HER2GAN: Overcome the Scarcity of HER2 Breast Cancer Dataset Based on Transfer Learning and GAN Model.

INTRODUCTION: Immunohistochemistry (IHC) is crucial for breast cancer diagnosis, classification, and individualized treatment. IHC is used to measure the levels of expression of hormone receptors (estrogen and progesterone receptors), human epidermal growth factor receptor 2 (HER2), and other biomarkers, which are used to make treatment decisions and predict how well a patient will do. The evaluation of the breast cancer score on IHC slides, taking into account structural and morphological features as well as a scarcity of relevant data, is one of the most important issues in the IHC debate. Several recent studies have utilized machine learning and deep learning techniques to resolve these issues. MATERIALS AND METHODS: This paper introduces a new approach for addressing the issue based on supervised deep learning. A GAN-based model is proposed for generating high-quality HER2 images and identifying and classifying HER2 levels. Using transfer learning methodologies, the original and generated images were evaluated. RESULTS AND CONCLUSION: All of the models have been trained and evaluated using publicly accessible and private data sets, respectively. The InceptionV3 and InceptionResNetV2 models achieved a high accuracy of 93% with the combined generated and original images used for training and testing, demonstrating the exceptional quality of the details in the synthesized images.

Multi-population Black Hole Algorithm for the problem of data clustering.

The retrieval of important information from a dataset requires applying a special data mining technique known as data clustering (DC). DC classifies similar objects into a groups of similar characteristics. Clustering involves grouping the data around k-cluster centres that typically are selected randomly. Recently, the issues behind DC have called for a search for an alternative solution. Recently, a nature-based optimization algorithm named Black Hole Algorithm (BHA) was developed to address the several well-known optimization problems. The BHA is a metaheuristic (population-based) that mimics the event around the natural phenomena of black holes, whereby an individual star represents the potential solutions revolving around the solution space. The original BHA algorithm showed better performance compared to other algorithms when applied to a benchmark dataset, despite its poor exploration capability. Hence, this paper presents a multi-population version of BHA as a generalization of the BHA called MBHA wherein the performance of the algorithm is not dependent on the best-found solution but a set of generated best solutions. The method formulated was subjected to testing using a set of nine widespread and popular benchmark test functions. The ensuing experimental outcomes indicated the highly precise results generated by the method compared to BHA and comparable algorithms in the study, as well as excellent robustness. Furthermore, the proposed MBHA achieved a high rate of convergence on six real datasets (collected from the UCL machine learning lab), making it suitable for DC problems. Lastly, the evaluations conclusively indicated the appropriateness of the proposed algorithm to resolve DC issues.

Machine learning algorithms for high-resolution prediction of spatiotemporal distribution of air pollution from meteorological and soil parameters.

This study uses machine learning (ML) models for a high-resolution prediction (0.1°×0.1°) of air fine particular matter (PM2.5) concentration, the most harmful to human health, from meteorological and soil data. Iraq was considered the study area to implement the method. Different lags and the changing patterns of four European Reanalysis (ERA5) meteorological variables, rainfall, mean temperature, wind speed and relative humidity, and one soil parameter, the soil moisture, were used to select the suitable set of predictors using a non-greedy algorithm known as simulated annealing (SA). The selected predictors were used to simulate the temporal and spatial variability of air PM2.5 concentration over Iraq during the early summer (May-July), the most polluted months, using three advanced ML models, extremely randomized trees (ERT), stochastic gradient descent backpropagation (SGD-BP) and long short-term memory (LSTM) integrated with Bayesian optimizer. The spatial distribution of the annual average PM2.5 revealed the population of the whole of Iraq is exposed to a pollution level above the standard limit. The changes in temperature and soil moisture and the mean wind speed and humidity of the month before the early summer can predict the temporal and spatial variability of PM2.5 over Iraq during May-July. Results revealed the higher performance of LSTM with normalized root-mean-square error and Kling-Gupta efficiency of 13.4% and 0.89, compared to 16.02% and 0.81 for SDG-BP and 17.9% and 0.74 for ERT. The LSTM could also reconstruct the observed spatial distribution of PM2.5 with MapCurve and Cramer's V values of 0.95 and 0.91, compared to 0.9 and 0.86 for SGD-BP and 0.83 and 0.76 for ERT. The study provided a methodology for forecasting spatial variability of PM2.5 concentration at high resolution during the peak pollution months from freely available data, which can be replicated in other regions for generating high-resolution PM2.5 forecasting maps.

