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PLoS One ; 10(2): e0118288, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-25700273

RESUMO

Relating a gene mutation to a phenotype is a common task in different disciplines such as protein biochemistry. In this endeavour, it is common to find false relationships arising from mutations introduced by cells that may be depurated using a phenotypic assay; yet, such phenotypic assays may introduce additional false relationships arising from experimental errors. Here we introduce the use of high-throughput DNA sequencers and statistical analysis aimed to identify incorrect DNA sequence-phenotype assignments and observed that 10-20% of these false assignments are expected in large screenings aimed to identify critical residues for protein function. We further show that this level of incorrect DNA sequence-phenotype assignments may significantly alter our understanding about the structure-function relationship of proteins. We have made available an implementation of our method at http://bis.ifc.unam.mx/en/software/chispas.


Assuntos
DNA/análise , Proteínas/genética , Análise de Sequência de DNA/métodos , Interface Usuário-Computador , Sequenciamento de Nucleotídeos em Larga Escala/normas , Internet , Mutagênese , Fenótipo , Proteínas/química , Proteínas/metabolismo , Controle de Qualidade , Análise de Sequência de DNA/normas
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