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1.
Orthop J Sports Med ; 9(11): 23259671211028167, 2021 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-34820457

RESUMO

BACKGROUND: Trochlear dysplasia (TD) is a recognized condition that can become a risk factor for patellofemoral instability. A modified Albee osteotomy procedure using a trapezoidal-shaped wedge to elevate the lateral wall of the trochlea can be used with the goal of preventing further dislocation. However, outcomes studies are lacking, and scores on patient-reported outcome measures (PROMs) are largely unknown. PURPOSE/HYPOTHESIS: The purpose of this study was to identify PROM scores for the Kujala Anterior Knee Pain Scale (AKPS), International Knee Documentation Committee (IKDC), Activity Rating System (ARS), and 100-point pain visual analog scale (VAS) for patients having undergone the modified Albee osteotomy. The hypothesis was that patients will have acceptable pain and function at mid- to long-term follow-up. STUDY DESIGN: Case series; Level of evidence, 4. METHODS: From 1999 to 2017, a total of 46 consecutive patients (49 knees) underwent a modified Albee procedure by a single surgeon at a single health care system. These 46 patients were contacted and asked to complete the AKPS, IKDC, ARS, and pain VAS. Additional demographic information was obtained via chart review. Frequencies and rates for categorical variables and means and standard deviations for continuous variables of the demographics and PROM scores were calculated. RESULTS: PROM scores were obtained in 28 (30 knees; 61%) of the 46 patients. At minimum follow-up of 82 months, the mean scores were 78.5 ± 18.2 for AKPS, 61.2 ± 11.4 for IKDC, 5.2 ± 5.3 for ARS, and 24.4 ± 28.7 for VAS pain. Notably, only 1 of the 28 patients reported a patellofemoral dislocation since surgery, and this was an isolated incident without further instability. CONCLUSION: A modified Albee trochlear osteotomy can be a successful adjunctive procedure to prevent recurrent patellar dislocations in patients with mild TD. However, owing to the loss of one-third of patient follow-up scores and the absence of baseline function scores in this study, the procedure deserves further investigation as a way to address a particularly difficult dilemma for a select subset of patients with patellofemoral instability.

2.
Am J Sports Med ; 47(11): 2699-2703, 2019 09.
Artigo em Inglês | MEDLINE | ID: mdl-31386563

RESUMO

BACKGROUND: A variety of methods exist for fixation during ulnar collateral ligament (UCL) reconstruction on the ulna for the overhead throwing athlete. Current biomechanical evidence suggests that cortical button fixation may fail at a higher load and under more cycles than interference screw fixation alone, while also minimizing the risk of fracture. A safe angle for placement of this cortical button has not yet been determined. PURPOSE: To define a safe angle for cortical button deployment during UCL reconstruction to avoid violation of the proximal radioulnar joint (PRUJ). STUDY DESIGN: Descriptive laboratory study. METHODS: Measurements on 100 cadaveric ulna bones, 50 women and 50 men, were obtained referencing the entry point for ulnar fixation, which is 1 cm distal to the ulnar humeral joint line along the medial UCL ridge. Ulnar width at the entry point and distance to the PRUJ were obtained to calculate safe distal angulation, while distance from the entry point to the posterior ulnar crest ulnarly and distance from the PRUJ to the posterior ulnar crest radially were obtained to calculate safe posterior angulation. Ten bony measurements on the same group of specimens were performed by 3 authors to establish an interobserver reliability. Means, quartiles, and outliers were obtained for the calculated angles. Finally, recommended angles of entry were determined to be approximately 1 interquartile range above the upper limit. RESULTS: The mean distal angle of entry that was obtained was 11.32° (SD, ±4.80°; 95% CI, 10.37°-12.27°; P < .001). Three upper limit outliers were discovered: 24.20°, 23.4°, and 21.1°. The mean posterior angle of entry was 40.44° (SD, ±6.18°; 95% CI, 39.22°-41.67°; P < .001). There were no outliers for the posterior angle of entry. Interobserver reliabilities were strong for the 4 measurements. CONCLUSION: To be safely outside of the PRUJ utilizing a cortical button construct, we recommend 30° distal angulation and 60° posterior angulation for ulnar fixation during UCL reconstruction. Both parameters are 1 quartile above the highest calculated angle of entry. CLINICAL RELEVANCE: These data define safe parameters for distal fixation during UCL reconstruction and highlight a clear entry point for reference.


