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1.
J Sep Sci ; 46(22): e2300543, 2023 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-37735989

RESUMO

Vestibular schwannoma is the most common benign neoplasm of the cerebellopontine angle. Its first symptoms include hearing loss, tinnitus, and vestibular symptoms, followed by cerebellar and brainstem symptoms, along with palsy of the adjacent cranial nerves. However, the clinical picture has unpredictable dynamics and currently, there are no reliable predictors of tumor behavior. Hence, it is desirable to have a fast routine method for analysis of vestibular schwannoma tissues at the molecular level. The major objective of this study was to verify whether a technique using in-sample specific protein digestion with trypsin would have the potential to provide a proteomic characterization of these pathological tissues. The achieved results showed that the use of this approach with subsequent liquid chromatography-tandem mass spectrometry (LC-MS/MS) analysis of released peptides allowed a fast identification of a considerable number of proteins in two differential parts of vestibular schwannoma tissue as well as in tissues of control healthy samples. Furthermore, mathematical analysis of MS data was able to discriminate between pathological vestibular schwannoma tissues and healthy tissues. Thus, in-sample protein digestion combined with LC-MS/MS separation and identification of released specific peptides followed by mathematical analysis appears to have the potential for routine characterization of vestibular schwannomas at the molecular level. Data are available via ProteomeXchange with identifier PXD045261.


Assuntos
Neuroma Acústico , Fragmentos de Peptídeos , Humanos , Fragmentos de Peptídeos/análise , Fragmentos de Peptídeos/química , Fragmentos de Peptídeos/metabolismo , Cromatografia Líquida/métodos , Espectrometria de Massas em Tandem/métodos , Proteômica/métodos , Proteólise , Peptídeos/metabolismo , Tripsina/química
2.
J Sep Sci ; 46(18): e2300417, 2023 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-37528727

RESUMO

Diquats, derivatives of the widely used herbicide diquat, represent a new class of functional organic molecules. A combination of their special electrochemical properties and axial chirality could potentially result in their important applications in supramolecular chemistry, chiral catalysis, and chiral analysis. However, prior to their practical applications, the diquats have to be prepared in enantiomerically pure forms and the enantiomeric purity of their P- and M-isomers has to be checked. Hence, a chiral capillary electrophoresis (CE) method has been developed and applied for separation of P- and M-enantiomers of 11 new diquats. Fast and better than baseline CE separations of enantiomers of all 11 diquats within a short time 5-7 min were achieved using acidic buffer, 22 mM NaOH, 35 mM H3 PO4 , pH 2.5, as a background electrolyte, and 6 mM randomly sulfated α-, ß-, and γ-cyclodextrins as chiral selectors. The most successful selector was sulfated γ-cyclodextrin, which baseline separated the enantiomers of all 11 diquats, followed by sulfated ß-cyclodextrin and sulfated α-cyclodextrin, which baseline separated enantiomers of 10 and nine diquats, respectively. Using this method, a high enantiopurity degree of the isolated P- and M-enantiomers of three diquats with a defined absolute configuration was confirmed and their migration order was identified.

3.
J Sep Sci ; 45(24): 4388-4396, 2022 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-36222229

RESUMO

For the understanding of pathological states of bone tissues in oral surgery, it would be desirable to have the possibility to simulate these processes on bone cell models in vitro. These cultures, similarly to bone tissues, contain numerous proteins entrapped in the insoluble matrix. The major goal of this study was to verify whether a method based on direct in-matrix protein digestion could be suitable for the discrimination between different induced pathological states of bone cell models cultivated in vitro. Using in-sample specific protein digestion with trypsin followed by liquid chromatography-tandem mass spectrometry analysis of released peptides, 446 proteins (in average per sample) were identified in a bone cell in vitro model with induced cancer, 440 proteins were found in a model with induced inflammation, 451 proteins were detected in control in vitro culture, and 491 proteins were distinguished in samples of vestibular laminas of maxillary bone tissues originating from six different patients. Subsequent partial least squares - discrimination analysis of obtained liquid chromatography-tandem mass spectrometry data was able to discriminate among in vitro cultures with induced cancer, with induced inflammation, and control cultivation. Thus, the direct in-sample protein digestion by trypsin followed by liquid chromatography-tandem mass spectrometry analysis of released specific peptide fragments from the insoluble matrix and mathematical analysis of the mass spectrometry data seems to be a promising tool for the routine proteomic characterization of in vitro human bone models with induced different pathological states.