Fitness dependent optimizer with neural networks for COVID-19 patients.

The Coronavirus, known as COVID-19, which appeared in 2019 in China, has significantly affected the global health and become a huge burden on health institutions all over the world. These effects are continuing today. One strategy for limiting the virus's transmission is to have an early diagnosis of suspected cases and take appropriate measures before the disease spreads further. This work aims to diagnose and show the probability of getting infected by the disease according to textual clinical data. In this work, we used five machine learning techniques (GWO_MLP, GWO_CMLP, MGWO_MLP, FDO_MLP, FDO_CMLP) all of which aim to classify Covid-19 patients into two categories (Positive and Negative). Experiments showed promising results for all used models. The applied methods showed very similar performance, typically in terms of accuracy. However, in each tested dataset, FDO_MLP and FDO_CMLP produced the best results with 100% accuracy. The other models' results varied from one experiment to the other. It is concluded that the models on which the FDO algorithm was used as a learning algorithm had the possibility of obtaining higher accuracy. However, it is found that FDO has the longest runtime compared to the other algorithms. The link to the Covid 19 models is found here: https://github.com/Tarik4Rashid4/covid19models.

Evolving deep convolutional neutral network by hybrid sine-cosine and extreme learning machine for real-time COVID19 diagnosis from X-ray images.

The COVID19 pandemic globally and significantly has affected the life and health of many communities. The early detection of infected patients is effective in fighting COVID19. Using radiology (X-Ray) images is, perhaps, the fastest way to diagnose the patients. Thereby, deep Convolutional Neural Networks (CNNs) can be considered as applicable tools to diagnose COVID19 positive cases. Due to the complicated architecture of a deep CNN, its real-time training and testing become a challenging problem. This paper proposes using the Extreme Learning Machine (ELM) instead of the last fully connected layer to address this deficiency. However, the parameters' stochastic tuning of ELM's supervised section causes the final model unreliability. Therefore, to cope with this problem and maintain network reliability, the sine-cosine algorithm was utilized to tune the ELM's parameters. The designed network is then benchmarked on the COVID-Xray-5k dataset, and the results are verified by a comparative study with canonical deep CNN, ELM optimized by cuckoo search, ELM optimized by genetic algorithm, and ELM optimized by whale optimization algorithm. The proposed approach outperforms comparative benchmarks with a final accuracy of 98.83% on the COVID-Xray-5k dataset, leading to a relative error reduction of 2.33% compared to a canonical deep CNN. Even more critical, the designed network's training time is only 0.9421 ms and the overall detection test time for 3100 images is 2.721 s.

Exploiting the Generative Adversarial Network Approach to Create a Synthetic Topography Corneal Image.

Corneal diseases are the most common eye disorders. Deep learning techniques are used to perform automated diagnoses of cornea. Deep learning networks require large-scale annotated datasets, which is conceded as a weakness of deep learning. In this work, a method for synthesizing medical images using conditional generative adversarial networks (CGANs), is presented. It also illustrates how produced medical images may be utilized to enrich medical data, improve clinical decisions, and boost the performance of the conventional neural network (CNN) for medical image diagnosis. The study includes using corneal topography captured using a Pentacam device from patients with corneal diseases. The dataset contained 3448 different corneal images. Furthermore, it shows how an unbalanced dataset affects the performance of classifiers, where the data are balanced using the resampling approach. Finally, the results obtained from CNN networks trained on the balanced dataset are compared to those obtained from CNN networks trained on the imbalanced dataset. For performance, the system estimated the diagnosis accuracy, precision, and F1-score metrics. Lastly, some generated images were shown to an expert for evaluation and to see how well experts could identify the type of image and its condition. The expert recognized the image as useful for medical diagnosis and for determining the severity class according to the shape and values, by generating images based on real cases that could be used as new different stages of illness between healthy and unhealthy patients.