Assuntos
Ligamento Colateral Ulnar/cirurgia , Articulação do Cotovelo/cirurgia , Reconstrução do Ligamento Colateral Ulnar/métodos , Adolescente , Adulto , Parafusos Ósseos , Cadáver , Ligamentos Colaterais/cirurgia , Feminino , Antebraço , Humanos , Masculino , Pessoa de Meia-Idade , Amplitude de Movimento Articular , Reprodutibilidade dos Testes , Ulna/cirurgia , Adulto Jovem
3.
JBJS Essent Surg Tech ; 8(1): e6, 2018 Mar 28.
Artigo em Inglês | MEDLINE | ID: mdl-30233978

RESUMO

BACKGROUND: The true prevalence of displaced tibial-sided avulsion injuries of the posterior cruciate ligament (PCL; Video 1) is unknown, and the majority of data regarding management has been published in areas other than the Western world, such as China and India (perhaps due to the higher prevalence of two-wheeler motorcycle accidents in these areas). Despite the rarity of data, a better understanding of the approach, fixation techniques, and outcomes is necessary to provide quality patient care. These injuries generally require surgical intervention as nonoperative management leads to complications-specifically, knee arthrofibrosis1,2. There is no consensus regarding the optimal surgical approach for these injuries. A recent systematic review demonstrated that both open and arthroscopic surgical treatment provide satisfactory complication rates and outcomes in the majority of cases3. However, the arthroscopic approach can be performed by only a highly skilled arthroscopist; thus, in this article we focus on the open approach to reach a broader audience of capable surgeons. DESCRIPTION: The principal steps for open reduction and internal fixation of the tibial avulsion fracture include the following:Place the patient in a prone position and utilize a curvilinear L-shaped incision with the longitudinal portion over the medial head of the gastrocnemius muscle and the transverse portion starting distal to the joint line and extending laterally past the midline.Develop the interval between the semimembranosus and medial gastrocnemius muscles, as originally described by Burks and Schaffer4. Lateral retraction of the gastrocnemius muscle exposes the posterior aspect of the capsule, allowing for a vertical capsular incision to adequately visualize the avulsed osseous fragment.Prepare the osseous bed and remove hematoma and/or debris.Reduce the avulsed fragment and obtain provisional fixation with Kirschner wires.Confirm reduction under fluoroscopy with emphasis on sagittal plane alignment.Obtain definitive fixation with the method dictated by the fracture orientation. Options include screw(s) with or without a washer, sutures, Kirschner wires, staples, and toothed plates2,5-7. ALTERNATIVES: An arthroscopic approach can be performed, with results that are similar to those of an open procedure, but considerable expertise is required to perform this procedure arthroscopically. Nonsurgical management is not recommended as it frequently leads to loss of knee motion. RATIONALE: The exact operative indications for PCL injuries remain in question, but we believe that displaced tibial avulsion injuries at the PCL attachment always require operative treatment.