Assuntos
Procedimentos Cirúrgicos Bucais , Espectrometria de Massas em Tandem , Humanos , Espectrometria de Massas em Tandem/métodos , Tripsina/química , Proteômica/métodos , Proteólise , Cromatografia Líquida/métodos , Peptídeos/análise , Proteínas/química , Inflamação
4.
J Sep Sci ; 45(17): 3328-3338, 2022 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-35462458

RESUMO

Chiral CE methods were developed for the elucidation of l- or d-configuration of tyrosine residue in antimicrobial dipeptide ß-alanyl-tyrosine (ß-Ala-Tyr) isolated from the hemolymph of larvae of fleshfly Neobellieria bullata and for the evaluation of enantiopurity of its synthetic isomers (ß-Ala-d-Tyr and ß-Ala-l-Tyr), and enantiomers of their amidated and acetylated derivatives, ß-Ala-d,l-Tyr-NH2 and N-Ac-ß-Ala-d,l-Tyr, respectively. Baseline separations were achieved for all three pairs of enantiomers: (i) for ß-Ala-d,l-Tyr in acidic background electrolyte composed of 32/50 mM tris(hydroxymethyl)aminomethane/H3 PO4 , pH 2.5, and 20 mg/mL 2-hydroxypropyl-ß-cyclodextrin as chiral selector; (ii) for ß-Ala-d,l-Tyr-NH2 enantiomers in acidic background electrolyte consisting of 48/50 mM tris(hydroxymethyl)aminomethane/H3 PO4 , pH 3.5, and 30 mg/mL 2-hydroxypropyl-ß-cyclodextrin; and (iii) for enantiomers of N-Ac-ß-Ala-d,l-Tyr in alkaline background electrolyte composed of 50/49 mM Na2 B4 O7 /NaOH, pH 10.5, and 60 mg/mL 2-hydroxypropyl-ß-cyclodextrin. From CE analyses of mixed samples of isolated ß-Ala-Tyr and synthetic standards ß-Ala-l-Tyr and ß-Ala-d-Tyr, it turned out that isolated ß-Ala-Tyr was pure l-enantiomer. In addition, the average apparent binding constants, Kb , and average actual ionic mobilities of the complexes of ß-Ala-d,l-Tyr and its above derivatives with 2-hydroxypropyl-ß-cyclodextrin were determined. These complexes were weak, with Kb values ranging from 11.2 to 79.1 L/mol. Their cationic mobilities were equal to (5.6-9.2) × 10-9 m2 /V/s, and anionic mobilities to (-1.3-1.6) × 10-9 m2 /V/s.


Assuntos
Ciclodextrinas , beta-Ciclodextrinas , 2-Hidroxipropil-beta-Ciclodextrina , Ciclodextrinas/química , Eletrólitos , Eletroforese Capilar/métodos , Concentração de Íons de Hidrogênio , Estereoisomerismo , Trometamina , Tirosina , beta-Ciclodextrinas/química
5.
Molecules ; 26(18)2021 Sep 16.
Artigo em Inglês | MEDLINE | ID: mdl-34577107

