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1.
Case Rep Hematol ; 2019: 6015803, 2019.
Artigo em Inglês | MEDLINE | ID: mdl-31885954

RESUMO

Peripheral blood stem cell transplantation (PBSCT) has increasingly been used for hematologic cancer therapy, resulting in improved survival rates. However, risks include graft-versus-host disease (GVHD) and secondary solid tumors. Here, we describe a case of tongue squamous cell carcinoma (SCC) complicated by bronchiolitis obliterans (BO) following PBSCT. A 42-year-old man with a history of acute lymphocytic leukemia treated with PBSCT presented with multiple white lesions and erosions on the tongue and buccal mucosa that are compatible with oral chronic GVHD (NIH criteria: score 2). The lesions were presented for 8 years. The patient had a history of BO manifested as GVHD. During follow-up, an exophytic mass was rapidly developed on the left dorsum of the tongue. Biopsy of this lesion confirmed SCC (cT2N0M0). Pulmonary function testing for general anesthesia was almost normal. Hemiglossectomy, supraomohyoid neck dissection, and tongue reconstruction were performed. Thirteen months after surgery, the patient showed neither recurrence of tumor nor progression of oral GVHD. However, the patient died of respiratory failure due to repeated pneumothoraxes and deterioration of BO.

2.
J Plant Physiol ; 201: 9-16, 2016 Aug 20.
Artigo em Inglês | MEDLINE | ID: mdl-27372278

RESUMO

It has been reported that Poly-ß-hydroxybutyrate (PHB) is generated from acetate in the rice root. However, no information is available about the biosynthetic pathway of PHB from acetate in plant cells. In the bacterium Ralstonia eutropha H16 (R. eutropha), PHB is synthesized from acetyl CoA by the consecutive reaction of three enzymes: ß-ketothiolase (EC: 2.3.1.9), acetoacetyl CoA reductase (EC: 1.1.1.36) and PHB synthase (EC: 2.3.1.-). Thus, in this study, we examined whether the above three enzymatic activities were also detected in rice seedlings. The results clearly showed that the activities of the above three enzymes were all detected in rice. In particular, the PHB synthase activity was detected specifically in the sonicated particulate fractions (2000g 10min precipitate (ppt) and the 8000g 30min ppt) of rice roots and leaves. In addition to these enzyme activities, several new experimental results were obtained on PHB synthesis in higher plants: (a) (14)C-PHB generated from 2-(14)C-acetate was mainly localized in the 2000g 10min ppt and the 8000g 30min ppt of rice root. (b) Addition of acetate (0.1-10mM) to culture medium of rice seedlings did not increase the content of PHB in the rice root or leaf. (c) In addition to C3 plants, PHB was generated from acetate in a C4 plant (corn) and in a CAM plant (Bryophyllum pinnatum). d) Washing with ethylenediaminetetraacetic acid (EDTA) strongly suggested that the PHB synthesized from acetate was of plant origin and was not bacterial contamination.


Assuntos
Acetatos/metabolismo , Aciltransferases/metabolismo , Oxirredutases do Álcool/metabolismo , Hidroxibutiratos/metabolismo , Oryza/enzimologia , Oryza/metabolismo , Poliésteres/metabolismo , Absorção Fisiológica , Radioisótopos de Carbono , Contagem de Colônia Microbiana , Redes e Vias Metabólicas , Oryza/microbiologia , Rizosfera , Plântula/metabolismo , Frações Subcelulares/metabolismo , Zea mays/metabolismo
3.
Case Rep Dent ; 2015: 518917, 2015.
Artigo em Inglês | MEDLINE | ID: mdl-25664186

RESUMO

An ectopic tonsil is defined as tonsillar tissue that develops in areas outside of the four major tonsil groups: the palatine, lingual, pharyngeal, and tubal tonsils. The occurrence of tonsillar tissue in the oral cavity in ectopic locations, its prevalence, and its developmental mechanisms that belong to its formation remain unclear. In this report, we describe a rare case of bilateral symmetric ectopic oral tonsillar tissue located at the ventral surface of the tongue along with two solitary cases arising from the floor of the mouth. The role of immune system and its aberrant response leading to ectopic deposits desires further studies. As an ectopic tonsil may simulate a benign soft tissue tumor, this case series highlights the importance of this entity in our clinical differential diagnosis of oral soft tissue masses.