4.
Clin Exp Immunol ; 193(2): 160-166, 2018 08.
Artigo em Inglês | MEDLINE | ID: mdl-29698559

RESUMO

The role of helminth treatment in autoimmune diseases is growing constantly. Systemic lupus erythematosus (SLE) is a multi-system autoimmune disease with challenging treatment options. Tuftsin-phosphorylcholine (TPC) is a novel helminth-based compound that modulates the host immune network. This study was conducted to evaluate the potential value of TPC in ameliorating lupus nephritis in a murine model and specifically to compare the efficacy of TPC to the existing first-line therapy for SLE: corticosteroids (methylprednisolone). Lupus-prone NZBxW/F1 mice were treated with TPC (5 µg/mouse), methylprednisolone (MP; 5 mg/body weight) or phosphate-buffered saline (PBS) (control) three times per week once glomerulonephritis, defined as proteinuria of grade > 100 mg/dl, was established. Levels of anti-dsDNA autoantibodies were evaluated by enzyme-linked immunosorbent assay (ELISA), splenic cytokines were measured in vitro and the kidney microscopy was analysed following staining. TPC and MP treatments improved lupus nephritis significantly and prolonged survival in NZBxW/F1 mice. TPC-treated mice showed a significantly decreased level of proteinuria (P < 0·001) and anti-dsDNA antibodies (P < 0·001) compared to PBS-treated mice. Moreover, TPC and MP inhibited the production of the proinflammatory cytokines interferon IFN-γ, interleukin IL-1ß and IL-6 (P < 0·001) and enhanced expression of the anti-inflammatory cytokine IL-10 (P < 0·001). Finally, microscopy analysis of the kidneys demonstrated that TPC-treated mice maintained normal structure equally to MP-treated mice. These data indicate that the small molecule named TPC hinders lupus development in genetically lupus-prone mice equally to methylprednisolone in most of the cases. Hence, TCP may be employed as a therapeutic potential for lupus nephritis.


Assuntos
Anti-Inflamatórios/uso terapêutico , Helmintos/imunologia , Rim/patologia , Lúpus Eritematoso Sistêmico/tratamento farmacológico , Nefrite Lúpica/tratamento farmacológico , Fosforilcolina/análogos & derivados , Fosforilcolina/uso terapêutico , Tuftsina/uso terapêutico , Animais , Anticorpos Antinucleares/sangue , Citocinas/metabolismo , Modelos Animais de Doenças , Combinação de Medicamentos , Feminino , Humanos , Mediadores da Inflamação/metabolismo , Rim/efeitos dos fármacos , Metilprednisolona/uso terapêutico , Camundongos , Camundongos Endogâmicos NZB , Fosforilcolina/química , Tuftsina/química
5.
Am J Sports Med ; 46(3): 734-742, 2018 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-28437619

RESUMO

BACKGROUND: Tibial-sided avulsion injuries of the posterior cruciate ligament (PCL) generally require surgical intervention. No consensus exists concerning the optimal surgical treatment approach for these injuries. PURPOSE: To perform a systematic review investigating the open and arthroscopic surgical treatment modalities, outcomes, and complications of PCL tibial-sided bony avulsions. STUDY DESIGN: Systematic review; Level of evidence, 4. METHODS: The authors performed a systematic review of the literature utilizing PubMed and EMBASE from 1975 to present outlining open versus arthroscopic surgical repair of PCL bony avulsion injuries and comparing subjective and objective postoperative patient-reported outcomes, including Tegner, IKDC (International Knee Documentation Committee), and Lysholm scoring systems, as well as rates of patient complications. The quest was performed in June 2016, and searched terms included posterior cruciate ligament, PCL, bony, avulsion(s), tibial-sided, open, and arthroscopic. Inclusion criteria included English-language studies involving surgical fixation strategies for PCL tibial-sided bony avulsions. Exclusion criteria included non-English language, case studies/case series, and subject matter not pertaining to PCL bony avulsions. RESULTS: Twenty-eight articles comprising 637 patients met the criteria and were included in the final review. PCL injuries with a tibial-sided avulsion were the result of motor vehicle accidents in 68.4% of patients, with 59.0% of these injuries resulting from motorcycle accidents. The arthroscopic group had better IKDC grade A scores (78.9%), indicating a normal knee postoperatively, as compared with the open group (65.9%). The postoperative Lysholm scores were similar between the groups, with a mean of 95.0 in the arthroscopic group and 92.8 in the open group. The arthroscopic group also reported 100% return to preinjury level of activity, compared with 86.2% in the open group. The most common complication in both groups was arthrofibrosis, which was reported more often in the arthroscopic group (0%-35%) versus the open treatment group (0%-25%). CONCLUSION: In patients with displaced tibial-sided PCL avulsion fractures treated operatively, surgical approaches render similar outcomes and risks. While the arthroscopic group had somewhat higher subjective and objective knee outcome scores, it demonstrated a slightly higher rate of arthrofibrosis. The clear advantage of the arthroscopic approach is that concomitant intra-articular injuries seen on preoperative magnetic resonance imaging, such as meniscal tears or osteochondral loose fragments, can be addressed at the time of the index operation.