RESUMO

The problem of a growing resistance of bacteria and other microorganisms to conventional antibiotics gave rise to a search for new potent antimicrobial agents. Insect antimicrobial peptides (AMPs) seem to be promising novel potential anti-infective therapeutics. The dipeptide ß-alanyl-tyrosine (ß-Ala-Tyr) is one of the endogenous insect toxins exhibiting antibacterial activity against both Gram-negative and Gram-positive bacteria. Prior to testing its other antimicrobial activities, it has to be prepared in a pure form. In this study, we have developed a capillary zone electrophoresis (CZE) method for analysis of ß-Ala-Tyr isolated from the extract of the hemolymph of larvae of the fleshfly Neobellieria bullata by reversed-phase high-performance liquid chromatography (RP-HPLC). Based on our previously described correlation between CZE and free-flow zone electrophoresis (FFZE), analytical CZE separation of ß-Ala-Tyr and its admixtures have been converted into preparative purification of ß-Ala-Tyr by FFZE with preparative capacity of 45.5 mg per hour. The high purity degree of the ß-Ala-Tyr obtained by FFZE fractionation was confirmed by its subsequent CZE analysis.


Assuntos
Anti-Infecciosos/química , Anti-Infecciosos/isolamento & purificação , Dipeptídeos/química , Dipeptídeos/isolamento & purificação , Eletroforese/métodos , Hemolinfa/química , Sarcofagídeos/química , Animais , Cromatografia Líquida de Alta Pressão , Larva/química
6.
Electrophoresis ; 42(23): 2552-2562, 2021 12.
Artigo em Inglês | MEDLINE | ID: mdl-34453862

RESUMO

Proteomic characterization of alveolar bones in oral surgery represents an analytical challenge due to their insoluble character. The implementation of a straightforward technique could lead to the routine use of proteomics in this field. This work thus developed a simple technique for the characterization of bone tissue for human maxillary and mandibular bones. It is based on the direct in-bone tryptic digestion of proteins in both healthy and pathological human maxillary and mandibular bone samples. The released peptides were then identified by the LC-MS/MS. Using this approach, a total of 1120 proteins were identified in the maxillary bone and 1151 proteins in the mandibular bone. The subsequent partial least squares-discrimination analysis (PLS-DA) of protein data made it possible to reach 100% discrimination between the samples of healthy alveolar bones and those of the bone tissue surrounding the inflammatory focus. These results indicate that the in-bone protein digestion followed by the LC-MS/MS and subsequent statistical analysis can provide a deeper insight into the field of oral surgery at the molecular level. Furthermore, it could also have a diagnostic potential in the differentiation between the proteomic patterns of healthy and pathological alveolar bone tissue. Data are available via ProteomeXchange with the identifier PXD026775.


Assuntos
Mandíbula , Maxila , Procedimentos Cirúrgicos Bucais , Proteínas , Proteômica , Cromatografia Líquida , Humanos , Mandíbula/metabolismo , Maxila/metabolismo , Peptídeos , Proteínas/metabolismo , Proteólise , Espectrometria de Massas em Tandem , Tripsina/metabolismo
7.
Int J Mol Sci ; 21(23)2020 Dec 05.
Artigo em Inglês | MEDLINE | ID: mdl-33291486

RESUMO

Ameloblastin (Ambn) as an intrinsically disordered protein (IDP) stands for an important role in the formation of enamel-the hardest biomineralized tissue commonly formed in vertebrates. The human ameloblastin (AMBN) is expressed in two isoforms: full-length isoform I (AMBN ISO I) and isoform II (AMBN ISO II), which is about 15 amino acid residues shorter than AMBN ISO I. The significant feature of AMBN-its oligomerization ability-is enabled due to a specific sequence encoded by exon 5 present at the N-terminal part in both known isoforms. In this study, we characterized AMBN ISO I and AMBN ISO II by biochemical and biophysical methods to determine their common features and differences. We confirmed that both AMBN ISO I and AMBN ISO II form oligomers in in vitro conditions. Due to an important role of AMBN in biomineralization, we further addressed the calcium (Ca2+)-binding properties of AMBN ISO I and ISO II. The binding properties of AMBN to Ca2+ may explain the role of AMBN in biomineralization and more generally in Ca2+ homeostasis processes.


