Environmental habituation and sexual composition affect juveniles' shoaling activity in a cichlid fish (Pelvicachromis taeniatus).

Group living is widespread in animals, and many fishes form shoals. Examining within-group interactions in fishes may contribute to the general understanding of dynamic social structures in animals. The sex ratio of a group has been shown to influence grouping decisions of fishes and can be expected to affect behaviour at group level. Behavioural experiments usually involve relatively short acclimatisation times, although the establishment of environmental habituation in fishes is understudied. This study tests whether the sex ratio and long-term habituation to experimental conditions influence general shoal performance (activity parameters, density) and responses of shoals to an acoustic-mechanical disturbance cue in juveniles of the cichlid fish Pelvicachromis taeniatus via individual tracking. The disturbance consisted of a defined hit against the experimental tank, which caused sudden noise and water movement. We found that a higher proportion of females increases shoal activity (swimming speed and distance covered), suggesting that female P. taeniatus are more active than males. Furthermore, shoal activity declined when shoals habituated to the experimental settings and with the time that the shoals were grouped together, which may reflect intensified group member familiarity. Moreover, behavioural changes after disturbance were weaker when individuals were kept with their group longer and more familiar to the experimental conditions. For prey species, lower activity might be beneficial under natural conditions due to lower conspicuousness of the group. We did not find any significant effects of the investigated factors on shoal density (mean interindividual distance) and speed synchronisation. The results indicate that sexual composition, familiarity between shoal members and habituation to the experimental environment affect shoal performance in a cichlid fish.

Deletion of PrBP/delta impedes transport of GRK1 and PDE6 catalytic subunits to photoreceptor outer segments.

The mouse Pde6d gene encodes a ubiquitous prenyl binding protein, termed PrBP/delta, of largely unknown physiological function. PrBP/delta was originally identified as a putative rod cGMP phosphodiesterase (PDE6) subunit in the retina, where it is relatively abundant. To investigate the consequences of Pde6d deletion in retina, we generated a Pde6d(-/-) mouse by targeted recombination. Although manifesting reduced body weight, the Pde6d(-/-) mouse was viable and fertile and its retina developed normally. Immunocytochemistry showed that farnesylated rhodopsin kinase (GRK1) and prenylated rod PDE6 catalytic subunits partially mislocalized in Pde6d(-/-) rods, whereas rhodopsin was unaffected. In Pde6d(-/-) rod single-cell recordings, sensitivity to single photons was increased and saturating flash responses were prolonged. Pde6d(-/-) scotopic paired-flash electroretinograms indicated a delay in recovery of the dark state, likely due to reduced levels of GRK1 in rod outer segments. In Pde6d(-/-) cone outer segments, GRK1 and cone PDE6alpha' were present at very low levels and the photopic b-wave amplitudes were reduced by 70%. Thus the absence of PrBP/delta in retina impairs transport of prenylated proteins, particularly GRK1 and cone PDE, to rod and cone outer segments, resulting in altered photoreceptor physiology and a phenotype of a slowly progressing rod/cone dystrophy.

Detection sensitivity and temporal resolution of visual signals near absolute threshold in the salamander retina.

Several studies have suggested that the visual system can detect dim lights with a fidelity limited only by Poisson fluctuations in photon absorption and spontaneous activation of rhodopsin. If correct, this implies that neural processing of responses produced by rod photoreceptors is efficient and effectively noiseless. However, experimental uncertainty makes this conclusion tenuous. Furthermore, previous work provided no information about how accurately stimulus timing is represented. Here, the detection sensitivity and temporal resolution of salamander rods and retinal ganglion cells (RGCs) are compared in nearly matched experimental conditions by using recorded responses to identify the time of a flash. At detection threshold, RGCs could reliably signal the absorption of 20-50 photons, but the rods within the RGC receptive field could signal stimuli 3-10 times weaker. For flash strengths 10 times higher than detection threshold, some RGCs could distinguish stimulus timing with a resolution finer than 100 msec, within a factor of 2 of the rod limit. The relationship between RGC and rod sensitivity could not be explained by added noise in the retinal circuitry but could be explained by a threshold acting after pooling of rod signals. Simulations of rod signals indicated that continuous noise, rather than spontaneous activation of rhodopsin or fluctuations in the single-photon response, limited temporal resolution. Thus, detection of dim lights was limited by retinal processing, but, at higher light levels, synaptic transmission, cellular integration of synaptic inputs, and spike generation in RGCs faithfully conveyed information about the time of photon absorption.

