Melatonin differentially refines the metabolome to improve seed formation during grain developmental stages and enhances yield in two contrasting rice cultivars, grown in arsenic-contaminated soil.

The manuscript revealed the ameliorative effects of exogenous melatonin in two distinct reproductive stages, i.e., developing grains (20 days after pollination) and matured grains (40 days after pollination) in two contrasting indica rice genotypes, viz., Khitish (arsenic-susceptible) and Muktashri (arsenic-tolerant), irrigated with arsenic-contaminated water throughout their life-cycle. Melatonin administration improved yield-related parameters like rachis length, primary and secondary branch length, number of grains per panicle, number of filled and empty grains per panicle, grain length and breadth and 1000-grain per weight. Expression of GW2, which negatively regulates grain development, was suppressed, along with concomitant induction of positive regulators like GIF1, DEP1 and SPL14 in both Khitish and Muktashri. Melatonin lowered arsenic bioaccumulation in grains and tissue biomass, more effectively in Khitish. Unregulated production of reactive oxygen species, leading to cellular necrosis caused by arsenic, was reversed in presence of melatonin. Endogenous melatonin level was stimulated due to up-regulation of the key biosynthetic genes, SNAT and ASMT. Melatonin enhanced the production of diverse antioxidants like anthocyanins, flavonoids, total phenolics and ascorbic acid and also heightened the production of thiol-metabolites (cysteine, reduced glutathione, non-protein thiols and phytochelatin), ensuring effective chelation and arsenic detoxification. Altogether, our observation, supported by principal component analysis, proved that melatonin re-programs the antioxidative metabolome to enhance plant resilience against arsenic stress to mitigate oxidative damages and reduce arsenic translocation from the soil to tissue biomass and edible grains.

The molecular paradigm of reactive oxygen species (ROS) and reactive nitrogen species (RNS) with different phytohormone signaling pathways during drought stress in plants.

Drought is undoubtedly a major environmental constraint that negatively affects agricultural yield and productivity throughout the globe. Plants are extremely vulnerable to drought which imposes several physiological, biochemical and molecular perturbations. Increased generation of reactive oxygen species (ROS) and reactive nitrogen species (RNS) in different plant organs is one of the inevitable consequences of drought. ROS and RNS are toxic byproducts of metabolic reactions and poise oxidative stress and nitrosative stress that are detrimental for plants. In spite of toxic effects, these potentially active radicals also play a beneficial role in mediating several signal transduction events that lead to plant acclimation and enhanced survival under harsh environmental conditions. The precise understanding of ROS and RNS signaling and their molecular paradigm with different phytohormones, such as auxin, gibberellin, cytokinin, abscisic acid, ethylene, brassinosteroids, strigolactones, jasmonic acid, salicylic acid and melatonin play a pivotal role for maintaining plant fitness and resilience to counteract drought toxicity. Therefore, the present review provides an overview of integrated systemic signaling between ROS, RNS and phytohormones during drought stress based on past and recent advancements and their influential role in conferring protection against drought-induced damages in different plant species. Indeed, it would not be presumptuous to hope that the detailed knowledge provided in this review will be helpful for designing drought-tolerant crop cultivars in the forthcoming times.

Deciphering the biochemical regulation of metabolic pathways in abating stress-induced damages during co-exposure of arsenic and fluoride in a non-aromatic and an aromatic rice variety.

The aim of the current work was to decipher the systemic damage and biochemical defense machinery due to combined arsenic (5 mg L-1 Na3AsO4) and fluoride (50 mg L-1 NaF) stress in two rice cultivars viz., IR-64 (non-aromatic) and Gobindobhog (aromatic), grown for 14 days, under 16/8 h light/dark photoperiodic cycle at 32 °C. Higher accumulation of arsenic and fluoride in Gobindobhog generated higher levels of H2O2 that caused higher electrolyte leakage, along with malondialdehyde and methylglyoxal formation. Higher oxidative damages severely compromised seed germination and led to chlorophyll loss, inhibition of root and shoot growth and fresh and dry weight of the seedlings. On the contrary, oxidative damage was less pronounced in IR-64, as compared to that of Gobindobhog, which can be attributed to higher accumulation of protective metabolites, i.e., osmolytes and antioxidants. Higher levels of osmolytes (proline, glycine betaine and amino acids) in IR-64 helped in maintaining the osmotic balance of the cells and the integrity of the cell membrane. Additionally, up regulated activity of enzymatic antioxidants (catalase, superoxide dismutase, ascorbate peroxidase, glutathione peroxidase and glutathione S-transferase) along with elevated levels of non-enzymatic antioxidants (flavonoids, phenolics, xanthophylls and carotenoids) played a pivotal role in controlling oxidative damages and strengthening the defense machinery in IR-64, as compared to that of Gobindobhog where lesser enhancement in the level of the above mentioned protective metabolites was noted. The present work illustrated differential phytotoxicity in rice seedlings and elucidated the yet uncharacterized biohazard associated with arsenic and fluoride co-contamination, with better adaptive features of IR-64, compared to Gobindobhog, which appeared as the sensitive variety.