Kurdish Handwritten character recognition using deep learning techniques.

Handwriting recognition is regarded as a dynamic and inspiring topic in the exploration of pattern recognition and image processing. It has many applications including a blind reading aid, computerized reading, and processing for paper documents, making any handwritten document searchable and converting it into structural text form. High accuracy rates have been achieved by this technology when recognizing handwriting recognition systems for English, Chinese Arabic, Persian, and many other languages. However, there is not such a system for recognizing Kurdish handwriting. In this paper, an attempt is made to design and develop a model that can recognize handwritten characters for Kurdish alphabets using deep learning techniques. Kurdish (Sorani) contains 34 characters and mainly employs an Arabic/Persian based script with modified alphabets. In this work, a Deep Convolutional Neural Network model is employed that has shown exemplary performance in handwriting recognition systems. Then, a comprehensive database has been created for handwritten Kurdish characters which contain more than 40 thousand images. The created database has been used for training the Deep Convolutional Neural Network model for classification and recognition tasks. In the proposed system the experimental results show an acceptable recognition level. The testing results reported an 83% accuracy rate, and training accuracy reported a 96% accuracy rate. From the experimental results, it is clear that the proposed deep learning model is performing well and comparable to the similar to other languages handwriting recognition systems.

Harmony search: Current studies and uses on healthcare systems.

One of the popular metaheuristic search algorithms is Harmony Search (HS). It has been verified that HS can find solutions to optimization problems due to its balanced exploratory and convergence behavior and its simple and flexible structure. This capability makes the algorithm preferable to be applied in several real-world applications in various fields, including healthcare systems, different engineering fields, and computer science. The popularity of HS urges us to provide a comprehensive survey of the literature on HS and its variants on health systems, analyze its strengths and weaknesses, and suggest future research directions. In this review paper, the current studies and uses of harmony search are studied in four main domains. (i) The variants of HS, including its modifications and hybridization. (ii) Summary of the previous review works. (iii) Applications of HS in healthcare systems. (iv) And finally, an operational framework is proposed for the applications of HS in healthcare systems. The main contribution of this review is intended to provide a thorough examination of HS in healthcare systems while also serving as a valuable resource for prospective scholars who want to investigate or implement this method.

Improved Fitness-Dependent Optimizer for Solving Economic Load Dispatch Problem.

Economic load dispatch depicts a fundamental role in the operation of power systems, as it decreases the environmental load, minimizes the operating cost, and preserves energy resources. The optimal solution to economic load dispatch problems and various constraints can be obtained by evolving several evolutionary and swarm-based algorithms. The major drawback to swarm-based algorithms is premature convergence towards an optimal solution. Fitness-dependent optimizer is a novel optimization algorithm stimulated by the decision-making and reproductive process of bee swarming. Fitness-dependent optimizer (FDO) examines the search spaces based on the searching approach of particle swarm optimization. To calculate the pace, the fitness function is utilized to generate weights that direct the search agents in the phases of exploitation and exploration. In this research, the authors have used a fitness-dependent optimizer to solve the economic load dispatch problem by reducing fuel cost, emission allocation, and transmission loss. Moreover, the authors have enhanced a novel variant of the fitness-dependent optimizer, which incorporates novel population initialization techniques and dynamically employed sine maps to select the weight factor for the fitness-dependent optimizer. The enhanced population initialization approach incorporates a quasi-random Sabol sequence to generate the initial solution in the multidimensional search space. A standard 24-unit system is employed for experimental evaluation with different power demands. The empirical results obtained using the enhanced variant of the fitness-dependent optimizer demonstrate superior performance in terms of low transmission loss, low fuel cost, and low emission allocation compared to the conventional fitness-dependent optimizer. The experimental study obtained 7.94E-12, the lowest transmission loss using the enhanced fitness-dependent optimizer. Correspondingly, various standard estimations are used to prove the stability of the fitness-dependent optimizer in phases of exploitation and exploration.

Medical dataset classification for Kurdish short text over social media.