Mathematical and computational modelling of spatio-temporal signalling in rod phototransduction.

Rod photoreceptors are activated by light through activation of a cascade that includes the G protein-coupled receptor rhodopsin, the G protein transducin, its effector cyclic guanosine monophosphate (cGMP) phosphodiesterase and the second messengers cGMP and Ca2+. Signalling is localised to the particular rod outer segment disc, which is activated by absorption of a single photon. Modelling of this cascade has previously been performed mostly by assumption of a well-stirred cytoplasm. We recently published the first fully spatially resolved model that captures the local nature of light activation. The model reduces the complex geometry of the cell to a simpler one using the mathematical theories of homogenisation and concentrated capacity. The model shows that, upon activation of a single rhodopsin, changes of the second messengers cGMP and Ca2+ are local about the particular activated disc. In the current work, the homogenised model is computationally compared with the full, non-homogenised one, set in the original geometry of the rod outer segment. It is found to have an accuracy of 0.03% compared with the full model in computing the integral response and a 5200-fold reduction in computation time. The model can reconstruct the radial time-profiles of cGMP and Ca2+ in the interdiscal spaces adjacent to the activated discs. Cellular electrical responses are localised near the activation sites, and multiple photons sufficiently far apart produce essentially independent responses. This leads to a computational analysis of the notion and estimate of 'spread' and the optimum distribution of activated sites that maximises the response. Biological insights arising from the spatio-temporal model include a quantification of how variability in the response to dim light is affected by the distance between the outer segment discs capturing photons. The model is thus a simulation tool for biologists to predict the effect of various factors influencing the timing, spread and control mechanisms of this G protein-coupled, receptor-mediated cascade. It permits ease of simulation experiments across a range of conditions, for example, clamping the concentration of calcium, with results matching analogous experimental results. In addition, the model accommodates differing geometries of rod outer segments from different vertebrate species. Thus it represents a building block towards a predictive model of visual transduction.

Temporal contrast adaptation in salamander bipolar cells.

This work investigates how the light responses of salamander bipolar cells adapt to changes in temporal contrast: changes in the depth of the temporal fluctuations in light intensity about the mean. Contrast affected the sensitivity of bipolar cells but not of photoreceptors or horizontal cells, suggesting that adaptation occurred in signal transfer from photoreceptors to bipolars. This suggestion was confirmed by recording from photoreceptor-bipolar pairs and observing a direct dependence of the gain of signal transfer on the contrast of the light input. After an increase in contrast, the onset of adaptation in the bipolar cell had a time constant of 1-2 sec, similar to a fast component of contrast adaptation in the light responses of retinal ganglion cells (Kim and Rieke, 2001). Contrast adaptation was mediated by processes in the dendrites of both on and off bipolars. The functional properties of adaptation differed for the two bipolar types, however, with contrast having a much more pronounced effect on the kinetics of the responses of off cells than on cells.

Temporal contrast adaptation in the input and output signals of salamander retinal ganglion cells.