Abscisic acid in plants under abiotic stress: crosstalk with major phytohormones.

KEY MESSAGE: Extensive crosstalk exists among ABA and different phytohormones that modulate plant tolerance against different abiotic stress. Being sessile, plants are exposed to a wide range of abiotic stress (drought, heat, cold, salinity and metal toxicity) that exert unwarranted threat to plant life and drastically affect growth, development, metabolism, and yield of crops. To cope with such harsh conditions, plants have developed a wide range of protective phytohormones of which abscisic acid plays a pivotal role. It controls various physiological processes of plants such as leaf senescence, seed dormancy, stomatal closure, fruit ripening, and other stress-related functions. Under challenging situations, physiological responses of ABA manifested in the form of morphological, cytological, and anatomical alterations arise as a result of synergistic or antagonistic interaction with multiple phytohormones. This review provides new insight into ABA homeostasis and its perception and signaling crosstalk with other phytohormones at both molecular and physiological level under critical conditions including drought, salinity, heavy metal toxicity, and extreme temperature. The review also reveals the role of ABA in the regulation of various physiological processes via its positive or negative crosstalk with phytohormones, viz., gibberellin, melatonin, cytokinin, auxin, salicylic acid, jasmonic acid, ethylene, brassinosteroids, and strigolactone in response to alteration of environmental conditions. This review forms a basis for designing of plants that will have an enhanced tolerance capability against different abiotic stress.

Bio-priming with a Novel Plant Growth-Promoting Acinetobacter indicus Strain Alleviates Arsenic-Fluoride Co-toxicity in Rice by Modulating the Physiome and Micronutrient Homeostasis.

Sustainable remediation of arsenic-fluoride from rice fields through efficient bio-extraction is the need of the hour, since these toxicants severely challenge safe cultivation of rice and food biosafety. In the present study, we screened an arsenic-fluoride tolerant strain AB-ARC of Acinetobacter indicus from the soil of a severely polluted region of West Bengal, India, which was capable of efficiently removing extremely high doses of arsenate and fluoride from the media. The strain also behaved as a plant growth-promoting rhizobacterium, since it could produce indole-3-acetic acid and solubilize phosphate, zinc, and starch. Due to these properties of the identified strain, it was used for bio-priming the seeds of the arsenic-fluoride susceptible rice cultivar, Khitish for testing the efficacy of the AB-ARC strain to promote combined arsenic-fluoride tolerance in the rice genotype. Bio-priming with AB-ARC led to accelerated uptake of crucial elements like iron, copper, and nickel which behave as co-factors of physiological and antioxidative enzymes. Thus, the activation of superoxide dismutase, catalase, guaiacol peroxidase, glutathione peroxidase, and glutathione-S-transferase enabled detoxification of reactive oxygen species (ROS) and reduction of the oxidative injuries like malondialdehyde and methylglyoxal generation. Overall, due to ameliorated molecular damages and low uptake of the toxic xenobiotics, the plants were able to maintain improved growth vigor and photosynthesis, as evident from the elevated levels of Hill activity and chlorophyll content. Hence, bio-priming with the A. indicus AB-ARC strain may be advocated for sustainable rice cultivation in arsenic-fluoride co-polluted fields.

Dissecting the biochemical and molecular-genetic regulation of diverse metabolic pathways governing aroma formation in indigenous aromatic indica rice varieties.

