org)), as well as between aliphatic Cl(org) and aromatic Cl(org), with uncertainties in the range of approximately 6%. In addition, total organic and inorganic Br concentrations in sediment samples are quantified using a combination of Br 1s XANES and X-ray fluorescence (XRF) spectroscopy. Br concentration is detected down to approximately 1 ppm by XRF, and Br 1s XANES spectra allow quantification of the Br(inorg) and Br(org) fractions. These procedures provide nondestructive, element-specific techniques for quantification of Cl and Br concentrations that preclude extensive sample preparation.


Assuntos
Bromo/análise , Cloro/análise , Monitoramento Ambiental/métodos , Hidrocarbonetos Halogenados/análise , Espectrometria por Raios X/métodos
20.
J Chem Phys ; 124(19): 194508, 2006 May 21.
Artigo em Inglês | MEDLINE | ID: mdl-16729826

RESUMO

We present a combined x-ray absorption spectroscopy/computational study of water in hydrochloric acid (HCl) solutions of varying concentration to address the structure and bonding of excess protons and their effect on the hydrogen bonding network in liquid water. Intensity variations and energy shifts indicate changes in the hydrogen bonding structure in water as well as the local structure of the protonated complex as a function of the concentration of protons. In particular, in highly acidic solutions we find a dominance of the Eigen form, H(3)O(+), while the proton is less localized to a specific water under less acidic conditions.

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