We investigated how the light-evoked input and output signals of salamander retinal ganglion cells adapt to changes in temporal contrast, i.e., changes in the depth of the temporal fluctuations in the light intensity about the mean. Increasing the temporal contrast sped the kinetics and reduced the sensitivity of both the light-evoked input currents measured at the ganglion cell soma and the output spike trains of the cell. The decline in sensitivity of the input currents after an increase in contrast had two distinct kinetic components with fast (<2 sec) and slow (>10 sec) time constants. The recovery of sensitivity after a decrease in contrast was dominated by a single component with an intermediate (4-18 sec) time constant. Contrast adaptation differed for on and off cells, with both the kinetics and amplitude of the light-evoked currents of off cells adapting more strongly than those of on cells. Contrast adaptation in the input currents of a ganglion cell, however, was unable to account for the extent of adaptation in the output spike trains of the cell, indicating that mechanisms intrinsic to the ganglion cell contributed. Indeed, when fluctuating currents were injected into a ganglion cell, the sensitivity of spike generation decreased with increased current variance. Pharmacological experiments indicated that adaptation of spike generation to the current variance was attributable to properties of tetrodotoxin-sensitive Na(+) channels.

Origin and functional impact of dark noise in retinal cones.

Spontaneous fluctuations in the electrical signals of the retina's photoreceptors impose a fundamental limit on visual sensitivity. While noise in the rods has been studied extensively, relatively little is known about the noise of cones. We show that the origin of the dark noise in salamander cones varies with cone type. Most of the noise in long wavelength-sensitive (L) cones arose from spontaneous activation of the photopigment, which is a million-fold less stable than the rod photopigment rhodopsin. Most of the noise in short wavelength-sensitive (S) cones arose in a later stage of the transduction cascade, as the photopigment was relatively stable. Spontaneous pigment activation effectively light adapted L cones in darkness, causing them to have a smaller and briefer dim flash response than S cones.

Mechanisms of single-photon detection in rod photoreceptors.

Rod photoreceptors detect and encode incident photons exceptionally well. They collect sparse photons with high efficiency, maintain a low dark noise, and generate reproducible responses to each absorbed photon. The mechanisms involved in single-photon detection--control of the effective lifetime of a single active receptor molecule, amplification of the activity of this single molecule by a second-messenger cascade, and reliable transmission of small synaptic signals--recur throughout the nervous system. Indeed, several other sensory systems reach or approach limits set by quantization of their input signals. For example, olfactory receptors can detect single odorant molecules. Although our understanding of visual transduction and signal processing has advanced rapidly during the past 10-15 years, fundamental questions still remain: What mechanisms are responsible for the reproducibility of the rod's elementary response? What are the tradeoffs of speed and sensitivity in the transduction cascade? How are the rod single-photon responses reliably transmitted to the rest of the visual system? Future technical innovations, particularly better methods to monitor the activity of intermediate steps in transduction, will play an important role in providing answers.

Origin of reproducibility in the responses of retinal rods to single photons.

The single photon responses of retinal rod cells are remarkably reproducible, allowing the number and timing of photon absorptions to be encoded accurately. This reproducibility is surprising because the elementary response arises from a single rhodopsin molecule, and typically signals from single molecules display large intertrial variations. We have investigated the mechanisms that make the rod's elementary response reproducible. Our experiments indicate that reproducibility cannot be explained by saturation within the transduction cascade, by Ca2+ feedback, or by feedback control of rhodopsin shutoff by any known element of the cascade. We suggest instead that deactivation through a series of previously unidentified transitions allows the catalytic activity of a single rhodopsin molecule to decay with low variability. Two observations are consistent with this view. First, the time course of rhodopsin's catalytic activity could not be accounted for by the time required for the known steps in rhodopsin deactivation-phosphorylation and arrestin binding. Second, the variability of the elementary response increased when phosphorylation was made rate-limiting for rhodopsin shutoff.

Molecular origin of continuous dark noise in rod photoreceptors.