Assuntos
Proteínas de Ligação ao Cálcio/metabolismo , Cálcio/metabolismo , Proteínas do Esmalte Dentário/metabolismo , Proteínas de Ligação ao Cálcio/química , Proteínas do Esmalte Dentário/química , Humanos , Hidrodinâmica , Proteínas Intrinsicamente Desordenadas/metabolismo , Modelos Biológicos , Ligação Proteica , Isoformas de Proteínas , Multimerização Proteica , Análise Espectral , Temperatura
8.
J Sep Sci ; 43(20): 3949-3959, 2020 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-32779841

RESUMO

The commonly used histological assessment of pathological states of alveolar bone tissues in oral surgery needs laborious and time-consuming processing by an experienced histologist. Therefore, a simpler and faster methodology is required in this field. Following this demand, this paper reports a straightforward approach using the tryptic cleavage of proteins directly in bone without its demineralization, followed by the capillary electrophoresis-ultraviolet detection profiling of the yielded protein digest. Cleavage-derived peptides were separated by capillary electrophoresis in acidic background electrolytes, pH 2.01-2.54. The best resolution of peptide fragments with the highest peak capacity was achieved in the background electrolyte composed of 55 mM H3 PO4 , 14 mM tris(hydroxymethyl)aminomethan, pH 2.01. The differences in the obtained capillary electrophoresis-ultraviolet detection profiles with characteristic patterns for particular bone samples were subsequently discriminated by linear discriminant analysis over principal components. This approach was first verified on porcine bone tissues as model samples; jawbone and calf bone tissues could be discriminated with an accuracy of 100%. Subsequently, the method was capable of differentiating unequivocally between human healthy and inflammatory alveolar bone tissues obtained from oral surgery. This procedure seems to be promising as complement or even an alternative to the traditional histological discrimination between healthy and inflammatory bone tissues in oral surgery.


Assuntos
Osso e Ossos/química , Inflamação/diagnóstico , Inflamação/cirurgia , Procedimentos Cirúrgicos Bucais , Tripsina/metabolismo , Animais , Osso e Ossos/metabolismo , Eletroforese Capilar , Humanos , Inflamação/metabolismo , Suínos , Tripsina/química
9.
Electrophoresis ; 41(7-8): 523-535, 2020 04.
Artigo em Inglês | MEDLINE | ID: mdl-31763706

RESUMO

In this study, the apparent binding constants and limiting mobilities of the multiply charged complexes of the Δ- and Λ-enantiomers of Ru(II)- and Fe(II)-polypyridyl associates ([Ru(2,2'-bipyridine)3 ]2+ , [Ru(1,10-phenanthroline)3 ]2+ , and [Fe(1,10-phenanthroline)3 ]2+ ) with single-isomer 2,3-diacetylated-6-sulfated-cyclodextrins (CDs) (12Ac-6S-α-CD, 14Ac-7S-ß-CD, and 16Ac-8S-γ-CD) were determined by ACE using uncorrected and ionic strength corrected actual mobilities of the species involved. Two limiting models were tested for the ionic strength correction of the actual mobilities based on an empirical relation for the ionic strength correction of multivalent ionic species. In model 1, the nominal values of the charge numbers (zS,nom ) and analytical concentrations (cS,nom ) of the above CD selectors in the BGEs were applied for calculation of the BGE ionic strength, as usual. In model 2, the CD selectors were considered as singly charged species (zS  = -1) with |zS,nom |-times higher concentrations in the BGE than their analytical concentrations (cS  = |zS,nom | × cS,nom ) in the calculation of the BGE ionic strength. In all three cases-with uncorrected actual mobilities as well as with actual mobilities corrected according to the two limiting models-the measured effective mobilities of the above enantiomers fit well the theoretical curves of their mobility dependences on the CD selectors concentrations in the BGE, with high average coefficients of determination (R2  = 0.9890-0.9995). Nevertheless, the best physico-chemically meaningful values of the apparent binding constants and the limiting mobilities of the enantiomer-CDs complexes with low RSDs were obtained using the actual mobilities of the species involved corrected according to model 2.


