Kinetics and mechanisms of chlorine dioxide oxidation of tryptophan.

The reactions of aqueous ClO2 (*) and tryptophan (Trp) are investigated by stopped-flow kinetics, and the products are identified by high-performance liquid chromatography (HPLC) coupled with electrospray ionization mass spectrometry and by ion chromatography. The rates of ClO2 (*) loss increase from pH 3 to 5, are essentially constant from pH 5 to 7, and increase from pH 7 to 10. The reactions are first-order in Trp with variable order in ClO2 (*). Below pH 5.0, the reactions are second- or mixed-order in [ClO2 (*)], depending on the chlorite concentration. Above pH 5.0, the reactions are first-order in [ClO2 (*)] in the absence of added chlorite. At pH 7.0, the Trp reaction with ClO2 (*) is first-order in each reactant with a second-order rate constant of 3.4 x 10(4) M(-1) s(-1) at 25.0 degrees C. In the proposed mechanism, the initial reaction is a one-electron oxidation to form a tryptophyl radical cation and chlorite ion. The radical cation deprotonates to form a neutral tryptophyl radical that combines rapidly with a second ClO 2 (*) to give an observable, short-lived adduct ( k obs = 48 s(-1)) with proposed C(H)-OClO bonding. This adduct decays to give HOCl in a three-electron oxidation. The overall reaction consumes two ClO2 (*) per Trp and forms ClO2- and HOCl. This corresponds to a four-electron oxidation. Decay of the tryptophyl-OClO adduct at pH 6.4 gives five initial products that are observed after 2 min and are separated by HPLC with elution times that vary from 4 to 17 min (with an eluent of 6.3% CH 3OH and 0.1% CH 3COOH). Each of these products is characterized by mass spectrometry and UV-vis spectroscopy. One initial product with a molecular weight of 236 decays within 47 min to yield the most stable product, N-formylkynurenine (NFK), which also has a molecular weight of 236. Other products also are observed and examined.

Chlorine dioxide oxidation of guanosine 5'-monophosphate.

The reactions between aqueous ClO2 and guanosine 5'-monophosphate (5'-GMP) are investigated from pH 5.96 to 8.30. The decay of ClO2 follows mixed first-order and second-order kinetics. The addition of chlorite (0.01-0.05 M) to the reaction mixture suppresses the reaction rate and changes the observed decay of ClO2 to second-order. The reaction rates increase greatly with pH to give oxidized products. The second-order rate constant for the guanosine anion is 4.7 x 10(5 )M-1 s-1 and comprises a mixture of rate constants, k1k2/k-1. The ratio k1/k-1, with a calculated value of 2.4 x 10(-4), corresponds to the reversible reaction between ClO2 and the guanosine anion to generate ClO2- and the guanosyl radical. To determine k1/k-1 and k2, E values for guanosine and ClO2 are used as well as acid dissociation constants for guanosine and its radical. The value of k1 (1.1 x 10(5) M-1 s-1) represents the reaction between ClO2 and the guanosine anion as determined by initial rates. The second-order rate constant k2, with a value of 1.8 x 10(9 )M-1 s-1, represents the reaction between the guanosyl radical with a second molecule of ClO2 to generate a guanosyl-OClO adduct. The consumption of two mol of ClO2 per mol of 5'-GMP corresponds to a four-electron oxidation that gives ClO(2- )in the first step and HOCl in the second step. The 2',3',5'-tri-O-acetylated derivative of guanosine is used to more easily separate guanosine from its ClO2 oxidation products. Imidazolone and monochlorinated imidazolone are identified as products of the reaction between ClO2 and guanosine.

Quantitating adenylate nucleotides in diverse organisms.

Quantitation of cellular adenylate levels (i.e., ATP, ADP, AMP) has widespread applications in physiological, metabolic and energetic studies. We have compared classical adenylate extraction procedures (i.e., perchloric acid, boiling) with a previously unreported proteinase K-based extraction technique. Our results suggest that all three techniques are comparable in soft animal tissue, but proteinase K-based extractions consistently generated higher adenylate yields from a broad range of organisms, particularly those containing a cell wall (e.g., alga, bacteria, fungi, plant).

Chlorine dioxide oxidations of tyrosine, N-acetyltyrosine, and dopa.

