Hidden aliens: Application of digital PCR to track an exotic foraminifer across the Skagerrak (North Sea) correlates well with traditional morphospecies analysis.

The problem of invasive species is a well-studied one, but knowledge of free-living unicellular eukaryotic invasive species is lacking. A potentially invasive foraminifer (Rhizaria), Nonionella sp. T1, was recently discovered in the Skagerrak and its fjords. Digital polymerase chain reaction (dPCR) was applied to track the spread of this non-indigenous species using a new dPCR assay (T1-1). The use of dPCR appears highly complementary to traditional hand picking of foraminiferal shells from the sediment, and is far less time-consuming. This study indicates that Nonionella sp. T1 has bypassed the outer Skagerrak strait, instead becoming established in Swedish west coast fjords, constituting up to half of the living foraminiferal community in fjord mouth areas. The ecology of Nonionella sp. T1 and its potential invasive impacts are still largely unknown, but it appears to be an opportunist using several energy sources such as nitrate respiration and kleptoplasty along with a possibly more efficient reproductive strategy to gain an advantage over the native foraminiferal species. Future ecological studies of Nonionella sp. T1 could be aided by dPCR and the novel Nonionella sp. T1-specific T1-1 assay.

Recent environmental change in the Kosterhavet National Park marine protected area as reflected by hydrography and sediment proxy data.

The Koster Trench is the deepest part of the Kosterfjord (Skagerrak, North Sea), which stretches southward along the west coast of Sweden. Since 2009 Kosterfjord has been included in the Marine Protected Area Kosterhavet National Park. To effectively manage national parks, long-term time series of ecological data are needed and those can be derived from local sediment archives. In this study we present multiproxy geochemical (bulk TOC, C/N and heavy metals) and micropaleontological (dinoflagellate cysts, selected palynomorphs and benthic foraminifera) data from a sediment core taken in the southern part of the Koster Trench. Radiometric dating by 210Pb and 137Cs shows that the core archived the environmental changes that took place between 1988 and 2012. The TOC, heavy metals and foraminiferal indices indicate mainly high to good Ecological Quality Status, with moderate ecological quality for arsenic concentrations. Dinoflagellate cysts suggest a major change occurring in the upper water column around 2002. The cysts of Pentapharsodinium dalei peak around 1992 and show overall slightly higher relative abundances between 1988 and 2002. Increased abundance of Biecheleria baltica cysts, heterotrophic species, oligotrichids, pollen and spores characterise the upper core part deposited from 2002 to 2012. Also, there is a clear increase of Alexandrium cysts in the top of the core (~2008-2012). Benthic foraminifera show a major faunal change reflected in a significant increase of agglutinated species (mainly Textularia earlandi) from 2007 towards present day, while the lower part of the core (1988-2007) is dominated by calcareous species. Overall, the changes demonstrated by the dataset suggest an increased freshwater input or a higher river/land runoff, as supported by climatic and hydrographical data showing increased precipitation over the study area, decreasing salinity, and an increasing trend in particulate organic carbon in the surface waters. These changes, in combination with trawling activities, which have been moved to the deepest part of the trench since 2009, seem to favour dinoflagellate and benthic foraminiferal species with mixotrophic and omnivorous feeding strategies. Similar to the dinocysts, calculated foram-AMBI and NQIforam indices show a shift around 2002 suggesting that environmental changes occurring in the study area are likely linked to darkening of coastal waters.

A short note on a present-day benthic recovery status in the formerly heavily polluted Idefjord (Sweden/Norway).