BACKGROUND: Aromatic rice is characterized by its distinct flavor and fragrance, imparted by more than 200 volatile organic compounds. The desirable trait of aroma relies on the type of the variety, with some varieties exhibiting considerably higher aroma content. This prompted us to undergo an exhaustive study of the aroma-associated biochemical pathways and expression of related genes, encoding the enzymes involved in those pathways in indigenous aromatic rice cultivars. METHODS AND RESULTS: The higher aroma level in aromatic rice varieties was attributed to higher transcript levels of PDH, P5CS, OAT, ODC, DAO and TPI, but lower P5CDH and BADH2, as revealed by comparative expression profiling of genes in 11 aromatic and four non-aromatic varieties. Some of the high-aroma containing varieties exhibited lower expression of SPDS and SPMS genes, concomitant with higher PAO expression. Protein immunoblot analyses showed lesser BADH2 protein accumulation in the aromatic varieties. The involvement of shikimate pathway in aroma formation was justified by higher levels of shikimic and ferulic acids due to higher expression of SK1, SK2 and ARD genes. The aromatic varieties exhibited higher expression of LOX3 and HPL, with higher corresponding enzyme activity, accompanied with lower accumulation of lipid hydroperoxides and higher level of total terpenoids, signifying the role of oxylipin pathway and terpene-related volatiles in aroma formation. The pattern of transcript level and metabolite accumulation followed the same trend in both vegetative (seedling) and reproductive (seed) tissues. Sequence analyses revealed several mutations in the upstream region and different exons and introns of BADH2 in the examined aromatic varieties. The allele specific marker system acted as fingerprint to distinguish the selected aromatic rice varieties. The cleaved amplified polymorphic sequence marker established the absence of any mutation in the 14th exon of BADH2 in the aromatic varieties. CONCLUSION: The present work clearly highlighted the biochemical and molecular-genetic mechanism of differential aroma levels which could be attributed to differential regulation of metabolites and genes, belonging to 2-acetyl-1-pyrroline, shikimate, oxylipin and terpenoid metabolic pathways in the indigenous aromatic rice varieties.

Salicylic acid-mediated alleviation of fluoride toxicity in rice by restricting fluoride bioaccumulation and strengthening the osmolyte, antioxidant and glyoxalase systems.

The aim of the manuscript was to demonstrate the efficacy of salicylic acid (SA) in abrogating the fluoride-induced oxidative damages in the susceptible rice cultivar, MTU1010. Prolonged exposure of seedlings to sodium fluoride (25 mg L-1) severely impaired growth and overall physiological parameters like germination percentage, biomass and root and shoot length and incited the formation of hydrogen peroxide that enhanced electrolyte leakage, formation of cytotoxic products like malondialdehyde and methylglyoxal and lipoxygenase activity. Exogenous application of SA (0.5 mM) enhanced the endogenous level of SA that restored the chlorophyll content and catalase activity and further escalated the activity of other enzymatic antioxidants (superoxide dismutase, guaiacol peroxidase, ascorbate peroxidase, glutathione peroxidase and glutathione S-transferase), formation of non-enzymatic antioxidants (anthocyanins, carotenoids, flavonoids, phenolics, ascorbate and reduced glutathione) and osmolytes (proline, amino acids and glycine betaine) that cumulatively maintained the integrity of membrane structure and homeostatic balance of the cells by scavenging the accumulated hydrogen peroxide. SA-mediated formation of proline and flavonoids was linked with the enhanced activity of Δ1-pyrroline-5-carboxylate synthetase and phenylalanine ammonia lyase. Fluoride stress enhanced the activity of enzymes like glyoxalase I and glyoxalase II which were further aggravated in the seedlings upon treatment with SA, effectively detoxifying the methylglyoxal formed during stress. Overall, the manuscript depicts the pivotal role played by exogenous SA in ameliorating the effects of fluoride-induced damages in the seedlings and proves its potentiality as a protective chemical against fluoride stress when applied exogenously in rice.

Extensive cross-talk among stress-regulated protective metabolites, biogenic-amines and phytohormone-signalling, co-ordinated by dopamine-mediated seed-priming, governs tolerance against fluoride stress in rice.