4.
Artigo em Inglês | MEDLINE | ID: mdl-24927637

RESUMO

Incidences of lymphoproliferative disorders (LPDs) in patients with compromised immune systems associated with immunosuppressants such as methotrexate (MTX) administered for the treatment of rheumatoid arthritis (RA) are reportedly increasing. Although extranodal lesions develop in half of the patients with MTX-associated LPDs, only a few studies have reported on intraoral lesions. We evaluated 2 elderly women with MTX-associated LPDs who had received MTX for the treatment of RA and presented with atypical ulceration of the tongue. Biopsy specimens demonstrated polymorphous B-cell LPD, probably associated with MTX. Epstein-Barr virus (EBV) was identified by immunohistochemistry for latent membrane protein 1 and by EBV-encoded RNA in situ hybridization. After MTX withdrawal, in both cases, ulcers showed complete regression at 8 weeks, and no subsequent treatment was required. Close monitoring of LPDs is mandatory, because recurrence within 10 months has been reported in half of the patients in whom LPDs had initially regressed.


Assuntos
Antirreumáticos/efeitos adversos , Artrite Reumatoide/tratamento farmacológico , Transtornos Linfoproliferativos/induzido quimicamente , Metotrexato/efeitos adversos , Doenças da Língua/induzido quimicamente , Idoso , Diagnóstico Diferencial , Feminino , Humanos , Transtornos Linfoproliferativos/diagnóstico , Doenças da Língua/diagnóstico
5.
Antonie Van Leeuwenhoek ; 105(1): 89-98, 2014 Jan.
Artigo em Inglês | MEDLINE | ID: mdl-24146107

RESUMO

Ralstonia pickettii T1 secretes a poly(3-hydroxybutyrate) (PHB) depolymerase (PhaZ) and a 3-hydroxybutyrate (3HB)-oligomer hydrolase, and extracellularly degrades PHB to produce 3HB. However, it is not clear how the expression of phaZ is regulated. In this study, the mechanism by which phaZ expression is controlled in R. pickettii T1 was examined using a mutant made by the random insertion of a transposon, Tn5. The mutant produced a larger amount of PhaZ than the wild type in nutrient broth or a minimal salt (SM) medium supplemented with succinate. However, there was essentially no difference in the activity or amount of PhaZ in the culture supernatant between the wild type and mutant when the two were grown on 3HB. The gene disrupted by the insertion of Tn5 (epdR) was cloned and its nucleotide sequence was determined. In a BLAST search, epdR showed a high degree of similarity to genes for TetR transcriptional regulators of several bacteria. The introduction of epdR into the wild type and mutant grown on the three media described above decreased the amount of PhaZ. These results indicated EpdR to be involved in the repression of phaZ in R. pickettii T1. A quantitative RT-PCR analysis indicated that mRNA levels corresponded with the activity detected and the amounts of PhaZ in the wild type and mutant. Furthermore, the amount of epdR transcript was inversely proportional to the amount of phaZ transcript. In addition, the existence of a positive element acting on phaZ expression was suggested, because in the mutant lacking EpdR, the amount of phaZ transcript varied in cells grown in SM-3HB, SM-succinate or nutrient broth. Based on the above results, a model for the regulation of PhaZ expression in R. pickettii T1 is proposed.


Assuntos
Proteínas de Bactérias/genética , Hidrolases de Éster Carboxílico/genética , Regulação para Baixo , Regulação Enzimológica da Expressão Gênica , Ralstonia pickettii/enzimologia , Proteínas Repressoras/metabolismo , Sequência de Aminoácidos , Proteínas de Bactérias/química , Proteínas de Bactérias/metabolismo , Hidrolases de Éster Carboxílico/metabolismo , Regulação Bacteriana da Expressão Gênica , Dados de Sequência Molecular , Ralstonia pickettii/química , Ralstonia pickettii/genética , Proteínas Repressoras/genética , Alinhamento de Sequência , Transcrição Gênica
6.
Antonie Van Leeuwenhoek ; 95(3): 249-62, 2009 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-19219638