Assuntos
Ciclodextrinas/química , Eletroforese Capilar/métodos , Modelos Moleculares , Concentração Osmolar , Estereoisomerismo , Sulfatos/química
10.
Chemistry ; 24(30): 7601-7604, 2018 May 28.
Artigo em Inglês | MEDLINE | ID: mdl-29575285

RESUMO

Diquats with extremely high racemization barriers with ΔG≠theor of 233 kJ mol-1 at 180 °C are described. Reported configurational robustness is due to a combination of two structural features: the rigid o-xylylene tether connecting the nitrogen atoms and the presence of two substituents in the bay region of the bipyridinium scaffold. The straightforward synthesis of diquats, plus facile resolution and derivatization make them attractive for chiral application studies. This is demonstrated by: 1) synthesis of the first non-racemic diquat dyes with pronounced chiroptical properties, and 2) capability of diquats to interact stereospecifically with chiral molecules. This suggests potential for diquat derivatives to be used as chiral selectors in separation methods.

11.
Chirality ; 30(3): 254-260, 2018 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-29293281

RESUMO

Synthesis and nontrivial optical resolution of a helicene-like dication, helquat 1, has been accomplished. Starting with gram scale of the racemic helquat 1 sample, Dutch Resolution using family of 3 tartrate anions was key to achieve successful separation of M and P helical enantiomers of 1. Hundreds of milligrams of each enantiomer of this configurationally stable C2 -symmetric helquat have been obtained. Racemization barrier of 1 has been determined. To our knowledge this is the first report on Dutch Resolution performed with a helicene-like compound. Moreover, there are no literature precedents for Dutch Resolution of chiral quaternary ammonium cations.

12.
Electrophoresis ; 38(15): 1913-1921, 2017 08.
Artigo em Inglês | MEDLINE | ID: mdl-28432685

RESUMO

CE using randomly highly sulfated α-, ß-, and γ-CDs (S-α-CD, S-ß-CD, S-γ-CD), sulfobutylether-ß-CD (SBE-ß-CD), single isomer (6-O-sulfo) α-, ß-, and γ-CDs, and their derivatives as stereoselectors was applied to chiral analysis of polypyridyl complexes of [Ru(bpy)3 ]2+ , [Ru(phen)3 ]2+ , and [Fe(phen)3 ]2+ (bpy = 2,2'-bipyridine; phen = 1,10 phenanthroline). The best separations of Δ- and Λ-enantiomers of the these complexes with high resolution (up to R1,2  = 7.0) and short analysis times (10-20 min) were achieved in the BGE composed of 22 mM NaOH/35 mM H3 PO4 , pH 2.4, containing 1.5-6.0 mM S-α-CD or S-ß-CD, or SBE-ß-CD as chiral selectors. The developed method was applied to the assessment of enantiomeric purity of several samples of [Ru(bpy)3 ]2+ catalyst. CE experiments were performed in a homemade analyzer equipped with bare or hydroxypropylcellulose-coated fused-silica capillaries (total/effective length 40/29 cm, id/od 50/375 µm) and an UV absorption detector operating at 206 nm. In addition to chiral analysis, apparent binding constants of the complexes of [Ru(bpy)3 ]2+ , [Ru(phen)3 ]2+ , and [Fe(phen)3 ]2+ enantiomers with five sulfated CDs (S-α-CD, S-ß-CD, S-γ-CD, SBE-ß-CD, and 16Me-8S-γ-CD) were determined from the dependence of their effective electrophoretic mobilities on the concentration of the CDs in the BGE by nonlinear regression analysis. Calculated apparent binding constants of these complexes were found to be in the (1.10-4.66) × 103  L/mol range. Moreover, it was shown that at selected concentrations of some S-CDs and suppressed or very low electroosmotic flow, the exceptional enantioseparations with infinite resolution could be achieved.


