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1.
Multimed Tools Appl ; 81(18): 25029-25050, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-35342329

RESUMO

Training supervised machine learning models like deep learning requires high-quality labelled datasets that contain enough samples from various categories and specific cases. The Data as a Service (DaaS) can provide this high-quality data for training efficient machine learning models. However, the issue of privacy can minimize the participation of the data owners in DaaS provision. In this paper, a blockchain-based decentralized federated learning framework for secure, scalable, and privacy-preserving computational intelligence, called Decentralized Computational Intelligence as a Service (DCIaaS), is proposed. The proposed framework is able to improve data quality, computational intelligence quality, data equality, and computational intelligence equality for complex machine learning tasks. The proposed framework uses the blockchain network for secure decentralized transfer and sharing of data and machine learning models on the cloud. As a case study for multimedia applications, the performance of DCIaaS framework for biomedical image classification and hazardous litter management is analysed. Experimental results show an increase in the accuracy of the models trained using the proposed framework compared to decentralized training. The proposed framework addresses the issue of privacy-preserving in DaaS using the distributed ledger technology and acts as a platform for crowdsourcing the training process of machine learning models.

2.
Multimed Tools Appl ; 81(16): 22185-22214, 2022.
Artigo em Inglês | MEDLINE | ID: mdl-35002472

RESUMO

Smart city management is facing a new challenge from littered face masks during COVID-19 pandemic. Addressing the issues of detection and collection of this hazardous waste that is littered in public spaces and outside the controlled environments, usually associated with biomedical waste, is urgent for the safety of the communities around the world. Manual management of this waste is beyond the capabilities of governments worldwide as the geospatial scale of littering is very high and also because this contaminated litter is a health and safety issue for the waste collectors. In this paper, an autonomous biomedical waste management framework that uses edge surveillance and location intelligence for detection of the littered face masks and predictive modelling for emergency response to this problem is proposed. In this research a novel dataset of littered face masks in various conditions and environments is collected. Then, a new deep neural network architecture for rapid detection of discarded face masks on the video surveillance edge nodes is proposed. Furthermore, a location intelligence model for prediction of the areas with higher probability of hazardous litter in the smart city is presented. Experimental results show that the accuracy of the proposed model for detection of littered face masks in various environments is 96%, while the speed of processing is ten times faster than comparable models. The proposed framework can help authorities to plan for timely emergency response to scattering of hazardous material in residential environments.

3.
New Gener Comput ; 39(3-4): 677-700, 2021.
Artigo em Inglês | MEDLINE | ID: mdl-34219860

RESUMO

The COVID-19 pandemic resulted in a significant increase in the workload for the emergency systems and healthcare providers all around the world. The emergency systems are dealing with large number of patients in various stages of deteriorating conditions which require significant medical expertise for accurate and rapid diagnosis and treatment. This issue will become more prominent in places with lack of medical experts and state-of-the-art clinical equipment, especially in developing countries. The machine intelligence aided medical diagnosis systems can provide rapid, dependable, autonomous, and low-cost solutions for medical diagnosis in emergency conditions. In this paper, a privacy-preserving computer-aided diagnosis (CAD) framework, called Decentralized deep Emergency response Intelligence (D-EI), which provides secure machine learning based medical diagnosis on the cloud is proposed. The proposed framework provides a blockchain based decentralized machine learning solution to aid the health providers with medical diagnosis in emergency conditions. The D-EI uses blockchain smart contracts to train the CAD machine learning models using all the data on the medical cloud while preserving the privacy of patients' records. Using the proposed framework, the data of each patient helps to increase the overall accuracy of the CAD model by balancing the diagnosis datasets with minority classes and special cases. As a case study, the D-EI is demonstrated as a solution for COVID-19 diagnosis. The D-EI framework can help in pandemic management by providing rapid and accurate diagnosis in overwhelming medical workload conditions.

