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1.
Nat Commun ; 14(1): 4834, 2023 Aug 10.
Artigo em Inglês | MEDLINE | ID: mdl-37563164

RESUMO

Properties of nuclei in hot stellar environments such as supernovae or neutron star mergers are largely unexplored. Since it is poorly understood how many protons and neutrons can be bound together in hot nuclei, we investigate the limits of nuclear existence (drip lines) at finite temperature. Here, we present mapping of nuclear drip lines at temperatures up to around 20 billion kelvins using the relativistic energy density functional theory (REDF), including treatment of thermal scattering of nucleons in the continuum. With extensive computational effort, the drip lines are determined using several REDFs with different underlying interactions, demonstrating considerable alterations of the neutron drip line with temperature increase, especially near the magic numbers. At temperatures T ≲ 12 billion kelvins, the interplay between the properties of nuclear effective interaction, pairing, and temperature effects determines the nuclear binding. At higher temperatures, we find a surprizing result that the total number of bound nuclei increases with temperature due to thermal shell quenching. Our findings provide insight into nuclear landscape for hot nuclei, revealing that the nuclear drip lines should be viewed as limits that change dynamically with temperature.

2.
BMC Bioinformatics ; 9: 466, 2008 Nov 03.
Artigo em Inglês | MEDLINE | ID: mdl-18980673

RESUMO

BACKGROUND: Identification of approximate tandem repeats is an important task of broad significance and still remains a challenging problem of computational genomics. Often there is no single best approach to periodicity detection and a combination of different methods may improve the prediction accuracy. Discrete Fourier transform (DFT) has been extensively used to study primary periodicities in DNA sequences. Here we investigate the application of DFT method to identify and study alphoid higher order repeats. RESULTS: We used method based on DFT with mapping of symbolic into numerical sequence to identify and study alphoid higher order repeats (HOR). For HORs the power spectrum shows equidistant frequency pattern, with characteristic two-level hierarchical organization as signature of HOR. Our case study was the 16 mer HOR tandem in AC017075.8 from human chromosome 7. Very long array of equidistant peaks at multiple frequencies (more than a thousand higher harmonics) is based on fundamental frequency of 16 mer HOR. Pronounced subset of equidistant peaks is based on multiples of the fundamental HOR frequency (multiplication factor n for nmer) and higher harmonics. In general, nmer HOR-pattern contains equidistant secondary periodicity peaks, having a pronounced subset of equidistant primary periodicity peaks. This hierarchical pattern as signature for HOR detection is robust with respect to monomer insertions and deletions, random sequence insertions etc. For a monomeric alphoid sequence only primary periodicity peaks are present. The 1/fbeta- noise and periodicity three pattern are missing from power spectra in alphoid regions, in accordance with expectations. CONCLUSION: DFT provides a robust detection method for higher order periodicity. Easily recognizable HOR power spectrum is characterized by hierarchical two-level equidistant pattern: higher harmonics of the fundamental HOR-frequency (secondary periodicity) and a subset of pronounced peaks corresponding to constituent monomers (primary periodicity). The number of lower frequency peaks (secondary periodicity) below the frequency of the first primary periodicity peak reveals the size of nmer HOR, i.e., the number n of monomers contained in consensus HOR.


Assuntos
Biologia Computacional/métodos , Sequências de Repetição em Tandem , Algoritmos , Animais , Sequência de Bases , DNA/genética , Bases de Dados de Ácidos Nucleicos , Análise de Fourier , Humanos , Conformação de Ácido Nucleico , Análise de Sequência de DNA
3.
Rep Prog Phys ; 70(5)2007 May 01.
Artigo em Inglês | MEDLINE | ID: mdl-34996293

RESUMO

We review recent studies of the evolution of collective excitations in atomic nuclei far from the valley of ß-stability. Collective degrees of freedom govern essential aspects of nuclear structure, and for several decades the study of collective modes such as rotations and vibrations has played a vital role in our understanding of complex properties of nuclei. The multipole response of unstable nuclei and the possible occurrence of new exotic modes of excitation in weakly bound nuclear systems, present a rapidly growing field of research, but only few experimental studies of these phenomena have been reported so far. Valuable data on the evolution of the low-energy dipole response in unstable neutron-rich nuclei have been gathered in recent experiments, but the available information is not sufficient to determine the nature of observed excitations. Even in stable nuclei various modes of giant collective oscillations had been predicted by theory years before they were observed, and for that reason it is very important to perform detailed theoretical studies of the evolution of collective modes of excitation in nuclei far from stability. We therefore discuss the modern theoretical tools that have been developed in recent years for the description of collective excitations in weakly bound nuclei. The review focuses on the applications of these models to studies of the evolution of low-energy dipole modes from stable nuclei to systems near the particle emission threshold, to analyses of various isoscalar modes, those for which data are already available, as well as those that could be observed in future experiments, to a description of charge-exchange modes and their evolution in neutron-rich nuclei, and to studies of the role of exotic low-energy modes in astrophysical processes.

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