Sampling forests with terrestrial laser scanning.

BACKGROUND AND AIMS: Terrestrial laser scanners (TLSs) have successfully captured various properties of individual trees and have potential to further increase the quality and efficiency of forest surveys. However, TLSs are limited to line of sight observations, and forests are complex structural environments that can occlude TLS beams and thereby cause incomplete TLS samples. We evaluate the prevalence and sources of occlusion that limit line of sight to forest stems for TLS scans, assess the impacts of TLS sample incompleteness, and evaluate sampling strategies and data analysis techniques aimed at improving sample quality and representativeness. METHODS: We use a large number of TLS scans (761), taken across a 255 650-m2 area of forest with detailed field survey data: the Harvard Forest Global Earth Observatory (ForestGEO) (MA, USA). Sets of TLS returns are matched to stem positions in the field surveys to derive TLS-observed stem sets, which are compared with two additional stem sets derived solely from the field survey data: a set of stems within a fixed range from the TLS and a set of stems based on 2-D modelling of line of sight. Stem counts and densities are compared between the stem sets, and four alternative derivations of area to correct stem densities for the effects of occlusion are evaluated. Representation of diameter at breast height and species, drawn from the field survey data, are also compared between the stem sets. KEY RESULTS: Occlusion from non-stem sources was the major influence on TLS line of sight. Transect and point TLS samples demonstrated better representativeness of some stem properties than did plots. Deriving sampled area from TLS scans improved estimates of stem density. CONCLUSIONS: TLS sampling efforts should consider alternative sampling strategies and move towards in-progress assessment of sample quality and dynamic adaptation of sampling.

Characterization of FIREFLY, an Imaging Spectrometer Designed for Remote Sensing of Solar Induced Fluorescence.

Solar induced fluorescence (SIF) is an ecological variable of interest to remote sensing retrievals, as it is directly related to vegetation composition and condition. FIREFLY (fluorescence imaging of red and far-red light yield) is a high performance spectrometer for estimating SIF. FIREFLY was flown in conjunction with NASA Goddard's lidar, hyperspectral, and thermal (G-LiHT) instrument package in 2017, as a technology demonstration for airborne retrievals of SIF. Attributes of FIREFLY relevant to SIF retrieval, including detector response and linearity; full-width at half maximum (FWHM); stray light; dark current; and shot noise were characterized with a combination of observations from Goddard's laser for absolute measurement of radiance calibration facility; an integrating sphere; controlled acquisitions of known targets; in-flight acquisitions; and forward modelling. FWHM, stray light, and dark current were found to be of acceptable magnitude, and characterized to within acceptable limits for SIF retrieval. FIREFLY observations were found to represent oxygen absorption features, along with a large number of solar absorption features. Shot noise was acceptable for direct SIF retrievals at native resolution, but indirect SIF retrievals from absorption features would require spatial aggregation, or repeated observations of targets.

Classifying ecosystems with metaproperties from terrestrial laser scanner data.

In this study, we introduce metaproperty analysis of terrestrial laser scanner (TLS) data, and demonstrate its application through several ecological classification problems. Metaproperty analysis considers pulse level and spatial metrics derived from the hundreds of thousands to millions of lidar pulses present in a single scan from a typical contemporary instrument. In such large aggregations, properties of the populations of lidar data reflect attributes of the underlying ecological conditions of the ecosystems.In this study, we provide the Metaproperty Classification Model to employ TLS metaproperty analysis for classification problems in ecology. We applied this to a proof-of-concept study, which classified 88 scans from rooms and forests with 100% accuracy, to serve as a template.We then applied the Metaproperty Classification Model in earnest, to separate scans from temperate and tropical forests with 97.09% accuracy (N = 224), and to classify scans from inland and coastal tropical rainforests with 84.07% accuracy (N = 270).The results demonstrate the potential for metaproperty analysis to identify subtle and important ecosystem conditions, including diseases and anthropogenic disturbances. Metaproperty analysis serves as an augmentation to contemporary object reconstruction applications of TLS in ecology, and can characterize regional heterogeneity.

Bounding uncertainty in volumetric geometric models for terrestrial lidar observations of ecosystems.

Volumetric models with known biases are shown to provide bounds for the uncertainty in estimations of volume for ecologically interesting objects, observed with a terrestrial laser scanner (TLS) instrument. Bounding cuboids, three-dimensional convex hull polygons, voxels, the Outer Hull Model and Square Based Columns (SBCs) are considered for their ability to estimate the volume of temperate and tropical trees, as well as geomorphological features such as bluffs and saltmarsh creeks. For temperate trees, supplementary geometric models are evaluated for their ability to bound the uncertainty in cylinder-based reconstructions, finding that coarser volumetric methods do not currently constrain volume meaningfully, but may be helpful with further refinement, or in hybridized models. Three-dimensional convex hull polygons consistently overestimate object volume, and SBCs consistently underestimate volume. Voxel estimations vary in their bias, due to the point density of the TLS data, and occlusion, particularly in trees. The response of the models to parametrization is analysed, observing unexpected trends in the SBC estimates for the drumlin dataset. Establishing that this result is due to the resolution of the TLS observations being insufficient to support the resolution of the geometric model, it is suggested that geometric models with predictable outcomes can also highlight data quality issues when they produce illogical results.

Radiometric Calibration of a Dual-Wavelength, Full-Waveform Terrestrial Lidar.

Radiometric calibration of the Dual-Wavelength Echidna(®) Lidar (DWEL), a full-waveform terrestrial laser scanner with two simultaneously-pulsing infrared lasers at 1064 nm and 1548 nm, provides accurate dual-wavelength apparent reflectance (ρ(app)), a physically-defined value that is related to the radiative and structural characteristics of scanned targets and independent of range and instrument optics and electronics. The errors of ρ(app) are 8.1% for 1064 nm and 6.4% for 1548 nm. A sensitivity analysis shows that ρ(app) error is dominated by range errors at near ranges, but by lidar intensity errors at far ranges. Our semi-empirical model for radiometric calibration combines a generalized logistic function to explicitly model telescopic effects due to defocusing of return signals at near range with a negative exponential function to model the fall-off of return intensity with range. Accurate values of ρ(app) from the radiometric calibration improve the quantification of vegetation structure, facilitate the comparison and coupling of lidar datasets from different instruments, campaigns or wavelengths and advance the utilization of bi- and multi-spectral information added to 3D scans by novel spectral lidars.