KEY MESSAGE: Seed priming with dopamine reduced fluoride bioaccumulation, induced endogenous dopamine level, thereby orchestrating phytohormone homeostasis and biogenic amine metabolism, and modulating osmolyte and antioxidant machinery to enhance fluoride tolerance in rice. The aim of this study was to decipher the efficacy of seed priming with dopamine in curtailing the adverse impacts of fluoride toxicity in rice seedlings. Fluoride-stressed seedlings exhibited severe growth retardation, high fluoride bioaccumulation, electrolyte leakage and marked cellular injuries. Dopamine priming stimulated the overall physiological growth parameters during stress, via reduced formation of H2O2, malondialdehyde and methylglyoxal, due to lesser fluoride-accumulation. Fluoride stress-induced endogenous dopamine level was further induced upon dopamine priming, marked by the up regulated DOPA decarboxylase expression. Additionally, dopamine treatment led to escalated activity of catalase, superoxide dismutase and glutathione peroxidase in the stressed seedlings, concomitant with altered CAT, SOD and GPX expression. The higher accumulation of protective osmolytes (proline and total amino acids) and non-enzymatic antioxidants (phenolics, flavonoids, anthocyanins, glutathione and carotenoids), upon dopamine priming, during fluoride stress, could be linked with the altered expression pattern of the respective genes. Dopamine promoted active utilization of the biogenic amine (polyamines and ϒ-amino butyric acid) pools for toxicity mitigation, correlated with the modulation of the concerned enzyme activity and gene expression. Dopamine stimulated the accumulation of phytohormones like gibberellin and salicylic acid, via inducing the biosynthetic genes like gibberellin-3-oxidase (GA3ox) and isochorismate synthase (ICS), respectively, while depreciating the abscisic acid and melatonin level during fluoride stress. To our knowledge, this is the first documented report for the remedial role of dopamine priming against fluoride stress in any plant species. This study will open new arenas in sustainable agriculture for the exploitation of this pulsating biomolecule against fluoride stress.

Rhizofiltration of combined arsenic-fluoride or lead-fluoride polluted water using common aquatic plants and use of the 'clean' water for alleviating combined xenobiotic toxicity in a sensitive rice variety.

Groundwater co-contamination with toxic pollutants like arsenic-fluoride or lead-fluoride is a serious threat for safe rice cultivation, since major stretches of land, involved in cultivation of this staple food crop are presently experiencing severe endemic pollution from these xenobiotic combinations. Preliminary investigations established that the combined pollutants together exerted more phytotoxicity in the widely cultivated indica rice variety Khitish, compared with that exerted by the individual contaminants. Thus, an ecologically sustainable and economically viable phytoremediative strategy was designed where three aquatic plants, viz., Azolla (water fern), Pistia (water lettuce) and Eichhornia (water hyacinth) (commonly located across the co-polluted regions) were tested for their ability to rhizofiltrate the water samples that had been polluted with arsenic-fluoride or lead-fluoride. Water lettuce exhibited the highest ability to 'clean' both arsenic-fluoride and lead-fluoride polluted water due to its capacity of efficient phytoextraction and phytostabilization. Irrigation of Khitish seedlings with this de-polluted water appreciably reduced malondialdehyde formation, electrolyte leakage and irreversible protein carbonylation due to suppression in NADPH oxidase activity and reactive oxygen species production, compared with those in sets grown with non-treated, arsenic-fluoride or lead-fluoride contaminated water. Oxidative injuries, cytotoxic methylglyoxal synthesis and inhibition of biomass growth were ameliorated, and chlorophyll synthesis and Hill activity were increased due to reduced bioaccumulation of xenobiotics, along with the improved uptake of vital micronutrients like iron, copper and nickel. Overall, the current investigation illustrated a cheap, farmer-friendly blueprint which could be easily promulgated to ensure safe rice cultivation even across territories that are severely co-polluted with the mixed contaminants.

Fluoride tolerance in rice is negatively regulated by the 'stress-phytohormone' abscisic acid (ABA), but promoted by ABA-antagonist growth regulators, melatonin, and gibberellic acid.

The present manuscript aimed at investigating whether abscisic acid (ABA) promotes fluoride tolerance, similar to inciting salt adaptation in rice. Seeds of three salt-tolerant rice genotypes were maintained at 32 °C under 16/8 h light/dark photoperiodic cycle with 700 µmol photons m-2 s-1 intensity and 50% relative humidity in a plant growth chamber for 20 days. Suppressed ABA biosynthesis, and downregulated expression of ABA-inducible genes like Rab16A, Osem, and TRAB1 triggered NaCl-induced growth inhibition and physiological injuries like chlorophyll degradation, electrolyte leakage, formation of H2O2, malondialdehyde, and methylglyoxal in Matla. Reduced ABA accumulation increased the levels of melatonin and gibberellic acid in NaF (50 mg L-1)-stressed Nonabokra and Matla, which altogether promoted fluoride tolerance. Higher ABA content in NaF-stressed Jarava stimulated fluoride uptake via chloride channels, thus exhibiting severe fluoride susceptibility, in spite of higher production of ABA-associated osmolytes like proline, glycine-betaine and polyamines via the concerted action of genes like PDH, ADC, ODC, SAMDC, SPDS, SPMS, DAO, and PAO. Increased accumulation of compatible solutes in presence of high endogenous ABA promoted salt tolerance in Jarava; the same was insufficient to ameliorate fluoride-induced injuries in this cultivar. Treatment with ABA biosynthetic inhibitor, Na2WO4 promoted fluoride tolerance in Jarava, whereas further supplementation with exogenous ABA resulted in reversion back to fluoride-susceptible phenotype. Our work clearly established that ABA cannot always be considered as a 'universal' stress hormone as known in literature, since it acts as a negative regulator of fluoride tolerance which is more tightly regulated in rice via melatonin- and gibberellic acid-dependent pathways in ABA-independent manner.

