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Metab Eng ; 25: 8-19, 2014 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-24930895

RESUMO

Advances in metabolic engineering are enabling the creation of a large number of cell factories. However, high-throughput platforms do not yet exist for rapidly analyzing the metabolic network of the engineered cells. To fill the gap, we developed an integrated solution for fluxome profiling of large sets of biological systems and conditions. This platform combines a robotic system for (13)C-labelling experiments and sampling of labelled material with NMR-based isotopic fingerprinting and automated data interpretation. As a proof-of-concept, this workflow was applied to discriminate between Escherichia coli mutants with gradual expression of the glucose-6-phosphate dehydrogenase. Metabolic variants were clearly discriminated while pathways that support metabolic flexibility towards modulation of a single enzyme were elucidating. By directly connecting the data flow between cell cultivation and flux quantification, considerable advances in throughput, robustness, release of resources and screening capacity were achieved. This will undoubtedly facilitate the development of efficient cell factories.


Assuntos
Técnicas de Cultura Celular por Lotes/instrumentação , Proteínas de Escherichia coli/fisiologia , Escherichia coli/fisiologia , Perfilação da Expressão Gênica/instrumentação , Análise do Fluxo Metabólico/instrumentação , Metaboloma/fisiologia , Robótica/instrumentação , Técnicas de Cultura Celular por Lotes/métodos , Desenho de Equipamento , Análise de Falha de Equipamento , Mutação/genética , Mapeamento de Peptídeos/instrumentação , Mapeamento de Peptídeos/métodos , Integração de Sistemas
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