The Facebook application is used as a resource for collecting the comments of this dataset, The dataset consists of 6756 comments to create a Medical Kurdish Dataset (MKD). The samples are comments of users, which are gathered from different posts of pages (Medical, News, Economy, Education, and Sport). Six steps as a preprocessing technique are performed on the raw dataset to clean and remove noise in the comments by replacing characters. The comments (short text) are labeled for positive class (medical comment) and negative class (non-medical comment) as text classification. The percentage ratio of the negative class is 55% while the positive class is 45%.

A Comprehensive Survey on the Internet of Things with the Industrial Marketplace.

There is no doubt that new technology has become one of the crucial parts of most people's lives around the world. By and large, in this era, the Internet and the Internet of Things (IoT) have become the most indispensable parts of our lives. Recently, IoT technologies have been regarded as the most broadly used tools among other technologies. The tools and the facilities of IoT technologies within the marketplace are part of Industry 4.0. The marketplace is too regarded as a new area that can be used with IoT technologies. One of the main purposes of this paper is to highlight using IoT technologies in Industry 4.0, and the Industrial Internet of Things (IIoT) is another feature revised. This paper focuses on the value of the IoT in the industrial domain in general; it reviews the IoT and focuses on its benefits and drawbacks, and presents some of the IoT applications, such as in transportation and healthcare. In addition, the trends and facts that are related to the IoT technologies on the marketplace are reviewed. Finally, the role of IoT in telemedicine and healthcare and the benefits of IoT technologies for COVID-19 are presented as well.

COV-ECGNET: COVID-19 detection using ECG trace images with deep convolutional neural network.

The reliable and rapid identification of the COVID-19 has become crucial to prevent the rapid spread of the disease, ease lockdown restrictions and reduce pressure on public health infrastructures. Recently, several methods and techniques have been proposed to detect the SARS-CoV-2 virus using different images and data. However, this is the first study that will explore the possibility of using deep convolutional neural network (CNN) models to detect COVID-19 from electrocardiogram (ECG) trace images. In this work, COVID-19 and other cardiovascular diseases (CVDs) were detected using deep-learning techniques. A public dataset of ECG images consisting of 1937 images from five distinct categories, such as normal, COVID-19, myocardial infarction (MI), abnormal heartbeat (AHB), and recovered myocardial infarction (RMI) were used in this study. Six different deep CNN models (ResNet18, ResNet50, ResNet101, InceptionV3, DenseNet201, and MobileNetv2) were used to investigate three different classification schemes: (i) two-class classification (normal vs COVID-19); (ii) three-class classification (normal, COVID-19, and other CVDs), and finally, (iii) five-class classification (normal, COVID-19, MI, AHB, and RMI). For two-class and three-class classification, Densenet201 outperforms other networks with an accuracy of 99.1%, and 97.36%, respectively; while for the five-class classification, InceptionV3 outperforms others with an accuracy of 97.83%. ScoreCAM visualization confirms that the networks are learning from the relevant area of the trace images. Since the proposed method uses ECG trace images which can be captured by smartphones and are readily available facilities in low-resources countries, this study will help in faster computer-aided diagnosis of COVID-19 and other cardiac abnormalities.

Pulmonary Diffuse Airspace Opacities Diagnosis from Chest X-Ray Images Using Deep Convolutional Neural Networks Fine-Tuned by Whale Optimizer.

The early diagnosis and the accurate separation of COVID-19 from non-COVID-19 cases based on pulmonary diffuse airspace opacities is one of the challenges facing researchers. Recently, researchers try to exploit the Deep Learning (DL) method's capability to assist clinicians and radiologists in diagnosing positive COVID-19 cases from chest X-ray images. In this approach, DL models, especially Deep Convolutional Neural Networks (DCNN), propose real-time, automated effective models to detect COVID-19 cases. However, conventional DCNNs usually use Gradient Descent-based approaches for training fully connected layers. Although GD-based Training (GBT) methods are easy to implement and fast in the process, they demand numerous manual parameter tuning to make them optimal. Besides, the GBT's procedure is inherently sequential, thereby parallelizing them with Graphics Processing Units is very difficult. Therefore, for the sake of having a real-time COVID-19 detector with parallel implementation capability, this paper proposes the use of the Whale Optimization Algorithm for training fully connected layers. The designed detector is then benchmarked on a verified dataset called COVID-Xray-5k, and the results are verified by a comparative study with classic DCNN, DUICM, and Matched Subspace classifier with Adaptive Dictionaries. The results show that the proposed model with an average accuracy of 99.06% provides 1.87% better performance than the best comparison model. The paper also considers the concept of Class Activation Map to detect the regions potentially infected by the virus. This was found to correlate with clinical results, as confirmed by experts. Although results are auspicious, further investigation is needed on a larger dataset of COVID-19 images to have a more comprehensive evaluation of accuracy rates.

