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1.
Comput Methods Programs Biomed ; 255: 108326, 2024 Jul 18.
Artigo em Inglês | MEDLINE | ID: mdl-39029416

RESUMO

BACKGROUND AND OBJECTIVE: Researchers commonly use automated solutions such as Natural Language Processing (NLP) systems to extract clinical information from large volumes of unstructured data. However, clinical text's poor semantic structure and domain-specific vocabulary can make it challenging to develop a one-size-fits-all solution. Large Language Models (LLMs), such as OpenAI's Generative Pre-Trained Transformer 3 (GPT-3), offer a promising solution for capturing and standardizing unstructured clinical information. This study evaluated the performance of InstructGPT, a family of models derived from LLM GPT-3, to extract relevant patient information from medical case reports and discussed the advantages and disadvantages of LLMs versus dedicated NLP methods. METHODS: In this paper, 208 articles related to case reports of foreign body injuries in children were identified by searching PubMed, Scopus, and Web of Science. A reviewer manually extracted information on sex, age, the object that caused the injury, and the injured body part for each patient to build a gold standard to compare the performance of InstructGPT. RESULTS: InstructGPT achieved high accuracy in classifying the sex, age, object and body part involved in the injury, with 94%, 82%, 94% and 89%, respectively. When excluding articles for which InstructGPT could not retrieve any information, the accuracy for determining the child's sex and age improved to 97%, and the accuracy for identifying the injured body part improved to 93%. InstructGPT was also able to extract information from non-English language articles. CONCLUSIONS: The study highlights that LLMs have the potential to eliminate the necessity for task-specific training (zero-shot extraction), allowing the retrieval of clinical information from unstructured natural language text, particularly from published scientific literature like case reports, by directly utilizing the PDF file of the article without any pre-processing and without requiring any technical expertise in NLP or Machine Learning. The diverse nature of the corpus, which includes articles written in languages other than English, some of which contain a wide range of clinical details while others lack information, adds to the strength of the study.

2.
IEEE Trans Biomed Circuits Syst ; 15(6): 1196-1209, 2021 12.
Artigo em Inglês | MEDLINE | ID: mdl-34673496

RESUMO

Hearth Rate (HR) monitoring is increasingly performed in wrist-worn devices using low-cost photoplethysmography (PPG) sensors. However, Motion Artifacts (MAs) caused by movements of the subject's arm affect the performance of PPG-based HR tracking. This is typically addressed coupling the PPG signal with acceleration measurements from an inertial sensor. Unfortunately, most standard approaches of this kind rely on hand-tuned parameters, which impair their generalization capabilities and their applicability to real data in the field. In contrast, methods based on deep learning, despite their better generalization, are considered to be too complex to deploy on wearable devices. In this work, we tackle these limitations, proposing a design space exploration methodology to automatically generate a rich family of deep Temporal Convolutional Networks (TCNs) for HR monitoring, all derived from a single "seed" model. Our flow involves a cascade of two Neural Architecture Search (NAS) tools and a hardware-friendly quantizer, whose combination yields both highly accurate and extremely lightweight models. When tested on the PPG-Dalia dataset, our most accurate model sets a new state-of-the-art in Mean Absolute Error. Furthermore, we deploy our TCNs on an embedded platform featuring a STM32WB55 microcontroller, demonstrating their suitability for real-time execution. Our most accurate quantized network achieves 4.41 Beats Per Minute (BPM) of Mean Absolute Error (MAE), with an energy consumption of 47.65 mJ and a memory footprint of 412 kB. At the same time, the smallest network that obtains a MAE 8 BPM, among those generated by our flow, has a memory footprint of 1.9 kB and consumes just 1.79 mJ per inference.


Assuntos
Fotopletismografia , Dispositivos Eletrônicos Vestíveis , Algoritmos , Artefatos , Frequência Cardíaca/fisiologia , Processamento de Sinais Assistido por Computador
3.
Artigo em Inglês | MEDLINE | ID: mdl-29994208

RESUMO

Organic Light Emitting Diode (OLED) display panels are becoming increasingly popular especially in mobile devices; one of the key characteristics of these panels is that their power consumption strongly depends on the displayed image. In this paper we propose LAPSE, a new methodology to concurrently reduce the energy consumed by an OLED display and enhance the contrast of the displayed image, that relies on image-specific pixel-by-pixel transformations. Unlike previous approaches, LAPSE focuses specifically on reducing the overheads required to implement the transformation at runtime. To this end, we propose a transformation that can be executed in real time, either in software, with low time overhead, or in a hardware accelerator with a small area and low energy budget. Despite the significant reduction in complexity, we obtain comparable results to those achieved with more complex approaches in terms of power saving and image quality. Moreover, our method allows to easily explore the full quality-versus-power tradeoff by acting on a few basic parameters; thus, it enables the runtime selection among multiple display quality settings, according to the status of the system.

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