Idefjord (Skagerrak, North Sea) has had a long pollution history due to a heavy exposure to effluents from sawmills and pulp and paper industry, which had a detrimental effect on fjord life. Earlier we presented a paper on the pollution history and benthic recovery in the fjord by studying sediment geochemistry (TOC and heavy metals) and benthic foraminifera in the sediment cores taken in the inner and the outer Idefjord. At that stage the foraminiferal (~benthic recovery) record was limited to years 2000 (inner fjord) and 2002 (outer fjord), in contrast to pollutant data reaching all the way up to 2014. In this short note we extend the foraminiferal record to year 2014 and fill the gap in the benthic recovery in the inner and the outer fjord over the last 12years. The results show that both inner and outer fjord inlets currently undergo a steady benthic recovery reflected in comeback of transitional and pre-pollution benthic foraminiferal species after 2000-2002 and towards 2014. The recovery is also supported by increasing faunal diversity, low dominance and since 2000-2002 re-appearance of calcareous foraminiferal species (Bulimina marginata, Elphidium spp., Epistominella vitrea, Hyalinea balthica and Lagena spp), which all disappeared during the period of maximum effluent discharges. At the same time, detection of opportunistic newcomers (e.g. Stainforthia fusiformis) and persisting absence of some transitional species such as Ammoscalaria tenuimargo suggests a recolonization by foraminiferal population with a different species composition as compared to the original pre-pollution community either due to changed environmental conditions or/and increased competition.

Latest Quaternary palaeoceanographic change in the eastern North Atlantic based upon a dinoflagellate cyst event ecostratigraphy.

The analyses of dinoflagellate cyst records, from the latest Quaternary sediments recovered from DSDP Core 610A taken on the Feni Ridge in the southern Rockall Trough, and part of core MD01-2461 on the continental margin of the Porcupine Seabight in the eastern North Atlantic Ocean, has provided evidence for significant oceanographic change encompassing the Last Glacial Maximum (LGM) and part of the Holocene. This together with other published records has led to a regional evaluation of oceanographic change in the eastern North Atlantic over the past 68 ka, based upon a distinctive dinoflagellate event ecostratigraphy. These changes reflect changes in the surface waters of the North Atlantic Current (NAC), and perhaps the deeper thermohaline Atlantic Meridional Overturning Circulation (AMOC), driving fundamental regime changes within the phytoplanktonic communities. Three distinctive dinoflagellate cyst associations based upon both factor and cluster analyses have been recognised. Associations characterised by Bitectatodinium tepikiense (between 61.1 ± 6.2 to 13.4 ± 1.1 ka BP), Nematosphaeropsis labyrinthus (between 10.5 ± 0.3 and 11.45 ± 0.8 ka. BP), and the cyst of Protoceratium reticulatum (between 8.5 ± 0.9 and 5.2 ± 1.3 ka. BP) indicate major change within the eastern North Atlantic oceanography. The transitions between these changes occur over a relatively short time span (c.1.5 ka), given our sampling resolution, and have the potential to be incorporated into an event stratigraphy through the latest Quaternary as recommended by the INTIMATE (INTegrating Ice core, MArine and TErrestrial records) group. The inclusion of a dinoflagellate cyst event stratigraphy would highlight changes within the phytoplankton of the North Atlantic Ocean as a fully glacial world changed to our present interglacial.

An almost completed pollution-recovery cycle reflected by sediment geochemistry and benthic foraminiferal assemblages in a Swedish-Norwegian Skagerrak fjord.

During the 20th century Idefjord was considered one of the most polluted marine areas in Scandinavia. For decades it received high discharges from paper/pulp industry, which made it anoxic and extremely polluted by heavy metals and organic contaminants. Today the fjord is close to fulfil a complete pollution-recovery cycle, which is recorded in its sediment archives. Here we report results from five sediment cores studied for TC, C/N, heavy metals and benthic foraminifera. All of the cores have laminations deposited during 1940-1980s and indicative of long-lasting anoxia; high TC and heavy metal content, poor foraminiferal faunas and lack of macrofauna. The upper part of the cores deposited since 1980s shows a gradual pollutant decrease and partial foraminiferal recovery. The majority of foraminiferal species in Idefjord are agglutinated opportunistic and stress-tolerant taxa, which to some extent tolerate hypoxia and are early colonisers of previously disturbed environments. The current study demonstrates a value of benthic foraminiferal stratigraphy as a useful tool in understanding processes driving environmental degradation and recovery of coastal ecosystems.