An extensive dataset of handwritten central Kurdish isolated characters.

To collect the handwritten format of separate Kurdish characters, each character has been printed on a grid of 14 × 9 of A4 paper. Each paper is filled with only one printed character so that the volunteers know what character should be written in each paper. Then each paper has been scanned, spliced, and cropped with a macro in photoshop to make sure the same process is applied for all characters. The grids of the characters have been filled mainly by volunteers of students from multiple universities in Erbil.

A novel cluster detection of COVID-19 patients and medical disease conditions using improved evolutionary clustering algorithm star.

With the increasing number of samples, the manual clustering of COVID-19 and medical disease data samples becomes time-consuming and requires highly skilled labour. Recently, several algorithms have been used for clustering medical datasets deterministically; however, these definitions have not been effective in grouping and analysing medical diseases. The use of evolutionary clustering algorithms may help to effectively cluster these diseases. On this presumption, we improved the current evolutionary clustering algorithm star (ECA*), called iECA*, in three manners: (i) utilising the elbow method to find the correct number of clusters; (ii) cleaning and processing data as part of iECA* to apply it to multivariate and domain-theory datasets; (iii) using iECA* for real-world applications in clustering COVID-19 and medical disease datasets. Experiments were conducted to examine the performance of iECA* against state-of-the-art algorithms using performance and validation measures (validation measures, statistical benchmarking, and performance ranking framework). The results demonstrate three primary findings. First, iECA* was more effective than other algorithms in grouping the chosen medical disease datasets according to the cluster validation criteria. Second, iECA* exhibited the lower execution time and memory consumption for clustering all the datasets, compared to the current clustering methods analysed. Third, an operational framework was proposed to rate the effectiveness of iECA* against other algorithms in the datasets analysed, and the results indicated that iECA* exhibited the best performance in clustering all medical datasets. Further research is required on real-world multi-dimensional data containing complex knowledge fields for experimental verification of iECA* compared to evolutionary algorithms.

Performance evaluation results of evolutionary clustering algorithm star for clustering heterogeneous datasets.

This article presents the data used to evaluate the performance of evolutionary clustering algorithm star (ECA*) compared to five traditional and modern clustering algorithms. Two experimental methods are employed to examine the performance of ECA* against genetic algorithm for clustering++ (GENCLUST++), learning vector quantisation (LVQ), expectation maximisation (EM), K-means++ (KM++) and K-means (KM). These algorithms are applied to 32 heterogenous and multi-featured datasets to determine which one performs well on the three tests. For one, ther paper examines the efficiency of ECA* in contradiction of its corresponding algorithms using clustering evaluation measures. These validation criteria are objective function and cluster quality measures. For another, it suggests a performance rating framework to measurethe the performance sensitivity of these algorithms on varos dataset features (cluster dimensionality, number of clusters, cluster overlap, cluster shape and cluster structure). The contributions of these experiments are two-folds: (i) ECA* exceeds its counterpart aloriths in ability to find out the right cluster number; (ii) ECA* is less sensitive towards dataset features compared to its competitive techniques. Nonetheless, the results of the experiments performed demonstrate some limitations in the ECA*: (i) ECA* is not fully applied based on the premise that no prior knowledge exists; (ii) Adapting and utilising ECA* on several real applications has not been achieved yet.

Real­time COVID-19 diagnosis from X-Ray images using deep CNN and extreme learning machines stabilized by chimp optimization algorithm.

