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1.
Genetika ; 51(9): 1035-46, 2015 Sep.
Artigo em Russo | MEDLINE | ID: mdl-26606800

RESUMO

Complex molecular genetic, karyological, and comparative morphological analyses of eelpouts of the genus Zoarces from the Sea of Okhotsk were carried out. Genetic heterogeneity of Z. elongatus and the existence of a considerably diverged form probably deserving of species status was discovered. The eelpouts caught near Shantar Islands were identified as Z. fedorovi and Z. andriashevi. The new data point to a wider distribution of these species, from Western Kamchatka to the Shantar Islands.


Assuntos
Peixes/genética , Variação Genética , Cariótipo , Filogenia , Animais , Oceanos e Mares
2.
Genetika ; 51(11): 1273-90, 2015 Nov.
Artigo em Russo | MEDLINE | ID: mdl-26845857

RESUMO

Based on an analysis of sequence variation in mitochondrial and nuclear markers, the levels of divergence, relationships, and system of the suborder Zoarcoidei was defined. It was demonstrated that DNA lineages of the families Bathymasteridae and Cebidichthyidae were positioned at the bottom ofthe suborder phylogenetic tree. The family Zoarcidae is a monophyletic group, the youngest in the evolutionary terms. Zoarcidae, Anarhichadidae, Neozorcidae, and Eulophiidae form a group of related families. The family Stichaeidae is heterogeneous and has a polyphyletic origin; within this family, the subfamilies Chirolophinae, Alectgiinae, Xiphisterinae, and Stichaeinae are sister taxa. The subfamilies Opisthocentrinae and Lumpeninae are isolated from Stichaedae; Opisthocentrinae is closely associated with the families Pholidae and Ptilichthyidae, and Lumpeninae is closely associated with Zaproridae and Cryptacanthodidae. It is suggested that the rank of subfamilies Opisthocentrinae and Lumpeninae should be raised.


Assuntos
Bases de Dados Genéticas , Proteínas de Peixes/genética , Perciformes/classificação , Perciformes/genética , Animais
3.
Genetika ; 50(3): 321-9, 2014 Mar.
Artigo em Russo | MEDLINE | ID: mdl-25438553

RESUMO

Analysis of sequence variation in the mitochondrial and nuclear genes in Azygopterus corallinus showed that this species was genetically close to the group uniting the representatives of the families Zoarcidae, Neozoarcidae, and Anarhichadidae. The considerable genetic differences between A. corallinus and the members of the family Stichaedae, to which it was assigned earlier, are consistent with the divergence estimates between the other families of the suborder Zoarcoidei (Zaproridae, Ptilichthyidae, Pholidae, Cryptacanthodidae, Bathymasteridae).


Assuntos
Proteínas de Peixes/genética , Genes Mitocondriais , Perciformes/genética , Polimorfismo Genético , Animais , Perciformes/classificação , Filogenia
4.
Genetika ; 48(3): 361-71, 2012 Mar.
Artigo em Russo | MEDLINE | ID: mdl-22679783

RESUMO

Sequence variation ofthe mitochondrial COI, cytochrome b, and 16S RNA genes, as well as nuclear RNF213 gene was examined in the genera Lycenchelys and Lycodapus with the purpose of determination of their positions in the system of the family Zoarcidae. It was demonstrated that the genus Lycodapus was considerably closer to the generic group of Lycogramminae (Lycogrammoides, Bothrocara, Allolepis, Bothrocarhichthys) than the genus Lycenchelys. However, on the phylogenetic trees both of these genera were located in the clade of the subfamily Lycodinae. Genetic heterogeneity of the genus Lycenchelys, represented by two species groups differing in distribution patterns (northeastern Pacific and Antarctic) and showing more profound differences than the genera of subfamily Lycodinae, was demonstrated.