Assuntos
Artroscopia/métodos , Traumatismos do Joelho/cirurgia , Ligamento Cruzado Posterior/lesões , Humanos , Articulação do Joelho/cirurgia , Ligamento Cruzado Posterior/cirurgia , Tíbia , Resultado do Tratamento
6.
Afr Health Sci ; 11 Suppl 1: S77-81, 2011 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-22135649

RESUMO

BACKGROUND: Youths in sub-Saharan Africa (SSA) account for a large burden of the global HIV/STI crises. As such, strategies directed at promoting behavioral modifications would be critical to reducing the prevalence of risky sexual behaviors among high risk adolescents in post-conflict environments. OBJECTIVES: This study describes a condom promotion strategy to prevent HIV/STIs among highly vulnerable urban youth in a post-conflict, resource-constrained environment via the provision of both male and female condoms to nontraditional venues like music and photo shops, ice cream parlors, money exchange centers and beauty salons. METHODS: Community members in the designated catchment areas volunteered their services and the use of their small businesses to support this endeavor. RESULTS: In this paper, we describe the condom promotion strategy and its implications within the context of a community-based participatory social marketing program to prevent risky sexual behaviors among highly vulnerable urban youth in a post-conflict country. CONCLUSION: We postulate that this approach may likely increase condom use among urban youth in Monrovia, the capital city of Liberia.


Assuntos
Preservativos/estatística & dados numéricos , Infecções por HIV/prevenção & controle , Marketing Social , Adolescente , Comércio , Feminino , Promoção da Saúde/métodos , Humanos , Libéria , Masculino , Infecções Sexualmente Transmissíveis/prevenção & controle , Condições Sociais , População Urbana
7.
J Chiropr Educ ; 23(1): 40-6, 2009.
Artigo em Inglês | MEDLINE | ID: mdl-19390682

RESUMO

This article provides information regarding the introduction of virtual education into classroom instruction, wherein a method of classroom instruction was developed with the use of a computer, digital camera, and various software programs. This approach simplified testing procedures, thus reducing institutional costs substantially by easing the demand for manpower, and seemed to improve average grade performance. Organized files with hundreds of digital pictures have created a range of instructor resources. Much of the new course materials were organized onto compact disks to complement course notes. Customizing presentations with digital technology holds potential benefits for students, instructors and the institution.

8.
J Clin Microbiol ; 40(11): 4295-7, 2002 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-12409413

RESUMO

We have developed a rapid and easy to perform fluorescence in situ hybridization test that allows specific identification of trypanosomes from the subgenus Trypanozoon, using peptide nucleic acid probes. Probes were designed to target subgenus-specific sequences on the multiple-copy 18S rRNA, greatly facilitating the detection of a single trypanosome.


Assuntos
Hibridização in Situ Fluorescente , Sondas de Ácido Nucleico , Ácidos Nucleicos Peptídicos , Trypanosoma/classificação , Trypanosoma/isolamento & purificação , Animais , Sangue/parasitologia , Bovinos , DNA Ribossômico/análise , Humanos , RNA Ribossômico 18S/genética , Trypanosoma/genética , Tripanossomíase Africana/parasitologia , Tripanossomíase Africana/veterinária
9.
J Microbiol Methods ; 47(3): 281-92, 2001 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-11714518