RESUMO

We previously reported that the activities of two 3-hydroxybutyrate dehydrogenases (BDH1 and BDH2) were greatly influenced by culture conditions when Ralstonia pickettii T1, a strain growing on extracellular poly-3-hydroxybutyrate (PHB), was grown on different carbon sources such as 3HB and succinate. In this study, knockout mutants of bdh1 or bdh2 were constructed and characterized under different culture conditions. In addition, a novel BDH (BDH3) was found in bdh2 mutants, and bdh3 was cloned. Apparent kinetic parameters for the substrates of BDH3 indicated that the enzyme is suitable for the oxidation reaction of 3-hydroxybutyrate (3HB) to acetoacetate. In Western blotting, it was clear that BDH3 is produced only in cells grown on 3HB or PHB as a carbon source, while BDH1 and BDH2 are produced in cells grown on various carbon sources such as sugars, amino acids, organic acids, 3HB, and PHB. Both the bdh1 and bdh2 mutants lagged behind the wild type in growth rates when the cells were cultured with 3HB, citrate, succinate, or nutrient broth. A test of sensitivity to diamide as an oxidative stress revealed that the lack of BDH1 or BDH2 caused a decline in the capacity to neutralize the stress. These results suggested that BDH1 and BDH2 are needed to regulate the cytoplasmic redox state as well as to utilize 3HB, while BDH3 is specialized to utilize 3HB. The expression of bdh3 may be coordinately regulated with a gene encoding putative 3HB permease.


Assuntos
Proteínas de Bactérias/metabolismo , Hidroxibutirato Desidrogenase/metabolismo , Ralstonia pickettii/enzimologia , Ácido 3-Hidroxibutírico/metabolismo , Acetoacetatos/metabolismo , Sequência de Aminoácidos , Proteínas de Bactérias/genética , Western Blotting , Ácido Cítrico , Clonagem Molecular , Meios de Cultura , DNA Bacteriano/química , DNA Bacteriano/genética , Perfilação da Expressão Gênica , Técnicas de Inativação de Genes , Ordem dos Genes , Hidroxibutirato Desidrogenase/genética , Hidroxibutiratos/metabolismo , Cinética , Dados de Sequência Molecular , Estresse Oxidativo , Filogenia , Poliésteres/metabolismo , Ralstonia pickettii/genética , Ralstonia pickettii/crescimento & desenvolvimento , Alinhamento de Sequência , Análise de Sequência de DNA , Ácido Succínico/metabolismo
7.
Antonie Van Leeuwenhoek ; 94(2): 223-32, 2008 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-18340545

RESUMO

The extracellular poly(3-hydroxybutyrate) depolymerase from Ralstonia pickettii T1 has been purified, its function and character investigated in detail, and its gene cloned and sequenced. However, the mechanism by which this enzyme is secreted has not been elucidated. A mutant unable to degrade poly(3-hydroxybutyrate), N17, was obtained with the random insertion of a mini-transposon, Tn5. Western analysis using antiserum against the poly(3-hydroxybutyrate) depolymerase of Ralstonia pickettii T1, revealed that N17 accumulated the poly(3-hydroxybutyrate) depolymerase in the periplasm and cytoplasm, and did not secrete the enzyme into the external medium. It was also found that 3-hydroxybutyrate-oligomer hydrolase was secreted but inactive. The disrupted gene in N17, depO, was analyzed by Southern hybridization and its nucleotide sequence was determined. One complete open reading frame was found in the cloned 2.3-kbp DNA fragment. From a BLAST search, this gene product was found to be homologous to PulO of Ralstonia eutropha JMP134 (60% identity) and XcpA of Pseudomonas aeruginosa (60% identity). These proteins are prepilin peptidase/N-metyltransferases, a component of the Type II secretion pathway. DepO also had the four cysteines highly conserved in most prepilin peptidases at the same positions. The transcript of depO was examined by Northern hybridization using depO as a probe. In the total RNA of Ralstonia pickettii T1 in the early stationary phase, a band at 2.6-kb was detected, suggesting depO to be a functional gene. In this study, it was found that poly(3-hydroxybutyrate) depolymerase was secreted by the Type II pathway.


Assuntos
Proteínas de Bactérias/metabolismo , Hidrolases de Éster Carboxílico/metabolismo , Ralstonia pickettii/enzimologia , Sequência de Aminoácidos , Proteínas de Bactérias/química , Proteínas de Bactérias/genética , Hidrolases de Éster Carboxílico/química , Hidrolases de Éster Carboxílico/genética , Clonagem Molecular , Citoplasma/química , Citoplasma/enzimologia , Citoplasma/genética , Elementos de DNA Transponíveis , Teste de Complementação Genética , Dados de Sequência Molecular , Mutagênese Insercional , Fenótipo , Transporte Proteico , RNA Bacteriano/genética , RNA Bacteriano/metabolismo , Ralstonia pickettii/química , Ralstonia pickettii/genética , Alinhamento de Sequência , Análise de Sequência de DNA
8.
Appl Environ Microbiol ; 74(4): 1058-63, 2008 Feb.
Artigo em Inglês | MEDLINE | ID: mdl-18156336