Assuntos
Perciformes/classificação , Perciformes/genética , Filogenia , Animais , Citocromos b/genética , Evolução Molecular , Variação Genética , Mitocôndrias/genética , RNA Ribossômico 16S/genética
5.
Genetika ; 46(11): 1525-32, 2010 Nov.
Artigo em Russo | MEDLINE | ID: mdl-21261063

RESUMO

Molecular genetic and morphological analysis of eelpouts of the genus Zoarces was carried out. Based on the mitochondrial DNA sequence variation, haplotypes of notched-fin eelpout, Z. elogatus, more closely related Fedorov eelpout, Z. fedorovi, and common eelpout, Z. viviparus, as well as of Andriyashev eelpout, Z. andriashevi, were grouped in one macrocluster. Haplotypes of American eelpout, Z. americanus, and blotched eelpout, Z. gillii, clustered separately from other species. The genetic differences between Z. gillii and the other eelpout species were very high for within-genus comparisons, constituting 7.62%. Species divergence in terms of morphological characters was generally consistent with molecular genetic data and confirmed distinct isolation of American eelpout, and especially of blotched eelpout.


Assuntos
Proteínas de Peixes/genética , Perciformes/genética , Animais , Citocromos c/genética , Perciformes/anatomia & histologia , Filogenia , RNA Ribossômico 16S/genética , Especificidade da Espécie
6.
Genetika ; 44(7): 920-8, 2008 Jul.
Artigo em Russo | MEDLINE | ID: mdl-18767540

RESUMO

The mitochondrial COI gene was for the first time sequenced in eelpout species of the genus Zoarces from the Taui Bay of the Sea of Okhotsk: notched-fin Z. elongatus Kner, 1868 and the new sympatric form Zoarces sp., differing in a large set of morphological traits. The two species were compared with European eelpout Z. viviparus Linnaeus, 1758 from the Finnish Bay of the Baltic Sea. Divergence and phylogenetic analyses demonstrated a greater genetic similarity between Zoarces sp. and Z. viviparus than between sympatric Zoarces sp. and Z. elongatus.


Assuntos
Proteínas de Peixes/genética , Proteínas Mitocondriais/genética , Perciformes/genética , Polimorfismo Genético/genética , Locos de Características Quantitativas/genética , Animais , Europa (Continente) , Oceanos e Mares , Sibéria , Especificidade da Espécie
7.
Genetika ; 44(1): 112-9, 2008 Jan.
Artigo em Russo | MEDLINE | ID: mdl-18409393

RESUMO

The first analysis of restriction fragment length polymorphism (RFLP) of the mitochondrial gene of cytochrome b of fish from the Eelpout Family (Zoarcidae) from the northern Sea of Okhotsk has been performed. The mean genetic distances between the subfamilies Zoarcinae and Lycodinae, subfamilies Lycodinae and Gymnelinae, and subfamilies Zoarcinae and Gymnelinae are 11.14, 13.87, and 14%, respectively. Species of the genus Lycodes (Lycodinae) are characterized by a mtDNA small divergence (on average, 2.04%) and are divided into two groups on the basis of lateral line morphology. Magadania skopetsi, an endemic of Tauiskaya Bay of the Sea of Okhotsk, is genetically close to Hadropareia middendorffii from the same subfamily (Gymnelinae). The mtDNA sequences of species from the genus Lycogrammoides (Lycodinae) differ by 3.83%. The genetic differences between the eelpout Zoarces elongatus Zoarces sp. (d = 4.54%) suggest that the latter is a separate species.


Assuntos
Citocromos b/genética , DNA Mitocondrial/genética , Perciformes/genética , Filogenia , Polimorfismo de Fragmento de Restrição , Animais , Oceanos e Mares , Especificidade da Espécie
8.
Genetika ; 42(2): 233-43, 2006 Feb.
Artigo em Russo | MEDLINE | ID: mdl-16583708

RESUMO

In previously identified sympatric char forms (species) from Kronotsky Lake (Kamchatka Peninsula) and a number of other chars from the genus Salvelinus, nucleotide sequences of the mtDNA cytochrome b gene were determined and phylogenetic analysis of these forms was performed. The divergence of the cytochrome b gene in the Kronotsky char group (0.48%) coincided with the interpopulation difference estimates in northern Dolly Varden, which indicates a relatively recent divergence of the chars from Kronotsky Lake. Haplotypes of each form of the Kronotsky Lake chars are divided into two groups, which belonged to two different phylogenetic mtDNA lineages of northern Dolly Varden from Chukotka and Kamchatka. The formation of the Kronotsky char forms proved to be unrelated to the observed variability of the mtDNA cytochrome b gene.