Explicating the cross-talks between nanoparticles, signaling pathways and nutrient homeostasis during environmental stresses and xenobiotic toxicity for sustainable cultivation of cereals.

Precision farming using nanoparticles is a cutting-edge technology for safe cultivation of crop plants in marginal areas afflicted with environmental/climatic stresses like salinity, drought, extremes of temperature, ultraviolet B stress or polluted with xenobiotics like toxic heavy metals and fluoride. Major cereal crops like rice, wheat, maize, barley, sorghum and millets which provide the staple food for the entire global population are mainly glycophytes and are extremely susceptible to abiotic stress-induced oxidative injuries. Nanofertilization/exogenous spraying of beneficial nanoparticles alleviates the oxidative damages in cereals by altering the homeostasis of phytohormones like abscisic acid, gibberellins, cytokinins, auxins, salicylic acid, jasmonic acid and melatonin and by triggering the synthesis of gasotransmitter nitric oxide. Signaling cross-talks of nanoparticles with plant growth regulators enable activation of the defence machinery, comprising of antioxidants, thiol-rich compounds and glyoxalases and restrict xenobiotic mobilization by suppressing the expression of associated transporters. Accelerated nutrient uptake and grain biofortification under the influence of nanoparticles result in optimum crop productivity under sub-optimal conditions. However, over-dosing of even beneficial nanoparticles promotes severe phytotoxicity. Hence, the concentration of nanoparticles and mode of administering need to be thoroughly standardized before large-scale field applications, to ensure sustainable cereal cultivation with minimum ecological imbalance.

Crosstalk among plant growth regulators and signaling molecules during biotic and abiotic stresses: molecular responses and signaling pathways.

KEY MESSAGE: Plant stress responses are extremely sophisticated which implicate changes at the cellular, physiological and transcriptome levels by activating specific gene expression related to the challenges faced by plants.

Phytohormones, plant growth regulators and signaling molecules: cross-talk and stress responses.

KEY MESSAGE: Interactions of phytohormone signaling pathways and their crosstalk with the different intermediates of cell signaling cascades regulate the molecular stress responses in plants.

Gene regulation at transcriptional and post-transcriptional levels to combat salt stress in plants.

Soil salinity is a major challenge that will be faced more and more by human population in the near future. Higher salt concentrations in the soil limit the growth and production of crops, which poses serious threats to global food production. Various plant breeding approaches have been followed in the past which are reported to reduce the effect of salt stress by inducing the level of protective metabolites like osmolytes and antioxidants. Conventional breeding approaches are time-consuming and not cost-effective. In recent times, genetic engineering has been largely followed to confer salt tolerance through introgressions of single transgenes or stacking multiple transgenes. However, most of such works are limited only at the laboratory level and field trials are still awaited to prove the long-term efficacy of such transgenics. In this review, we attempt to present a broad overview of the current strategies undertaken to develop halophytic and salt-tolerant crops. The salt-induced damages in the plants are highlighted, followed by representing the novel traits, associated with salt stress, which can be used for engineering salt tolerance in glycophytic crops. Additionally, the role of transcriptional and epigenetic regulation in plants for amelioration of salt-induced damages has been reviewed. The role of post-transcriptional mechanisms such as microRNA regulation, genome editing and alternative splicing, during salt stress, and their implications in the development of salt-tolerant crops are also discussed. Finally, we present a short overview about the role of ion transporters and rhizobacteria in the engineering of salt tolerance in crop species.