RESUMO

A standardized fluorescent in situ hybridization (FISH) method using Peptide Nucleic Acid (PNA) probes for analysis of gram-negative and gram-positive bacteria, as well as yeast, has been developed. Fluorescently labeled PNA probes targeting specific rRNA sequences of Escherichia coli, Pseudomonas aeruginosa, Staphyloccocus aureus, Salmonella were designed, as well as PNA probes targeting eubacteria and eucarya. These PNA probes were evaluated by PNA FISH using 27 bacterial and 1 yeast species, representing both phylogenetically closely related species, as well as species important to both clinical and industrial settings. The S. aureus and P. aeruginosa PNA probes did not cross react with any of the organisms tested, whereas the E. coli PNA probe, as expected from sequence data, also detected Shigella species. The Salmonella PNA probe reacted with all of the 13 Salmonella strains, representing the 7 subspecies of Salmonella, however, it is also complementary to a few other bacterial species. The eubacteria- and eucarya-specific PNA probes detected all bacterial species and one yeast species, respectively. The general applicability of the PNA FISH method made simultaneous identification of multiple species, both gram-negative and gram-positive, in a mixed population an attractive possibility never accomplished using DNA probes. Four color images using differently labeled PNA probes showed simultaneous identification of E. coli, P. aeruginosa, S. aureus and Salmonella, thereby demonstrating the potential of multiplex FISH for various diagnostic applications within both clinical and industrial microbiology.


Assuntos
Bactérias Gram-Negativas/genética , Bactérias Gram-Positivas/genética , Hibridização in Situ Fluorescente/métodos , Ácidos Nucleicos Peptídicos , Leveduras/genética , Bactérias Gram-Negativas/isolamento & purificação , Bactérias Gram-Positivas/isolamento & purificação , Técnicas Microbiológicas , Sondas de Oligonucleotídeos , RNA Ribossômico/análise , RNA Ribossômico/genética , Sensibilidade e Especificidade , Leveduras/isolamento & purificação
10.
Appl Environ Microbiol ; 67(2): 938-41, 2001 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-11157265

RESUMO

A new fluorescence in situ hybridization method using peptide nucleic acid (PNA) probes for identification of Brettanomyces is described. The test is based on fluorescein-labeled PNA probes targeting a species-specific sequence of the rRNA of Dekkera bruxellensis. The PNA probes were applied to smears of colonies, and results were interpreted by fluorescence microscopy. The results obtained from testing 127 different yeast strains, including 78 Brettanomyces isolates from wine, show that the spoilage organism Brettanomyces belongs to the species D. bruxellensis and that the new method is able to identify Brettanomyces (D. bruxellensis) with 100% sensitivity and 100% specificity.


Assuntos
Hibridização in Situ Fluorescente/métodos , Sondas de Ácido Nucleico/genética , Ácidos Nucleicos Peptídicos/genética , Vinho/microbiologia , Leveduras/classificação , Sequência de Bases , DNA Ribossômico/análise , Dados de Sequência Molecular , RNA Ribossômico/genética , Especificidade da Espécie , Leveduras/genética
11.
J Appl Microbiol ; 90(2): 180-9, 2001 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-11168720

RESUMO

AIMS: A method for rapid and simultaneous detection, identification and enumeration of specific micro-organisms using Peptide Nucleic Acid (PNA) probes is presented. METHODS AND RESULTS: The method is based on a membrane filtration technique. The membrane filter was incubated for a short period of time. The microcolonies were analysed by in situ hybridization, using peroxidase-labelled PNA probes targeting a species-specific rRNA sequence, and visualized by a chemiluminescent reaction. Microcolonies were observed as small spots of light on film, thereby providing simultaneous detection, identification and enumeration. The method showed 95-100% correlation to standard plate counts along with definitive identification due to the specificity of the probe. CONCLUSION: Using the same protocol, results were generated approximately three times faster than culture methods for Gram-positive and -negative bacterial species and yeast species. SIGNIFICANCE AND IMPACT OF THE STUDY: The method is an improvement on the current membrane filtration technique, providing rapid determination of the level of specific pathogens, spoilage or indicator micro-organisms.


