A practical workshop for generating simple DNA fingerprints of plants.

Gel electrophoresis DNA fingerprints offer a graphical and visually appealing illumination of the similarities and differences between DNA sequences of different species and individuals. A polymerase chain reaction (PCR) and restriction digest protocol was designed to give high-school students the opportunity to generate simple fingerprints of plants thereby illustrating concepts and techniques in genetics and molecular biology. Three combinations of primers/restriction enzyme targeting chloroplast DNA were sufficient to generate patterns that enabled visual discrimination of plant species. The protocol was tested with a range of common fruit, vegetable, and herb plants that could be easily cultivated and handled in the laboratory. Toxic or hazardous materials such as ethidium bromide and liquid nitrogen were avoided. The protocol was validated as a university outreach workshop targeted at a group of up to 10 high-school students. In a teaching laboratory, students sampled plants, setup the PCR reaction and restriction digest using microliter pipettes, and loaded the digested samples on an agarose gel. The workshop was structured as 2 × 2.5-hour sessions on separate days. The main challenges stemmed from the speed and accuracy of pipetting, especially at the gel loading stage. Feedback from students was largely positive, with the majority reporting that they had both enjoyed and learnt from the experience.

Coordination chemistry of Rh(III) porphyrins: complexes with hydrazine, disulfide, and diselenide bridging ligands.

Rh(III) porphyrin complexes with bridging hydrazine and substituted hydrazine ligands were characterized in solution by (1)H NMR spectroscopy and in the solid state by X-ray diffraction. Addition of further ligand to these species afforded 1:1 complexes in which methylhydrazine and N,N-dimethylhydrazine preferentially bound to the Rh center through the substituted nitrogen atom, as evidenced by (1)H NMR chemical shifts. An alkylated Rh(III) porphyrin was isolated as a decomposition product of the reaction of N,N-dimethylhydrazine with Rh(III) porphyrin in the presence of light and oxygen. Me(2)Se(2) and Me(2)S(2) formed bridging and nonbridging complexes with Rh(III) porphyrin, analogous to that observed with N,N'-dimethylhydrazine.

Rh(III) porphyrins as building blocks for porphyrin coordination arrays: from dimers to heterometallic undecamers.

The coordination chemistry of a Rh(III) porphyrin building block was investigated with a view to the construction of heterometallic arrays of porphyrins. The Rh(III) porphyrin was found to coordinate methanol in the solid state and weakly in CDCl(3) solution. Crystallization afforded five coordinate pi stacked Rh(III) porphyrins. The distribution of products from reaction of Rh(III) porphyrin with DABCO, 4,4'-bipyridine, and 4,4'-bipyrimidine could be displaced toward dimeric species by silica gel column chromatography or recrystallization which served to remove excess ligand. Weak coordination to nitriles was observed, although it was sufficiently strong to organize a dimeric complex of 5,5'-dicyano-2,2'-bipyridine in the solid state. Complexes with 4,4'-bipyrimidine and 5,5'-dicyano-2,2'-bipyridine possess uncoordinated chelating nitrogen atoms. Larger heterometallic porphyrin arrays were assembled using a combination of Sn(IV) and Rh(III) porphyrin coordination chemistry. A Sn(IV) porphyrin acted as a core around which were coordinated two isonicotinate groups, carboxylic acid functionalized porphyrins, or porphyrin trimer dendrons. Rh(III) porphyrins were coordinated to pyridyl groups at the periphery of these entities. In this way an eleven porphyrin array, with four different porphyrin metalation states, was assembled. The diamagnetic nature of both the Rh(III) and Sn(IV) porphyrins, the slow ligand exchange kinetics on the NMR time scale, and tight ligand binding permitted the porphyrin arrays to be analyzed by two-dimensional (1)H NMR techniques.

Ion pair cooperative binding of potassium salts by new rhenium(I) bipyridine crown ether receptors.

The new rhenium(I) bipyridine crown ether receptors 1-4 have been prepared and their ion pair recognition properties examined. The crystal structure of [1.KCl](2).2H(2)O demonstrates that potassium is coordinated by benzo-18-crown-6 and chloride is hydrogen bonded to the amide groups. Receptor 3 extracts solid KCl and KOAc into chloroform via ion pair complexation. NMR and emission titration studies with receptors 1-4 and KCl/KOAc show that cobound potassium enhances anion binding strength by electrostatic and conformational effects. Significant cooperative interactions are observed between the anion and cation sites for host 4 in CH(3)CN. This molecule coordinates potassium to form a 1:1 intramolecular sandwich complex, which preorganizes the host for acetate binding.