Functional and molecular characterization of fluoride exporter (FEX) from rice and its constitutive overexpression in Nicotiana benthamiana to promote fluoride tolerance.

KEY MESSAGE: Early induction of OsFEX was insufficient for fluoride adaptation in IR-64. Overexpression of OsFEX in yeast and Nicotiana benthamiana enhanced fluoride tolerance. The present study delineates the regulation of fluoride exporter (FEX) in the fluoride-sensitive rice cultivar, IR-64 and its efficacy in generating high fluoride tolerance in transgenic Nicotiana benthamiana. Gene and protein expression profiling revealed that OsFEX exhibited early induction during fluoride stress in the vegetative and reproductive tissues of IR-64, although the expression was suppressed upon prolonged stress treatment. Analysis of OsFEX promoter in transgenic N. benthamiana, using ß-glucuronidase reporter assay confirmed its early inducible nature, since the reporter expression and activity peaked at 12 h of NaF stress, after which it was lowered. OsFEX expression was up regulated in the presence of gibberellic acid (GA) and melatonin, while it was suppressed by abscisic acid (ABA). Complementation of ΔFEX1ΔFEX2 yeast mutants with OsFEX enabled high fluoride tolerance, thus validating the functional efficiency of the transgene. Bioassay of transgenic N. benthamiana lines, expressing OsFEX either under its own promoter or under CaMV35S promoter, established that constitutive overexpression, rather than early induction of OsFEX was essential and crucial for generating fluoride tolerance in the transgenics. Overall, the suppression of OsFEX in the later growth phases of stressed IR-64 due to enhanced ABA conservation and lowered synthesis of GA, as supported by the application of the respective phytohormone biosynthetic inhibitors, such as sodium tungstate and paclobutrazol, accounted for the fluoride-hyperaccumulative nature of the rice cultivar.

Exogenous melatonin regulates endogenous phytohormone homeostasis and thiol-mediated detoxification in two indica rice cultivars under arsenic stress.

KEY MESSAGE: Melatonin enhanced arsenic (As) tolerance by inhibiting As bioaccumulation, modulating the expression of As transporters and phytohormone homeostasis, leading to efficient utilization of thiol machinery for sequestration and detoxification of this toxic metalloid. The present study was aimed at investigating the influence of exogenous melatonin on the regulation of endogenous plant growth regulators and their cumulative effects on metal(loid)-binding ligands in two contrasting indica rice cultivars, viz., Khitish (arsenic sensitive) and Muktashri (arsenic tolerant) under arsenic stress. Melatonin supplementation ameliorated arsenic-induced perturbations by triggering endogenous levels of gibberellic acid and melatonin, via up-regulating the expression of key biosynthetic genes like GA3ox, TDC, SNAT and ASMT. The endogenous abscisic acid content was also enhanced upon melatonin treatment by induced expression of the key anabolic gene, NCED3 and concomitant suppression of ABA8ox1. Enhanced melatonin content induced accumulation of higher polyamines (spermidine and spermine), together with up-regulation of SPDS and SPMS in Khitish, thereby modulating stress condition. On the contrary, melatonin escalated putrescine and spermidine levels in Muktashri, via enhanced expression of ADC and SAMDC. The role of melatonin appeared to be more prominent in Khitish, as evident from better utilization of thiol components like cysteine, GSH, non-protein thiols and phytochelatins, with higher GSH/GSSG ratio, despite down-regulated expression of corresponding thiol-metabolic genes (OsMT2 and OsPCS1) to deal with arsenic toxicity. The extent of arsenic bioaccumulation, which was magnified several folds, particularly in Khitish, was decreased upon melatonin application. Overall, our observation highlighted the fact that melatonin enhanced arsenic tolerance by inhibiting arsenic bioaccumulation, via modulating the expression levels of selected arsenic transporters (OsNramp1, OsPT2, OsPT8, OsLsi1) and controlling endogenous phytohormone homeostasis, leading to efficient utilization of thiol machinery for sequestration and detoxification of this toxic metalloid.

Transcript profiling of stress-responsive genes and metabolic changes during salinity in indica and japonica rice exhibit distinct varietal difference.