Assuntos
Bactérias , Hibridização In Situ/métodos , Filtros Microporos/microbiologia , Ácidos Nucleicos Peptídicos/genética , Leveduras , Bactérias/classificação , Bactérias/crescimento & desenvolvimento , Bactérias/isolamento & purificação , Contagem de Colônia Microbiana , Meios de Cultura , Filtração/instrumentação , Filtração/métodos , Medições Luminescentes , Sondas Moleculares/genética , Peroxidase/metabolismo , Especificidade da Espécie , Raios X , Leveduras/classificação , Leveduras/crescimento & desenvolvimento , Leveduras/isolamento & purificação
12.
Appl Environ Microbiol ; 67(1): 142-7, 2001 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-11133438

RESUMO

A new chemiluminescent in situ hybridization (CISH) method provides simultaneous detection, identification, and enumeration of culturable Escherichia coli cells in 100 ml of municipal water within one working day. Following filtration and 5 h of growth on tryptic soy agar at 35 degrees C, individual microcolonies of E. coli were detected directly on a 47-mm-diameter membrane filter using soybean peroxidase-labeled peptide nucleic acid (PNA) probes targeting a species-specific sequence in E. coli 16S rRNA. Within each microcolony, hybridized, peroxidase-labeled PNA probe and chemiluminescent substrate generated light which was subsequently captured on film. Thus, each spot of light represented one microcolony of E. coli. Following probe selection based on 16S ribosomal DNA (rDNA) sequence alignments and sample matrix interference, the sensitivity and specificity of the probe Eco16S07C were determined by dot hybridization to RNA of eight bacterial species. Only the rRNA of E. coli and Pseudomonas aeruginosa were detected by Eco16S07C with the latter mismatch hybridization being eliminated by a PNA blocker probe targeting P. aeruginosa 16S rRNA. The sensitivity and specificity for the detection of E. coli by PNA CISH were then determined using 8 E. coli strains and 17 other bacterial species, including closely related species. No bacterial strains other than E. coli and Shigella spp. were detected, which is in accordance with 16S rDNA sequence information. Furthermore, the enumeration of microcolonies of E. coli represented by spots of light correlated 92 to 95% with visible colonies following overnight incubation. PNA CISH employs traditional membrane filtration and culturing techniques while providing the added sensitivity and specificity of PNA probes in order to yield faster and more definitive results.


Assuntos
Escherichia coli/crescimento & desenvolvimento , Escherichia coli/isolamento & purificação , Hibridização In Situ/métodos , Microbiologia da Água , Abastecimento de Água , Sequência de Bases , Contagem de Colônia Microbiana , Meios de Cultura , DNA Ribossômico/análise , DNA Ribossômico/genética , Escherichia coli/classificação , Escherichia coli/genética , Filtração/métodos , Humanos , Medições Luminescentes , Dados de Sequência Molecular , Ácidos Nucleicos Peptídicos/genética , RNA Ribossômico 16S/genética , Sensibilidade e Especificidade , Especificidade da Espécie
13.
Curr Protoc Mol Biol ; Chapter 3: Unit3.18, 2001 May.
Artigo em Inglês | MEDLINE | ID: mdl-18265226

RESUMO

Although a number of different nonisotopic labels have been described in the literature, biotin and digoxigenin are used most frequently and are commercially available. Either label can be easily incorporated into DNA probes and be detected colorimetrically; a number of fluorochromes, as well as alkaline phosphatase and horseradish peroxidase (which produce colored precipitates) are available directly conjugated to anti-digoxigenin antibodies and to avidin. Chemiluminescent detection methods and indirect immunofluorescent techniques also provide sensitive alternatives for many molecular biology applications. This unit presents two protocols for incorporating biotinylated nucleotides into DNA probes by nick translation and random-primed synthesis. A Support Protocol describes colorimetric detection of the probes, which also serves to check the extent of nucleotide incorporation. An Alternate Protocol describes adaptations of the basic protocols for incorporation of digoxigenin-modified nucleotides.