Assuntos
Ciclodextrinas/química , Eletroforese Capilar/métodos , Compostos Ferrosos/análise , Piridinas/análise , Rutênio/análise , Compostos Ferrosos/química , Dinâmica não Linear , Piridinas/química , Rutênio/química , Estereoisomerismo , Sulfatos/química
13.
Chem Commun (Camb) ; 51(9): 1583-6, 2015 Jan 31.
Artigo em Inglês | MEDLINE | ID: mdl-25555172

RESUMO

Helquat dyes are the first helicene-like cationic styryl dyes obtained as separate enantiomers. Their remarkable chiroptical properties are due to the unique combination of a cationic hemicyanine chromophore and a helicene-like motif. The magnitude of the ECD response and the pH switching along with their positioning in the visible region are unprecedented among helicenoids.

14.
Anal Biochem ; 467: 4-13, 2014 Dec 15.
Artigo em Inglês | MEDLINE | ID: mdl-25205653

RESUMO

Thirteen mono-N-acyl derivatives of 2,6-diaminopimelic acid (DAP)-new potential inhibitors of the dapE-encoded N-succinyl-l,l-diaminopimelic acid desuccinylase (DapE; EC 3.5.1.18)-were analyzed and characterized by infrared (IR) and nuclear magnetic resonance (NMR) spectroscopies and two capillary electromigration methods: capillary zone electrophoresis (CZE) and micellar electrokinetic chromatography (MEKC). Structural features of DAP derivatives were characterized by IR and NMR spectroscopies, whereas CZE and MEKC were applied to evaluate their purity and to investigate their electromigration properties. Effective electrophoretic mobilities of these compounds were determined by CZE in acidic and alkaline background electrolytes (BGEs) and by MEKC in acidic and alkaline BGEs containing a pseudostationary phase of anionic detergent sodium dodecyl sulfate (SDS) or cationic detergent cetyltrimethylammonium bromide (CTAB). The best separation of DAP derivatives, including diastereomers of some of them, was achieved by MEKC in an acidic BGE (500 mM acetic acid [pH 2.54] and 60mM SDS). All DAP derivatives were examined for their ability to inhibit catalytic activity of DapE from Haemophilus influenzae (HiDapE) and ArgE from Escherichia coli (EcArgE). None of these DAP derivatives worked as an effective inhibitor of HiDapE, but one derivative-N-fumaryl, Me-ester-DAP-was found to be a moderate inhibitor of EcArgE, thereby providing a promising lead structure for further studies on ArgE inhibitors.


Assuntos
Amidoidrolases/antagonistas & inibidores , Ácido Diaminopimélico/química , Eletroforese Capilar/métodos , Inibidores Enzimáticos/farmacologia , Espectroscopia de Ressonância Magnética/métodos , Espectrofotometria Infravermelho/métodos , Inibidores Enzimáticos/química , Escherichia coli/enzimologia , Haemophilus influenzae/enzimologia
15.
Bioorg Med Chem ; 21(5): 1199-208, 2013 Mar 01.
Artigo em Inglês | MEDLINE | ID: mdl-23375089

RESUMO

New large-scale synthetic approach to antiretroviral agent 9-[2-(R)-(phosphonomethoxy)propyl]-2,6-diaminopurine, (R)-PMPDAP, was developed. Reaction of (R)-propanediol carbonate with 2,6-diaminopurine afforded exclusively (R)-9-(2-hydroxypropyl)-2,6-diaminopurine which was subsequently used for introduction of a phosphonomethyl residue using TsOCH(2)P(O)(OiPr)(2) or BrCH(2)P(O)(OiPr)(2) followed by deprotection of ester groups. All minor ingredients and by-products formed during the process were identified and further studied. The final product was obtained in high yield and its high enantiomeric purity (>99%) was confirmed by chiral capillary electrophoretic analysis using ß-cyclodextrin as a chiral selector. Antiretroviral activity data of (R)-PMPDAP and its diverse prodrugs against HIV and FIV were investigated. Akin to (R)-PMPDAP, both prodrugs inhibit FIV replication in a selective manner. Compared to the parent molecule, the amidate prodrug was 10-fold less active against FIV in cell culture, whereas the alkoxyalkyl ester prodrug was 200-fold more potent in inhibiting FIV replication in vitro.