Noise in the rod photoreceptors limits the ability of the dark-adapted visual system to detect dim lights. We investigated the molecular mechanism of the continuous component of the electrical dark noise in toad rods. Membrane current was recorded from intact, isolated rods or truncated, internally dialyzed rod outer segments. The continuous noise was separated from noise due to thermal activation of rhodopsin and to transitions in the cGMP-activated channels. Selectively disabling different elements of the phototransduction cascade allowed examination of their contributions to the continuous noise. These experiments indicate that the noise is generated by spontaneous activation of cGMP phosphodiesterase (PDE) through a process that does not involve transducin. The addition of recombinant gamma, the inhibitory subunit of PDE, did not suppress the noise, indicating that endogenous gamma does not completely dissociate from the catalytic subunit of PDE during spontaneous activation. Quantitative analysis of the noise provided estimates of the rate constants for spontaneous PDE activation and deactivation and the catalytic activity of a single PDE molecule in situ.

Asynchronous transmitter release: control of exocytosis and endocytosis at the salamander rod synapse.

1. We have studied exocytosis and endocytosis in the synaptic terminal of salamander rods using a combination of Ca2+ imaging, capacitance measurement and the photolysis of Ca2+ buffers. 2. The average cytoplasmic Ca2+ concentration at the dark resting potential was 2-4 microM. 3. An average cytoplasmic Ca2+ concentration of 2-4 microM maintained a high rate of continuous exocytosis and endocytosis. 4. Changes in the rate of exocytosis were followed in less than 0.7 s by compensatory changes in the rate of endocytosis. 5. Vesicle cycling in the rod synapse is specialized for graded transmission and differs from that previously described for synapses that release synchronized bursts of transmitter.

Naturalistic stimuli increase the rate and efficiency of information transmission by primary auditory afferents.

Natural sounds, especially communication sounds, have highly structured amplitude and phase spectra. We have quantified how structure in the amplitude spectrum of natural sounds affects coding in primary auditory afferents. Auditory afferents encode stimuli with naturalistic amplitude spectra dramatically better than broad-band stimuli (approximating white noise); the rate at which the spike train carries information about the stimulus is 2-6 times higher for naturalistic sounds. Furthermore, the information rates can reach 90% of the fundamental limit to information transmission set by the statistics of the spike response. These results indicate that the coding strategy of the auditory nerve is matched to the structure of natural sounds; this 'tuning' allows afferent spike trains to provide higher processing centres with a more complete description of the sensory world.

A cGMP-gated current can control exocytosis at cone synapses.

The voltage-gated Ca2+ current in cone photoreceptors operates over only a small part of the physiological voltage range produced by light and, consequently, appears insufficient for controlling transmitter release. We have used a whole-cell voltage clamp to measure membrane current and the capacitance change produced by exocytosis in solitary cone and rod photoreceptors isolated from the salamander retina. In both types of photoreceptor, Ca2+ influx through voltage-gated Ca2+ channels initiated exocytosis. In addition, Ca2+ influx through a cGMP-gated channel in the inner segment and synaptic processes of cones also initiated exocytosis. The cGMP-gated current sustained exocytosis over the entire physiological voltage range.

Reliability and information transmission in spiking neurons.

Spiking neurons encode continuous, time-varying signals in sequences of identical action potentials. Relatively simple algorithms allow one to 'decode' this neural representation of sensory data to estimate the input signals. Decoding experiments provide a quantitative characterization of information transmission and computational reliability under real-time conditions. The results of these studies show that neural coding and computation in several systems approach fundamental physical and informational theoretic limits to performance.

Reading a neural code.

Traditional approaches to neural coding characterize the encoding of known stimuli in average neural responses. Organisms face nearly the opposite task--extracting information about an unknown time-dependent stimulus from short segments of a spike train. Here the neural code was characterized from the point of view of the organism, culminating in algorithms for real-time stimulus estimation based on a single example of the spike train. These methods were applied to an identified movement-sensitive neuron in the fly visual system. Such decoding experiments determined the effective noise level and fault tolerance of neural computation, and the structure of the decoding algorithms suggested a simple model for real-time analog signal processing with spiking neurons.