RESUMO

The recently finished genome sequence of Ralstonia eutropha H16 harbors nine genes that are thought to encode functions for intracellular depolymerization (mobilization) of storage poly(3-hydroxybutyrate) (PHB). Based on amino acid similarities, the gene products belong to four classes (PhaZa1 to PhaZa5, PhaZb, PhaZc, and PhaZd1/PhaZd2). However, convincing direct evidence for the in vivo roles of the gene products is poor. In this study, we selected four candidate genes (phaZa1, phaZb, phaZc, and phaZd1) representing the four classes and investigated the physiological function of the gene products (i) with recombinant Escherichia coli strains and (ii) with R. eutropha null mutants. Evidence for weak but significant PHB depolymerase activity was obtained only for PhaZa1. The physiological roles of the other potential PHB depolymerases remain uncertain.


Assuntos
Ácido 3-Hidroxibutírico/metabolismo , Hidrolases de Éster Carboxílico/genética , Hidrolases de Éster Carboxílico/metabolismo , Cupriavidus necator/enzimologia , Western Blotting , Cromatografia Líquida de Alta Pressão , Cupriavidus necator/metabolismo , Escherichia coli , Glucose/metabolismo , Concentração de Íons de Hidrogênio , Microscopia de Fluorescência
9.
J Biosci Bioeng ; 104(3): 224-6, 2007 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-17964488

RESUMO

An intracellular 3-hydroxybutyrate-oligomer hydrolase was purified from a poly(3-hydroxybutyrate)-degrading bacterium, Paucimonas lemoignei. It hydrolyzed the 3-hydroxybutyrate dimer with the highest specific activity of any of the enzymes reported so far. The gene was cloned and sequenced. The deduced amino acid sequence showed that the enzyme is a homolog of the PhaZc of Ralstonia eutropha H16.


Assuntos
Ácido 3-Hidroxibutírico/química , Burkholderia/enzimologia , Clonagem Molecular/métodos , Escherichia coli/enzimologia , Hidrolases/química , Transfecção/métodos , Burkholderia/genética , Dimerização , Ativação Enzimática , Estabilidade Enzimática , Escherichia coli/genética , Hidrolases/genética , Proteínas Recombinantes/química , Proteínas Recombinantes/metabolismo , Especificidade por Substrato
10.
J Bacteriol ; 189(22): 8250-6, 2007 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-17720797

RESUMO

Poly(3-hydroxybutyrate) (PHB) granules isolated in native form (nPHB granules) from Ralstonia eutropha catalyzed formation of PHB from (14)C-labeled acetyl coenzyme A (CoA) in the presence of NADPH and concomitantly released CoA, revealing that PHB biosynthetic proteins (acetoacetyl-CoA thiolase, acetoacetyl-CoA reductase, and PHB synthase) are present and active in isolated nPHB granules in vitro. nPHB granules also catalyzed thiolytic cleavage of PHB in the presence of added CoA, resulting in synthesis of 3-hydroxybutyryl-CoA (3HB-CoA) from PHB. Synthesis of 3HB-CoA was also shown by incubation of artificial (protein-free) PHB with CoA and PhaZa1, confirming that PhaZa1 is a PHB depolymerase catalyzing the thiolysis reaction. Acetyl-CoA was the major product detectable after incubation of nPHB granules in the presence of NAD(+), indicating that downstream mobilizing enzyme activities were also present and active in isolated nPHB granules. We propose that intracellular concentrations of key metabolites (CoA, acetyl-CoA, 3HB-CoA, NAD(+)/NADH) determine whether a cell accumulates or degrades PHB. Since the degradation product of PHB is 3HB-CoA, the cells do not waste energy by synthesis and degradation of PHB. Thus, our results explain the frequent finding of simultaneous synthesis and breakdown of PHB.