Assuntos
Adenina/análogos & derivados , Antivirais/química , Compostos Organofosforados/química , Pró-Fármacos/química , Adenina/química , Adenina/farmacologia , Antivirais/farmacologia , HIV-1/efeitos dos fármacos , Vírus da Imunodeficiência Felina/efeitos dos fármacos , Compostos Organofosforados/farmacologia , Pró-Fármacos/farmacologia , Estereoisomerismo
17.
Food Chem ; 134(3): 1607-15, 2012 Oct 01.
Artigo em Inglês | MEDLINE | ID: mdl-25005989

RESUMO

Capillary zone electrophoresis (CZE) has been applied to separation and characterisation of enzymatic (tryptic) hydrolysates of water-soluble proteins from Bacillus thuringiensis (Bt)-transgenic (Aristis-Bt) and two native non-transgenic (Aristis and Coventry) maize varieties. Water-soluble proteins were extracted from the flour of these maize species and digested by bovine pancreatic trypsin immobilised on agarose gel in 100 mM ammonium hydrocarbonate buffer, pH 7.9. The yielded tryptic digests of proteins were analysed by CZE in four acidic background electrolytes (BGEs) (100 mM H3PO4, 50 mM Tris, pH 2.25; 500 mM acetic acid, pH 2.54; 200 mM formic acid, 200 mM acetic acid, pH 2.05; and 200 mM iminodiacetic acid, pH 2.26) using a lab-made CZE apparatus equipped with bare fused silica capillary and UV-absorption detector operating at 206 nm. Among the tested BGEs, the best resolution of the tryptic peptides of extracted proteins of the above three maize species was obtained in isoelectric BGE, 200 mM iminodiacetic acid, pH 2.26. Selected resolved tryptic peptides of proteins were characterised by effective electrophoretic mobilities and corrected (migration times normalised) peak areas. Some significant relative qualitative and quantitative differences in CZE-UV profiling of tryptic protein digests were found, which can be potentially used to differentiate transgenic Aristis Bt and non-transgenic Aristis varieties or two native non-transgenic varieties, Aristis and Coventry.


Assuntos
Bacillus thuringiensis/química , Eletroforese Capilar/métodos , Proteínas/química , Zea mays/química , Animais , Bovinos
18.
J Sep Sci ; 32(21): 3801-8, 2009 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-19813231

RESUMO

A new method for extraction and CZE separation and characterization of water-soluble proteins (albumin fraction) from Bacillus thuringiensis-transgenic and non-transgenic maize varieties was developed. Protein content in the extracts from maize flours was estimated by UV-absorbance at 280 nm and Lowry protein assay. Protein extracts were analyzed by CZE in four acidic BGEs (100 mM H(3)PO(4), 50 mM Tris, pH 2.25; 500 mM acetic acid, pH 2.6; 200 mM formic acid, 200 mM acetic acid, pH 2.05; 200 mM iminodiacetic acid, pH 2.26) using a homemade CZE device equipped with bare fused silica capillary and UV-absorption detector at 206 nm. Among the tested BGEs, the best resolution of extracted proteins was achieved in isoelectric BGE, 200 mM iminodiacetic acid, pH 2.26. Well-resolved components of protein extracts were characterized by effective electrophoretic mobilities and corrected (migration times normalized) peak areas. Significant qualitative and quantitative differences in CZE-UV profiling were found. This approach can potentially be used to distinguish the B. thuringiensis variety from the wild maize in an easy and straightforward way.


