Screening methods for linear errors-in-variables models in high dimensions.

Microarray studies, in order to identify genes associated with an outcome of interest, usually produce noisy measurements for a large number of gene expression features from a small number of subjects. One common approach to analyzing such high-dimensional data is to use linear errors-in-variables (EIV) models; however, current methods for fitting such models are computationally expensive. In this paper, we present two efficient screening procedures, namely, corrected penalized marginal screening (PMSc) and corrected sure independence screening (SISc), to reduce the number of variables for final model building. Both screening procedures are based on fitting corrected marginal regression models relating the outcome to each contaminated covariate separately, which can be computed efficiently even with a large number of features. Under mild conditions, we show that these procedures achieve screening consistency and reduce the number of features substantially, even when the number of covariates grows exponentially with sample size. In addition, if the true covariates are weakly correlated, we show that PMSc can achieve full variable selection consistency. Through a simulation study and an analysis of gene expression data for bone mineral density of Norwegian women, we demonstrate that the two new screening procedures make estimation of linear EIV models computationally scalable in high-dimensional settings, and improve finite sample estimation and selection performance compared with estimators that do not employ a screening stage.

Initial evidence for a relation between behaviorally assessed empathic accuracy and affect sharing for people and music.

Are people who are better able to understand or feel the emotions of others also better at understanding or feeling emotions conveyed through music? Although evolutionary theories have proposed that both empathy and music help to foster social connection, few studies to date have examined the relation between behavioral assessments of empathic processes for people and music. We examined this question using 2 independent samples: a laboratory sample of undergraduates (n = 236) and a larger online direct replication with participants across the United States (n = 596). Across both samples, linear mixed effects models showed positive associations between empathic accuracy and affect sharing for people telling personal stories and for musical expression, and results were maintained when including relevant individual differences as covariates. These findings provide initial evidence of a relation between behaviorally assessed empathic processes across social and musical domains. Future research is needed to build upon this evidence by investigating whether active, socially engaged music listening may have a beneficial effect on social cognition. (PsycInfo Database Record (c) 2023 APA, all rights reserved).

Simulation-selection-extrapolation: Estimation in high-dimensional errors-in-variables models.

Errors-in-variables models in high-dimensional settings pose two challenges in application. First, the number of observed covariates is larger than the sample size, while only a small number of covariates are true predictors under an assumption of model sparsity. Second, the presence of measurement error can result in severely biased parameter estimates, and also affects the ability of penalized methods such as the lasso to recover the true sparsity pattern. A new estimation procedure called SIMulation-SELection-EXtrapolation (SIMSELEX) is proposed. This procedure makes double use of lasso methodology. First, the lasso is used to estimate sparse solutions in the simulation step, after which a group lasso is implemented to do variable selection. The SIMSELEX estimator is shown to perform well in variable selection, and has significantly lower estimation error than naive estimators that ignore measurement error. SIMSELEX can be applied in a variety of errors-in-variables settings, including linear models, generalized linear models, and Cox survival models. It is furthermore shown in the Supporting Information how SIMSELEX can be applied to spline-based regression models. A simulation study is conducted to compare the SIMSELEX estimators to existing methods in the linear and logistic model settings, and to evaluate performance compared to naive methods in the Cox and spline models. Finally, the method is used to analyze a microarray dataset that contains gene expression measurements of favorable histology Wilms tumors.

Density estimation in the presence of heteroscedastic measurement error of unknown type using phase function deconvolution.

It is important to properly correct for measurement error when estimating density functions associated with biomedical variables. These estimators that adjust for measurement error are broadly referred to as density deconvolution estimators. While most methods in the literature assume the distribution of the measurement error to be fully known, a recently proposed method based on the empirical phase function (EPF) can deal with the situation when the measurement error distribution is unknown. The EPF density estimator has only been considered in the context of additive and homoscedastic measurement error; however, the measurement error of many biomedical variables is heteroscedastic in nature. In this paper, we developed a phase function approach for density deconvolution when the measurement error has unknown distribution and is heteroscedastic. A weighted EPF (WEPF) is proposed where the weights are used to adjust for heteroscedasticity of measurement error. The asymptotic properties of the WEPF estimator are evaluated. Simulation results show that the weighting can result in large decreases in mean integrated squared error when estimating the phase function. The estimation of the weights from replicate observations is also discussed. Finally, the construction of a deconvolution density estimator using the WEPF is compared with an existing deconvolution estimator that adjusts for heteroscedasticity but assumes the measurement error distribution to be fully known. The WEPF estimator proves to be competitive, especially when considering that it relies on minimal assumption of the distribution of measurement error.