Assuntos
Citocromos b/genética , Filogenia , Polimorfismo Genético/genética , Truta/genética , Animais , Sibéria
9.
Genetika ; 41(8): 1096-107, 2005 Aug.
Artigo em Russo | MEDLINE | ID: mdl-16161631

RESUMO

Chars from the genus Salvelinus, inhabiting lakes and lake-river systems, belong to morphologically and ecologically different forms whose taxonomic status is under dispute. In the present work, we have examined genetic variation and divergence in various chars from the Kronotsky lake basin: the lacustrine chars (white, nose, and long-head) and Dolly Varden char Salvelinus malma. The study was conducted using analysis of allozyme and microsatellite loci, myogens, RAPD, and restriction analysis of two mtDNA segments. The estimates of heterozygoisty at allozyme and microsatellite loci were similar to the corresponding parameters in populations of northern Dolly Varden and Arctic char. Heterozygote deficit was recorded in both samples of individual forms, and in the combined sample of all chars from Kronotsky Lake. For both markers, appreciable genetic differentiation among the samples of different char forms was found, which was comparable to that among the spatially isolated populations of northern Dolly Varden. This result indicates reproductive isolation among the char forms examined. However, this isolation is not complete, because no fixed differences between the forms by any of the genetic systems analyzed was found. The genetic differentiation among different forms of lacustrine chars, which corresponds to the interpopulation rather than interspecies level, is thought to be explained by their comparatively recent divergence.


Assuntos
DNA Mitocondrial/genética , Polimorfismo de Fragmento de Restrição , Locos de Características Quantitativas/genética , Truta/genética , Animais , Enzimas/genética , Marcadores Genéticos/genética , Técnica de Amplificação ao Acaso de DNA Polimórfico , Sibéria , Especificidade da Espécie
10.
Genetika ; 40(3): 322-33, 2004 Mar.
Artigo em Russo | MEDLINE | ID: mdl-15125246

RESUMO

Nucleotide sequences of two (405- and 1050-bp) regions of mitochondrial DNA (mtDNA) cytochrome c gene were established in chars of the genus Salvelinus from Russian Far East and Siberia. Based on the divergence and phylogenetic analysis of nucleotide sequences of the mtDNA cytochrome c gene, S. laecomaenis was shown to carry the most ancient mitochondrial lineage, which is close to the ancestral one. The archaic mtDNA of S. levanidovi occupied an isolated position on the phylogenetic trees. The mtDNA lineage of the southern S. malma was close to the S. alpinus-S. malma complex group. Within the S. alpinus-S. malma complex, three groups of mtDNA types having particular geographic distributions were distinguished. The Kolyma-Chukotka group includes lake S. taranetzi, S. boganidae and S. elgyticus from Chukotka, lake chars from Kolyma. The Okhotsk group is represented by northern S. malma, lake chars from northern Sea of Okhotsk, and anadromous S. taranetzi. The Siberian group is close to the Okhotsk one and consists of Taimyr and Baikal region chars as well as Arctic char from Finland. The divergence of char mitochondrial lineages was dated to the Pliocene-Pleistocene.


Assuntos
Citocromos b/genética , DNA Mitocondrial/genética , Truta/genética , Animais , Sequência de Bases , DNA Mitocondrial/química , Dados de Sequência Molecular , Homologia de Sequência do Ácido Nucleico
11.
Genetika ; 40(12): 1678-85, 2004 Dec.
Artigo em Russo | MEDLINE | ID: mdl-15648151

RESUMO

Nucleotide sequence analysis of the mitochondrial cyttochrome b gene in the genus Salvelinus revealed hybrids with S. leucomaenis in S. malma malma populations ofthe Northern Okhotsk Sea basin. Hybrids of S. m. malma and S. m. krascheninnikovi were found in S. m. malma populations from the Northern Okhotsk Sea basin and Kamchatka. The findings testify to a secondary contact and mtDNA transfer between these species and forms. It was assumed that introgressive hybridization took place both long ago and relatively recently and occurred in one direction: from S. leucomaenis or S. m. krascheninnikovi to S. m. malma.