4.
J Comput Chem ; 32(4): 555-67, 2011 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-20806262

RESUMO

Diabetes mellitus is a chronic metabolic disease involving the failure to regulate glucose blood levels in the body and has been linked with numerous detrimental complications. Studies have shown that these complications can be linked to the activities of aldose reductase (AR), an enzyme of the polyol pathway. Flavonoids have been identified as good AR inhibitors (ARIs) and are also strong antioxidants with radical scavenging (RS) activity. As such, flavonoids show potential to become a better class of ARIs because they are able to concurrently address the oxidative stress issue. In this article, we carried out quantitative structure-activity relationship analysis of flavones and flavonols (members of flavonoid family) using artificial neural networks. Three computer experiments were conducted to study the influence of hydrogen (H), hydroxyl (-OH), and methoxyl (-CH(3)) functional groups on eight substitution sites of the lead flavone molecule and to predict potential ARIs. Of 6561 possible flavones and flavonols, in experiment 1, we predicted 69 potent ARIs, and in experiment 2, we predicted 346 compounds with strong RS activity. In experiment 3, we combined these results to find overlapping compounds with both strong AR inhibition and RS activity and we are able to predict 10 potent compounds with strong AR inhibition (IC(50) < 0.3 µM) and RS activity (IC(25) < 1.0 µM). These 10 compounds show promise of being good therapeutic agents in the prevention of diabetic complications and is suggested to undergo further wet bench experimentation to prove their potency.


Assuntos
Aldeído Redutase/antagonistas & inibidores , Antioxidantes/química , Antioxidantes/farmacologia , Diabetes Mellitus/tratamento farmacológico , Desenho de Fármacos , Flavonoides/química , Flavonoides/farmacologia , Aldeído Redutase/metabolismo , Flavonas/química , Flavonas/farmacologia , Flavonóis/química , Flavonóis/farmacologia , Humanos , Redes Neurais de Computação , Relação Quantitativa Estrutura-Atividade
5.
Bioinformatics ; 26(9): 1219-24, 2010 May 01.
Artigo em Inglês | MEDLINE | ID: mdl-20215462

RESUMO

MOTIVATION: Clinical diseases are characterized by distinct phenotypes. To identify disease genes is to elucidate the gene-phenotype relationships. Mutations in functionally related genes may result in similar phenotypes. It is reasonable to predict disease-causing genes by integrating phenotypic data and genomic data. Some genetic diseases are genetically or phenotypically similar. They may share the common pathogenetic mechanisms. Identifying the relationship between diseases will facilitate better understanding of the pathogenetic mechanism of diseases. RESULTS: In this article, we constructed a heterogeneous network by connecting the gene network and phenotype network using the phenotype-gene relationship information from the OMIM database. We extended the random walk with restart algorithm to the heterogeneous network. The algorithm prioritizes the genes and phenotypes simultaneously. We use leave-one-out cross-validation to evaluate the ability of finding the gene-phenotype relationship. Results showed improved performance than previous works. We also used the algorithm to disclose hidden disease associations that cannot be found by gene network or phenotype network alone. We identified 18 hidden disease associations, most of which were supported by literature evidence. AVAILABILITY: The MATLAB code of the program is available at http://www3.ntu.edu.sg/home/aspatra/research/Yongjin_BI2010.zip.


Assuntos
Biologia Computacional/métodos , Estudo de Associação Genômica Ampla , Algoritmos , Doença de Alzheimer/genética , Redes Reguladoras de Genes , Genômica , Genótipo , Humanos , Modelos Biológicos , Modelos Genéticos , Modelos Estatísticos , Mutação , Fenótipo
6.
BMC Bioinformatics ; 11 Suppl 1: S20, 2010 Jan 18.
Artigo em Inglês | MEDLINE | ID: mdl-20122192

RESUMO

BACKGROUND: Identifying disease gene from a list of candidate genes is an important task in bioinformatics. The main strategy is to prioritize candidate genes based on their similarity to known disease genes. Most of existing gene prioritization methods access only one genomic data source, which is noisy and incomplete. Thus, there is a need for the integration of multiple data sources containing different information. RESULTS: In this paper, we proposed a combination strategy, called discounted rating system (DRS). We performed leave one out cross validation to compare it with N-dimensional order statistics (NDOS) used in Endeavour. Results showed that the AUC (Area Under the Curve) values achieved by DRS were comparable with NDOS on most of the disease families. But DRS worked much faster than NDOS, especially when the number of data sources increases. When there are 100 candidate genes and 20 data sources, DRS works more than 180 times faster than NDOS. In the framework of DRS, we give different weights for different data sources. The weighted DRS achieved significantly higher AUC values than NDOS. CONCLUSION: The proposed DRS algorithm is a powerful and effective framework for candidate gene prioritization. If weights of different data sources are proper given, the DRS algorithm will perform better.