Assuntos
Colorimetria/métodos , Sondas Moleculares , Biotina/química , Indicadores e Reagentes
14.
Curr Protoc Mol Biol ; Chapter 3: Unit3.19, 2001 May.
Artigo em Inglês | MEDLINE | ID: mdl-18265227

RESUMO

With recent advances in techniques for detecting chemiluminescent substrates, hybridization with nonisotopic rather than radiolabeled probes is becoming more common. In the Basic Protocol, nylon membranes carrying transferred nucleic acids are prepared for hybridization with biotinylated probes by UV cross-linking. This is a critical step in the procedure and the Support Protocol provides a detailed description of light-source calibration. After hybridization, the target nucleic acid is detected through a series of steps that lead to an enzyme-catalyzed light reaction. The Alternate Protocol describes chemiluminescent detection based upon antibody recognition of digoxigenin-labeled probes. For both biotinylated and digoxigenin-labeled probes, chemiluminescent detection is more sensitive than colorimetric detection and has the added advantage that the membrane can be used for multiple film exposures, then stripped and redetected with different probes.


Assuntos
Sondas Moleculares , Biotina/química , Indicadores e Reagentes , Luminescência , Raios Ultravioleta
15.
J Microbiol Methods ; 42(3): 245-53, 2000 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-11044568

RESUMO

A new chemiluminescent in situ hybridization (CISH) method that provides simultaneous detection, identification, and enumeration of Pseudomonas aeruginosa in bottled water within 1 working day has been developed. Individual micro-colonies of P. aeruginosa were detected directly on membrane filters following 5 h of growth by use of soybean peroxidase-labeled peptide nucleic acid (PNA) probes targeted to a species-specific sequence in P. aeruginosa rRNA. Within each micro-colony, reaction of the peroxidase with a chemiluminescent substrate generated light that was subsequently captured by film or with a digital camera system. Each spot of light represented one micro-colony of P. aeruginosa. Sensitivity and specificity for the identification of P. aeruginosa were 100% as determined by testing 28 P. aeruginosa strains and 17 other bacterial species that included closely related Pseudomonas species. Furthermore, the number of micro-colonies of P. aeruginosa represented by light spots correlated with counts of visible colonies following sustained growth. We conclude that PNA CISH speeds up traditional membrane filtration techniques and adds the specificity of PNA probe technology to generate fast and definitive results.


Assuntos
Técnicas Bacteriológicas , Contagem de Colônia Microbiana/métodos , Hibridização In Situ , Ácidos Nucleicos Peptídicos , Pseudomonas aeruginosa/crescimento & desenvolvimento , Pseudomonas aeruginosa/isolamento & purificação , Microbiologia da Água , Bebidas , Medições Luminescentes , Sondas de Ácido Nucleico , Sensibilidade e Especificidade , Fatores de Tempo , Abastecimento de Água
16.
Proc Natl Acad Sci U S A ; 93(25): 14670-5, 1996 Dec 10.
Artigo em Inglês | MEDLINE | ID: mdl-8962112

RESUMO

We have found that it is possible to use labeled peptide nucleic acid (PNA)-oligomers as probes in pre-gel hybridization experiments, as an alternative for Southern hybridization. In this technique, the PNA probe is hybridized to a denatured DNA sample at low ionic strength and the mixture is loaded directly on to an electrophoresis system for size separation. Ensuing gel electrophoresis separates the single-stranded DNA fragments by length. The neutral backbone of PNA allows for hybridization at low ionic strength and imparts very low mobility to excess PNA. Detection of the bound PNA is possible by direct fluorescence detection with capillary electrophoresis, or the DNA/PNA hybrids can be blotted onto a membrane and detected with standard chemiluminescent techniques. Efficient single bp discrimination was achieved routinely using both capillary and slab-gel electrophoresis.


Assuntos
Técnicas de Sonda Molecular , Hibridização de Ácido Nucleico/métodos , Southern Blotting , Peptídeos
17.
Biotechniques ; 13(4): 626-33, 1992 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-1476733

RESUMO

CircumVent thermal cycle and standard DNA sequencing protocols utilizing the cloned and highly thermostable VentR (exo-) DNA polymerase are described. The thermal cycle sequencing procedures are advantageous because they allow fast and simple semiautomation of the sequencing reaction; make possible the direct DNA sequencing of PCR products, bacterial colonies and phage plaques; require only femtomoles of template DNA; eliminate the requirement of an independent primer annealing step; remove the requirement of denatured plasmids for sequencing double-stranded templates; and use a highly thermostable DNA polymerase for sequencing through potential recalcitrant secondary structure domains and large linear double-stranded DNA templates such as lambda derivatives. More standard methods of DNA sequencing (i.e., a one-step protocol and a labeling-termination protocol) are also presented. For each protocol, alternatives for choice of label and method of labeling are presented, including the use of 5' biotinylated primers for chemiluminescent DNA sequencing and fluorinated primers for automated sequencing using the BaseStation Automated DNA Sequencer.