Assuntos
Citocromos b/genética , DNA Mitocondrial/genética , Transferência Genética Horizontal/genética , Variação Genética , Hibridização Genética , Truta/genética , Animais , Filogenia
12.
Genetika ; 39(1): 103-6, 2003 Jan.
Artigo em Russo | MEDLINE | ID: mdl-12624940

RESUMO

Restriction enzyme analysis was employed in studying the mitochondrial DNA (mtDNA) ATPase6/ND4L region in several Northeast Asian populations of resident lake char of the genus Salvelinus. On evidence of mitotypes, genetic similarity was assumed for populations of neiva (Ueginskoe Lake), lake resident char from the northern coast of the Sea of Okhotsk (Mak-Mak Lake and Elekchanskie lakes), and dolly varden. Mitotype AAAA proved to be common for these populations. Lake char populations of the Juliet and Maxi lakes (the basin of the Kolyma river) had mitotype DBAA, which is similar to mitotype DBAB observed earlier in Taranetz char S. taranetzi from Chukotka. The divergence between mitotypes AAA and DBAA was estimated at 0.3%. Different origins were assumed for the lake resident char populations from the basins of the Sea of Okhotsk and of the Kolyma River, the former originating in the Pacific and the latter, in the Arctic basins.


Assuntos
Enzimas de Restrição do DNA , DNA Mitocondrial/genética , Água Doce , Genética Populacional , Truta/genética , Animais , Ásia , Marcadores Genéticos , Sibéria
13.
Genetika ; 38(4): 521-8, 2002 Apr.
Artigo em Russo | MEDLINE | ID: mdl-12018170

RESUMO

Restriction fragment length polymorphism of the ATPase6/ND4L and cytochrome b regions of mitochondrial DNA (mtDNA) was studied in populations of the northern and southern forms of the Dolly Varden char Salvelinus malma from the Asian coast of the northern part of the Pacific Ocean. Seven genotypes of mtDNA were found, of which AAAA/ACCC and BBAC/ACEC characterize the northern and southern groups of populations, respectively. By the identity test, the studied populations of the Chukotka and Kamchatka peninsulas and the northern coast of the Sea of Okhotsk significantly differed from the studied populations of Sakhalin Island, Primorye, and Kuril Islands.


Assuntos
DNA Mitocondrial , Peixes/genética , Variação Genética , Mapeamento por Restrição , Animais , Grupo dos Citocromos b/genética , Complexo I de Transporte de Elétrons , Genética Populacional , NADH NADPH Oxirredutases/genética , Oceano Pacífico , Sibéria
14.
Genetika ; 36(7): 908-14, 2000 Jul.
Artigo em Russo | MEDLINE | ID: mdl-10994493

RESUMO

Nucleotide sequence of the 307-bp fragment of the mitochondrial DNA cytochrome b gene was determined in representatives of the three species of the Salvelinus genus, specifically, dolly varden char (S. malma), taranetz char (S. taranetzi), and white-spotted char (S. leucomaenis). These results pointed to a high level of mitochondrial DNA (mtDNA) divergence between white-spotted char and dolly varden char, on the one hand, and taranetz char, on the other (the mean d value was 5.45%). However, the divergence between the dolly varden char and taranetz char was only 0.81%, which is comparable with the level of intraspecific divergence in the dolly varden char (d = 0.87%). It was shown that the dolly varden char mitochondrial gene pool contained DNA lineages differing from the main mtDNA pool at least in the taranetz char-specific mitochondrial lineages. One of these dolly varden char mtDNA lineages was characterized by the presence of the restriction endonuclease MspI-D variant of the cytochrome b gene. This lineage was widely distributed in the Chukotka populations but it was not detected in the Yana River (Okhotsk sea) populations. These findings suggest that dolly varden char has a more ancient evolutionary lineage, diverging from the common ancestor earlier than did taranetz char.


Assuntos
Grupo dos Citocromos b/genética , DNA Mitocondrial/genética , Peixes/genética , Animais , Sequência de Bases , DNA , Pool Gênico , Dados de Sequência Molecular , Filogenia , Polimorfismo Genético , Homologia de Sequência do Ácido Nucleico
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