Assuntos
Algoritmos , Doença/genética , Biologia Computacional , Coleta de Dados , Bases de Dados Genéticas , Perfilação da Expressão Gênica/métodos , Reconhecimento Automatizado de Padrão
7.
J Comput Chem ; 30(15): 2494-508, 2009 Nov 30.
Artigo em Inglês | MEDLINE | ID: mdl-19373836

RESUMO

In this article, in the first part, we propose an artificial neural network-based intelligent technique to determine the quantitative structure-activity relationship (QSAR) among known aldose reductase inhibitors (ARIs) for diabetes mellitus using two molecular descriptors, i.e., the electronegativity and molar volume of functional groups present in the main ARI lead structure. We have shown that the multilayer perceptron-based model is capable of determining the QSAR quite satisfactorily, with high R-value. Usually, the design of potent ARIs requires the use of complex computer docking and quantum mechanical (QM) steps involving excessive time and human judgement. In the second part of this article, to reduce the design cycle of potent ARIs, we propose a novel ANN technique to eliminate the computer docking and QM steps, to predict the total score. The MLP-based QSAR models obtained in the first part are used to predict the potent ARIs, using the experimental data reported by Hu et al. (J Mol Graph Mod 2006, 24, 244). The proposed ANN-based model can predict the total score with an R-value of 0.88, which indicates that there exists a close match between the predicted and experimental total scores. Using the ANN model, we obtained 71 potent ARIs out of 6.25 million new ARI compounds created by substituting different functional groups at substituting sites of main lead structure of known ARI. Finally, using high bioactivity relationship and total score values, we determined four potential ARIs out of these 71 compounds. Interestingly, these four ARIs include the two potent ARIs reported by Hu et al. (J Mol Graph Mod 2006, 24, 244) who obtained these through the complex computer docking and QM steps. This fact indicates the effectiveness of our proposed ANN-based technique. We suggest these four compounds to be the most promising candidates for ARIs to prevent the diabetic complications and further recommend for wet bench experiments to find their potential against AR in vitro and in vivo.


Assuntos
Aldeído Redutase/química , Diabetes Mellitus/enzimologia , Inibidores Enzimáticos/química , Redes Neurais de Computação , Relação Quantitativa Estrutura-Atividade , Aldeído Redutase/antagonistas & inibidores , Aldeído Redutase/metabolismo , Inibidores Enzimáticos/farmacologia
8.
ISA Trans ; 44(2): 165-76, 2005 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-15868856

RESUMO

Usually the environmental parameters influence the sensor characteristics in a nonlinear manner. Therefore obtaining correct readout from a sensor under varying environmental conditions is a complex problem. In this paper we propose a neural network (NN)-based interface framework to automatically compensate for the nonlinear influence of the environmental temperature and the nonlinear-response characteristics of a capacitive pressure sensor (CPS) to provide correct readout. With extensive simulation studies we have shown that the NN-based inverse model of the CPS can estimate the applied pressure with a maximum error of +/- 1.0% for a wide temperature variation from 0 to 250 degrees C. A microcontroller unit-based implementation scheme is also proposed.


Assuntos
Algoritmos , Eletrônica Médica , Monitoramento Ambiental/instrumentação , Desenho de Equipamento/métodos , Análise de Falha de Equipamento/métodos , Modelos Teóricos , Transdutores , Calibragem , Simulação por Computador , Meio Ambiente , Monitoramento Ambiental/métodos , Dinâmica não Linear
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