Reproductive success and genetic diversity of Psychotria hastisepala (Rubiaceae), in fragmented Atlantic forest, Southeastearn Brazil.

The impacts of forest fragmentation on both reproductive biology and genetic diversity of native plant species is hardly understood, despite some studies have analyzed this current worldwide problem. Since this constitutes one of the main threats to seasonal semi-deciduous forests in Southeastern Brazil, we investigated the reproductive success and the genetic diversity of a distylous, understory shrub (Psychotria hastisepala) within this context of forest fragmentation. For this study, a set of seven forest fragments of sizes ranging from 4.1 to 168.7 hectares were chosen. The intervenient matrix comprised pastures (25-50%), monocultures (33-50%) and rural roads and buildings (14-28.5%). Overall, 91 plants (54 for the short-styled morph and 37 for the long-styled morph; mean of 6.5 plants per fragment) were investigated. To evaluate reproductive success, we quantified fruit and seed production under natural pollination; to evaluate genetic diversity and population structure, we employed ISSR markers on genomic DNA. Plants with the short-styled morph exhibited a significantly higher reproductive success than those with the long-styled morph; there was no association between seed production and size of the forest fragment. Levels of genetic diversity were positively associated with the number of plants per fragment; but they were not related to flower morph. AMOVA showed that about 65% of the overall genetic variation was attributed to the differences between plants within fragments. The results suggested that populations of P. hastisepala were susceptible to decline owing to forest fragmentation.

Reproductive success and genetic diversity of Psychotria hastisepala (Rubiaceae), in fragmented Atlantic forest, Southeastearn Brazil

The impacts of forest fragmentation on both reproductive biology and genetic diversity of native plant species is hardly understood, despite some studies have analyzed this current worldwide problem. Since this constitutes one of the main threats to seasonal semi-deciduous forests in Southeastern Brazil, we investigated the reproductive success and the genetic diversity of a distylous, understory shrub (Psychotria hastisepala) within this context of forest fragmentation. For this study, a set of seven forest fragments of sizes ranging from 4.1 to 168.7 hectares were chosen. The intervenient matrix comprised pastures (25-50%), monocultures (33-50%) and rural roads and buildings (14-28.5%). Overall, 91 plants (54 for the short-styled morph and 37 for the long-styled morph; mean of 6.5 plants per fragment) were investigated. To evaluate reproductive success, we quantified fruit and seed production under natural pollination; to evaluate genetic diversity and population structure, we employed ISSR markers on genomic DNA. Plants with the short-styled morph exhibited a significantly higher reproductive success than those with the long-styled morph; there was no association between seed production and size of the forest fragment. Levels of genetic diversity were positively associated with the number of plants per fragment; but they were not related to flower morph. AMOVA showed that about 65% of the overall genetic variation was attributed to the differences between plants within fragments. The results suggested that populations of P. hastisepala were susceptible to decline owing to forest fragmentation. Rev. Biol. Trop. 62 (1): 309-319. Epub 2014 March 01.

Los impactos de la fragmentación de los bosques tanto en la biología reproductiva como en la diversidad genética de las especies de plantas nativas apenas se entienden, a pesar de que algunos estudios han analizado este problema mundial. Dado que esto constituye una de las principales amenazas para los bosques semi-deciduos estacionales en el sureste de Brasil, se investigó el éxito reproductivo y la diversidad genética de un arbusto de sotobosque, Psychotria hastisepala, en un bosque fragmentado. Para este estudio, se seleccionaron siete fragmentos de tamaños que van desde 4.1 hasta 168.7 hectáreas. La matriz intervenida comprende pastos (25-50%), monocultivos (33-50%) y carreteras y edificios rurales (14-28.5%). En total, 91 plantas fueron investigadas (54 morfos florales brevistilo y 37 longistilo, con una media de 6.5 plantas por fragmento). Para evaluar el éxito reproductivo, se cuantificó la producción de frutos y semillas de plantas con polinización natural; para evaluar la diversidad genética y la estructura poblacional, se emplearon marcadores ISSR en el ADN genómico. Las plantas con morfo brevistilo exhibieron un éxito reproductivo significativamente más alto que las longistilo, no hubo asociación entre la producción de semillas y el tamaño del fragmento de bosque. Los niveles de diversidad genética se asociaron positivamente con el número de plantas por fragmento, pero que no estaban relacionados con los morfos florales. AMOVA mostró que alrededor del 65% de la variación genética en general se atribuyó a las diferencias entre plantas dentro de fragmentos. Los resultados sugieren que las poblaciones de P. hastisepala fueron susceptibles a disminuir debido a la fragmentación de los bosques.

Evolutionary history of Phakopsora pachyrhizi (the Asian soybean rust) in Brazil based on nucleotide sequences of the internal transcribed spacer region of the nuclear ribosomal DNA

Phakopsora pachyrhizi has dispersed globally and brought severe economic losses to soybean growers. The fungus has been established in Brazil since 2002 and is found nationwide. To gather information on the temporal and spatial patterns of genetic variation in P. pachyrhizi, we sequenced the nuclear internal transcribed spacer regions (ITS1 and ITS2). Total genomic DNA was extracted using either lyophilized urediniospores or lesions removed from infected leaves sampled from 26 soybean fields in Brazil and one field in South Africa. Cloning prior to sequencing was necessary because direct sequencing of PCR amplicons gave partially unreadable electrophoretograms with peak displacements suggestive of multiple sequences with length polymorphism. Sequences were determined from four clones per field. ITS sequences from African or Asian isolates available from the GenBank were included in the analyses. Independent sequence alignments of the ITS1 and ITS2 datasets identified 27 and 19 ribotypes, respectively. Molecular phylogeographic analyses revealed that ribotypes of widespread distribution in Brazil displayed characteristics of ancestrality and were shared with Africa and Asia, while ribotypes of rare occurrence in Brazil were indigenous. The results suggest P. pachyrhizi found in Brazil as originating from multiple, independent long-distance dispersal events.