Assuntos
Bacillus thuringiensis/genética , Proteínas de Plantas/isolamento & purificação , Plantas Geneticamente Modificadas/química , Zea mays/química , Eletroforese Capilar , Proteínas de Plantas/genética , Plantas Geneticamente Modificadas/genética , Proteínas Recombinantes/genética , Proteínas Recombinantes/isolamento & purificação , Solubilidade , Água , Zea mays/genética
19.
Electrophoresis ; 30(12): 2245-54, 2009 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-19544492

RESUMO

A new CZE method has been developed for chiral analysis of an important anti-acquired immunodeficiency syndrome drug, 9-(R)-[2-(phosphonomethoxy)propyl]adenine ((R)-PMPA, tenofovir), and six related antiviral acyclic nucleoside phosphonates using beta-CD as a chiral selector. The influence of the composition, concentration and pH of the BGE and the type and concentration of chiral selector on enantiomer resolution was investigated. Complete separations of (R,S)-enantiomers of PMPA with very good resolution (R(s)=1.50-3.64) were achieved within a short time (4-15 min) in 20-50 mM sodium borate or sodium tetraborate BGEs, pH 10.0, at 20 mg/mL concentration of beta-CD. (R,S)-enantiomers of five similar PMPA analogs containing purine bases (adenine, diaminopurine or guanine) and hydroxyl or fluor substituents at C3 carbon atom of propyl chain were baseline separated within 10-17 min in 35 mM sodium tetraborate BGE, pH 10.0, at 20 mg/mL beta-CD concentration. Another important antiviral used by acquired immunodeficiency syndrome patients, derived from pyrimidine base cytosine, 1-(S)-[3-hydroxy-2-(phosphonomethoxy)propyl]cytosine (cidofovir), and the (R)-enantiomer of this drug were successfully separated in 50 mM sodium tetraborate BGE, pH 10.5, at 20 mg/mL beta-CD concentration within 45 min. Using the UV-absorption detection at 206 nm, the concentration detection limits of the analyzed acyclic nucleoside phosphonates were determined in the submicromolar to micromolar range (0.15-2.51 microg/mL level).


Assuntos
Adenina/análogos & derivados , Fármacos Anti-HIV/química , Citosina/análogos & derivados , Eletroforese Capilar/métodos , Organofosfonatos/química , beta-Ciclodextrinas/química , Adenina/química , Cidofovir , Citosina/química , Eletrólitos , Concentração de Íons de Hidrogênio , Modelos Lineares , Purinas/química , Pirimidinas/química , Reprodutibilidade dos Testes , Sensibilidade e Especificidade , Estereoisomerismo , Tenofovir
20.
J Pept Sci ; 14(6): 670-82, 2008 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-18044819

RESUMO

We chose the larvae of fleshfly Sarcophaga bullata to map the peptide and protein immune response. The hemolymph of the third-instar larvae of S. bullata was used for isolation. The larvae were injected with bacterial suspension to induce an antimicrobial response. The hemolymph was separated into crude fractions, which were subdivided by RP-HPLC, gel electrophoresis, and free-flow electrophoresis. In several fractions, we determined significant antimicrobial activities against the pathogenic bacteria Escherichia coli, Staphylococcus aureus, or Pseudomonas aeruginosa. Among antimicrobially active compounds we identified dipeptide beta-alanyl-L-tyrosine, protein transferrin, and two variants of peptide sapecin. We also partially characterized two novel antimicrobially active polypeptides; odorant-binding protein 99b, and a peptide which remains unidentified.


Assuntos
Dípteros/imunologia , Proteínas de Insetos/imunologia , Larva/imunologia , Sequência de Aminoácidos , Animais , Cromatografia Líquida de Alta Pressão , Dípteros/crescimento & desenvolvimento , Eletroforese em Gel de Poliacrilamida , Proteínas de Insetos/química , Dados de Sequência Molecular , Peso Molecular , Mapeamento de Peptídeos , Espectrometria de Massas por Ionização por Electrospray
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