Assuntos
DNA Polimerase Dirigida por DNA , Análise de Sequência de DNA/métodos , Autorradiografia , DNA/análise , Eletroforese em Gel de Poliacrilamida
18.
Biotechniques ; 11(1): 102-4, 106, 108-9, 1991 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-1954008

RESUMO

A chemiluminescent DNA detection method is described and its application shown for both single-vector and multiplex DNA sequencing using the standard dideoxy chain-termination process. This recently developed detection method, which utilizes the light emitted by an enzyme-catalyzed dioxetane reaction, is highly sensitive and affords significant advantages in safety and speed over the traditional radioactive labeling method. When adapted to a multiplex strategy, this chemiluminescent detection method constitutes a safe, simple and rapid method for increasing the throughput of DNA sequencing procedures.


Assuntos
Sequência de Bases , DNA/química , DNA Polimerase Dirigida por DNA/metabolismo , Eletroforese em Gel de Poliacrilamida , Técnicas Genéticas , Vetores Genéticos/genética , Medições Luminescentes
19.
Nature ; 349(6311): 717-9, 1991 Feb 21.
Artigo em Inglês | MEDLINE | ID: mdl-1996140

RESUMO

The maternal messenger RNA An3 was originally identified localized to the animal hemisphere of Xenopus laevis oocytes, eggs and early embryos. Xenopus embryos depend on mRNA and protein present in the egg before fertilization (maternal molecules) to provide the information needed for early development. Localization of maternal mRNA gives cells derived from different regions of the egg distinctive capacities for protein synthesis. We show here that An3 mRNA encodes a protein with 74% identity to a protein encoded by the testes-specific mRNA PL10 found in mouse, which is proposed to have RNA helicase activity. Because the gene encoding An3 mRNA is reactivated after gastrulation and remains active throughout embryogenesis, we have examined its distribution in embryonic and adult tissues. Unlike PL10 mRNA, which is primarily restricted to the testes, An3 mRNA is broadly distributed in later development.


Assuntos
Oócitos/metabolismo , RNA Nucleotidiltransferases/genética , RNA Mensageiro/fisiologia , Zigoto/metabolismo , Sequência de Aminoácidos , Animais , Clonagem Molecular , Biblioteca Gênica , Camundongos , Dados de Sequência Molecular , Peso Molecular , Fases de Leitura Aberta/genética , Reação em Cadeia da Polimerase , RNA Helicases , Homologia de Sequência do Ácido Nucleico , Xenopus laevis
20.
EMBO J ; 6(10): 3065-70, 1987 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-2826129

RESUMO

The Xenopus laevis genome was screened for putative DNA-binding gene products by using the 'finger' region of the Drosophila gene Krüppel as a probe. The one gene detected, named Xfin, codes for a protein with 37 finger domains that comprise nearly 90% of the protein. In the light of studies by Rhodes and Klug (Cell, 46, 123-132, 1986), these data suggest that the Xfin protein has the capacity to bind an unusually large stretch (185 bases) of DNA. The Xfin gene is expressed as a maternal and zygotic mRNA that undergoes extensive polyadenylation changes during early development. The Xfin mRNA expression pattern and the potential DNA binding activity of the protein point to the possibility that the Xfin gene may have a role in controlling gene activity during early embryonic development.


Assuntos
Proteínas de Ligação a DNA/genética , Genes , Xenopus laevis/embriologia , Sequência de Aminoácidos , Animais , Sequência de Bases , DNA/análise , Enzimas de Restrição do DNA , Embrião não Mamífero/fisiologia , Dados de Sequência Molecular , RNA Mensageiro/genética , Transcrição Gênica
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