In the present study, we carried out comprehensive transcript profiling of diverse genes under salinity (200 mM NaCl) at different time points, accompanied by certain biochemical alterations of the indica (IR-64 and Pokkali) and japonica (Nipponbare and M-202) rice. The higher susceptibility of Nipponbare and IR-64 was reflected by lower relative water content, chlorophyll loss, higher malondialdehyde content, and accumulation of H2 O2 , and reduced nitrate reductase activity, compared to M-202 and Pokkali, where such changes were less pronounced. Enhanced levels of anthocyanins and reduced glutathione, together with elevated phenylalanine ammonia lyase activity, mainly conferred protection to Nipponbare and IR-64, while metabolites like phenolics, flavonoids, proline, and polyamines were more induced in M-202 and Pokkali. Varietal differences in the expression pattern of diverse groups of genes during different durations (6, 24, and 48 h) of stress were striking. A gene showing early induction for a particular variety exhibited a delayed induction in another variety or a gradually decreased expression with treatment time. Pokkali was clearly identified as the salt-tolerant genotype among the examined varieties based on increased antioxidant potential and enhanced expression of genes encoding for PAL, CHS, and membrane transporters like SOS3, NHX-1, and HKT-1. The results presented in this work provide insight into the complex varying regulation patterns for different genes across the investigated rice varieties in providing salt tolerance and highlights distinct differences in expression patterns between susceptible and tolerant indica and japonica rice.

Maghemite nano-fertilization promotes fluoride tolerance in rice by restoring grain yield and modulating the ionome and physiome.

The present manuscript elucidated the ameliorative potential of nano-maghemite (FeNPs) against the hazardous effects of fluoride toxicity in the sensitive rice cultivar, IR-64. Fluoride pollution triggered bioaccumulation in root, shoot and spikelets which inhibited reproduction, agronomic development and mineral uptake. Suppressed activity of enzymatic antioxidants and excessive cobalt translocation manifested severe ROS-induced oxidative injuries. Seedling priming with FeNPs reduced fluoride bioaccumulation and promoted efficient uptake of macroelements and micronutrients like potassium, calcium, iron, zinc, copper, nickel, manganese, selenium and vanadium and reduced the translocation of cobalt in mature seedlings during stress. This altogether triggered growth and activated the enzymes like SOD, CAT, APX and GPOX. High accumulation of non-enzymatic antioxidants like proline, anthocyanins, flavonoids, phenolics along with stimulated GSH synthesis (determined from high GR, GST and GPX activity) and glyoxalase activity enabled FeNP-pulsed plants to efficiently scavenge ROS, O2-, H2O2 and methylglyoxal, and mitigate oxidative injuries. The ROS production was also lowered due to suppressed NADPH oxidase activity. This ensured subsequent revitalization of Hill activity and the level of photosynthetic pigments. Due to reduced fluoride partitioning and improved nutritional sink, the grain and panicle development in FeNP-primed, stressed seedlings were more stimulated than even control sets. Overall, our findings supported by statistical modelling established the potential of iron-nanotechnology in promoting safe rice cultivation even in fluoride-polluted environments.

Fluoride toxicity variably affects overall physiology and grain development in three contrasting rice genotypes, representing a potential biohazard.

Ingestion of fluoride through consumption of contaminated food grains has been regarded to be hazardous for consumer health. The current study indicated the possible occurrence of such biohazard due to fluoride bioaccumulation in rice grains and straw (cattle feed). The effects of fluoride toxicity at three stages of grain development in three rice genotypes, viz., IR-64, Gobindobhog (aromatic), and Khitish, were also studied. Irrigation with fluoride-infested water inhibited grain formation in IR-64 and reduced grain yield in Gobindobhog. Fluoride toxicity promoted seed sterility in IR-64 by triggering reactive oxygen species (ROS) production and cellular necrosis, suppressing genes like GIF1, DEP1, and SPL14 (positively controlling seed formation) and inducing GW2 (negatively mediating grain development). Gobindobhog showed intermediate fluoride sensitivity and accumulated high levels of proline, anthocyanins, flavonoids, and phenolics due to the induction of genes like P5CS, ANS, and PAL in developing grains. The agronomic attributes in Khitish were unaffected by fluoride stress due to regulated fluoride uptake and high expression of GIF1, DEP1, and SPL14 along with an increased synthesis of anthocyanins, flavonoids, and phenolics. Khitish also accumulated low ROS as a result of which lowest lipoxygenase expression (among selected cultivars) was observed in developing grains. Fluoride entry was accelerated in the straw of Khitish, possibly due to the absence of regulated uptake mechanism in dead seedlings. Furthermore, the ecological concerns regarding fluoride bioaccumulation and reduced grain yield at the varietal level were also established, based on statistical modelling.