The reactions of aqueous ClO2 with tyrosine, N-acetyltyrosine, and dopa (3,4-dihydroxyphenylalanine) are investigated from pH 4 to 7. The reaction rates increase greatly with pH to give a series of oxidized products. Tyrosine and N-acetyltyrosine have similar reactivities with second-order rate constants (25.0 degrees C) for their phenoxide forms equal to 1.8x10(8) and 7.6x10(7) M-1 s-1, respectively. Both species generate phenoxyl radicals that react rapidly with a second ClO2 at the 3 position to give observable but short-lived adducts with proposed C(H)OClO bonding. The decay of these phenoxyl-ClO2 adducts also is rapid and is base-assisted to form dopaquinone (from tyrosine) and N-acetyldopaquinone (from N-acetyltyrosine) as initial products. The consumption of two ClO2 molecules corresponds to a four-electron oxidation that gives ClO2- in the first step and HOCl in the second step. The reaction between ClO2 and the deprotoned-catechol form of dopa is extremely fast (2.8x10(9) M-1 s-1). Dopa consumes two ClO2 to give dopaquinone and 2ClO2- as products. Above pH 4, dopaquinone cyclizes to give cyclodopa, which in turn is rapidly oxidized to dopachrome. A resolved first-order rate constant of 249 s-1 is evaluated for the cyclization of the basic form of dopaquinone that leads to dopachrome as a product with strong absorption bands at 305 and 485 nm.

Distinctions in adenylate metabolism among organisms inhabiting temperature extremes.

Microbiota from multiple kingdoms (e.g., Eubacteria, Fungi, Protista) thrive at temperature optima ranging from 0-20 degrees C (psychrophiles) to 40-85 degrees C (thermophiles). In this study, we have monitored changes in adenylate levels and growth rate as a function of temperature in disparate thermally adapted organisms. Our data indicate that growth rate and adenylate levels increase with temperature in mesophilic and thermophilic species, but rapid losses of adenosine 5'-triphosphate (ATP) occur upon cold or heat shock. By contrast, psychrophilic species decrease adenylate levels but increase growth rate as temperatures rise within their viable range. Moreover, psychrophilic ATP levels fell rapidly upon heat shock, but dramatic gains in ATP (approximately 20-50%) were observed upon cold shock, even at sub-zero temperatures. These results suggest that energy metabolism in thermophiles resembles that in mesophiles, but that elevated adenylate nucleotides in psychrophiles may constitute a compensatory strategy for maintaining biochemical processes at low temperature.

Four kingdoms on glacier ice: convergent energetic processes boost energy levels as temperatures fall.

A diverse group of glacially obligate organisms coexist on temperate glaciers between Washington State and Alaska. A fundamental challenge for these and other cold-adapted species is the necessity to maintain an energy flux capable of sustaining life at low physiological temperatures. We show here that ice-adapted psychrophiles from four kingdoms (Animalia, Eubacteria, Fungi, Protista) respond to temperature fluctuations in a similar manner; namely, ATP levels and the total adenylate pool increase as temperatures fall (within their viable temperature limits, respectively), yet growth rate increases with temperature. By contrast, mesophilic representatives of each kingdom respond in an opposite manner (i.e. adenylates increase with temperature). These observations suggest that elevated adenylate levels in psychrophiles may offset inherent reductions in molecular diffusion at low physiological temperatures.

The ice worm, Mesenchytraeus solifugus, elevates adenylate levels at low physiological temperature.

The ice worm, Mesenchytraeus solifugus, is among a few metazoan species that survive exclusively in glacier ice/snow. In this study, we demonstrate that ice worm adenylate levels [i.e. adenosine 5'-triphosphate (ATP), ADP and AMP] are maintained at levels well above their mesophilic counterparts, and that their response to temperature change is distinctly opposite, namely, ice worms increase energy levels as temperatures fall. Initially, this response is characterized by a sharp spike in [ATP] and the adenylate energy charge (even at sub-zero temperatures), which is followed by corresponding increases in [ADP] and [AMP] within a few days. These results suggest that ice worms have evolved a compensatory mechanism by which gains in adenylate nucleotides off-set, at least in part, the inherent lethargy and death usually associated with cold temperature.