Real-time detection of COVID-19 using radiological images has gained priority due to the increasing demand for fast diagnosis of COVID-19 cases. This paper introduces a novel two-phase approach for classifying chest X-ray images. Deep Learning (DL) methods fail to cover these aspects since training and fine-tuning the model's parameters consume much time. In this approach, the first phase comes to train a deep CNN working as a feature extractor, and the second phase comes to use Extreme Learning Machines (ELMs) for real-time detection. The main drawback of ELMs is to meet the need of a large number of hidden-layer nodes to gain a reliable and accurate detector in applying image processing since the detective performance remarkably depends on the setting of initial weights and biases. Therefore, this paper uses Chimp Optimization Algorithm (ChOA) to improve results and increase the reliability of the network while maintaining real-time capability. The designed detector is to be benchmarked on the COVID-Xray-5k and COVIDetectioNet datasets, and the results are verified by comparing it with the classic DCNN, Genetic Algorithm optimized ELM (GA-ELM), Cuckoo Search optimized ELM (CS-ELM), and Whale Optimization Algorithm optimized ELM (WOA-ELM). The proposed approach outperforms other comparative benchmarks with 98.25 % and 99.11 % as ultimate accuracy on the COVID-Xray-5k and COVIDetectioNet datasets, respectively, and it led relative error to reduce as the amount of 1.75 % and 1.01 % as compared to a convolutional CNN. More importantly, the time needed for training deep ChOA-ELM is only 0.9474 milliseconds, and the overall testing time for 3100 images is 2.937 s.

A novel solution of using mixed reality in bowel and oral and maxillofacial surgical telepresence: 3D mean value cloning algorithm.

BACKGROUND AND AIM: Most of the mixed reality models used in the surgical telepresence are suffering from the discrepancies in the boundary area and spatial-temporal inconsistency due to the illumination variation in the video frames. The aim behind this work is to propose a new solution that helps produce the composite video by merging the augmented video of the surgery site and virtual hand of the remote expertise surgeon. The purpose of the proposed solution is to decrease the processing time and enhance the accuracy of merged video by decreasing the overlay and visualization error and removing occlusion and artefacts. METHODOLOGY: The proposed system enhanced mean-value cloning algorithm that helps to maintain the spatial-temporal consistency of the final composite video. The enhanced algorithm includes the three-dimensional mean-value coordinates and improvised mean-value interpolant in the image cloning process, which helps to reduce the sawtooth, smudging and discolouration artefacts around the blending region. RESULTS: The accuracy in terms of overlay error of the proposed solution is improved from 1.01 to 0.80 mm, whereas the accuracy in terms of visualization error is improved from 98.8% to 99.4%. The processing time is reduced to 0.173 s from 0.211 s. The processing time and the accuracy of the proposed solution are enhanced as compared to the state-of-art solution. CONCLUSION: Our solution helps make the object of interest consistent with the light intensity of the target image by adding the space distance that helps maintain the spatial consistency in the final merged video.

A novel visualization system of using augmented reality in knee replacement surgery: Enhanced bidirectional maximum correntropy algorithm.

BACKGROUND AND AIM: Image registration and alignment are the main limitations of augmented reality (AR)-based knee replacement surgery. This research aims to decrease the registration error, eliminate outcomes that are trapped in local minima to improve the alignment problems, handle the occlusion and maximize the overlapping parts. METHODOLOGY: Markerless image registration method was used for AR-based knee replacement surgery to guide and visualize the surgical operation. While weight least square algorithm was used to enhance stereo camera-based tracking by filling border occlusion in right-to-left direction and non-border occlusion from left-to-right direction. RESULTS: This study has improved video precision to 0.57-0.61 mm alignment error. Furthermore, with the use of bidirectional points, that is, forward and backward directional cloud point, the iteration on image registration was decreased. This has led to improve the processing time as well. The processing time of video frames was improved to 7.4-11.74 frames per second. CONCLUSIONS: It seems clear that this proposed system has focused on overcoming the misalignment difficulty caused by the movement of patient and enhancing the AR visualization during knee replacement surgery. The proposed system was reliable and favourable which helps in eliminating alignment error by ascertaining the optimal rigid transformation between two cloud points and removing the outliers and non-Gaussian noise. The proposed AR system helps in accurate visualization and navigation of anatomy of knee such as femur, tibia, cartilage, blood vessels and so forth.