Assuntos
Acetilcoenzima A/metabolismo , Cupriavidus necator/citologia , Cupriavidus necator/metabolismo , Hidroxibutiratos/metabolismo , Organelas/metabolismo , Poliésteres/metabolismo , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Catálise , Escherichia coli , Regulação Bacteriana da Expressão Gênica
11.
J Biosci Bioeng ; 101(6): 501-7, 2006 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-16935252

RESUMO

Two D-(-)-3-hydroxybutyrate (3HB) dehydrogenases, BDH1 and BDH2, were isolated and purified from a poly(3-hydroxybutyrate) (PHB)-degradable bacterium, Ralstonia pickettii T1. BDH1 activity increased in R. pickettii T1 cells grown on several organic acids as a carbon source but not on 3HB, whereas BDH2 activity markedly increased in the same cells grown on 3HB or PHB. To examine their biochemical properties, bdh1 and bdh2 were cloned and overexpressed in Escherichia coli, and their purified products were characterized. The kinetic parameters indicate that BDH1 is more suitable for converting acetoacetate to 3HB than BDH2, whereas BDH2 is more efficient for the reverse reaction than BDH1. Thus, R. pickettii T1 contains two BDHs with different biochemical properties and physiological roles: BDH1 for cell growth on organic acids other than 3HB and BDH2 for cell growth on 3HB or PHB.


Assuntos
Hidroxibutirato Desidrogenase/análise , Hidroxibutirato Desidrogenase/química , Hidroxibutirato Desidrogenase/isolamento & purificação , Hidroxibutiratos/metabolismo , Poliésteres/metabolismo , Ralstonia pickettii/enzimologia , Biodegradação Ambiental , Ativação Enzimática , Cinética , Especificidade por Substrato
12.
J Biochem ; 139(3): 615-21, 2006 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-16567428

RESUMO

Poly(3-hydroxybutyrate) (PHB) is synthesized from 3-hydroxybutyryl-CoA by polyhydroxyalkanoate synthase and hydrolyzed by PHB depolymerase. In this study, we focused on the reverse reaction of polyhydroxyalkanoate synthase, and propose the possibility that PHB can be degraded through a novel process, that is thiolysis of PHB with CoASH. Polyhydroxyalkanoate synthase of Ralstonia eutropha was incubated with 14C-labeled PHB and CoASH. The reaction mixture was fractionated by HPLC and then analyzed with a scintillation counter. The analysis revealed 3-hydroxybutyryl-CoA to be a product of the reaction. When NADP+ and acetoacetyl-CoA reductase were added to the reaction mixture, an increase in absorbance at 340 nm was observed. Native PHB inclusion bodies from R. eutropha also showed thiolytic activity. This is the first indication that polyhydroxyalkanoate synthase catalyzes both the synthesis and degradation of PHB, and that native PHB inclusion bodies has thiolytic activity.


Assuntos
Aciltransferases/fisiologia , Cupriavidus necator/enzimologia , Hidroxibutiratos/metabolismo , Poliésteres/metabolismo , Coenzima A/metabolismo , Escherichia coli/metabolismo
13.
J Mol Biol ; 356(4): 993-1004, 2006 Mar 03.
Artigo em Inglês | MEDLINE | ID: mdl-16405909

RESUMO

Polyhydroxybutyrate is a microbial polyester that can be produced from renewable resources, and is degraded by the enzyme polyhydroxybutyrate depolymerase. The crystal structures of polyhydroxybutyrate depolymerase from Penicillium funiculosum and its S39 A mutant complexed with the methyl ester of a trimer substrate of (R)-3-hydroxybutyrate have been determined at resolutions of 1.71 A and 1.66 A, respectively. The enzyme is comprised of a single domain, which represents a circularly permuted variant of the alpha/beta hydrolase fold. The catalytic residues Ser39, Asp121, and His155 are located at topologically conserved positions. The main chain amide groups of Ser40 and Cys250 form an oxyanion hole. A crevice is formed on the surface of the enzyme, to which a single polymer chain can be bound by predominantly hydrophobic interactions with several hydrophobic residues. The structure of the S39A mutant-trimeric substrate complex reveals that Trp307 is responsible for the recognition of the ester group adjacent to the scissile group. It is also revealed that the substrate-binding site includes at least three, and possibly four, subsites for binding monomer units of polyester substrates. Thirteen hydrophobic residues, which are exposed to solvent, are aligned around the mouth of the crevice, forming a putative adsorption site for the polymer surface. These residues may contribute to the sufficient binding affinity of the enzyme for PHB granules without a distinct substrate-binding domain.


Assuntos
Proteínas de Bactérias/química , Hidrolases de Éster Carboxílico/química , Hidroxibutiratos/metabolismo , Penicillium/enzimologia , Poliésteres/metabolismo , Estrutura Terciária de Proteína , Sequência de Aminoácidos , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Sítios de Ligação , Hidrolases de Éster Carboxílico/genética , Hidrolases de Éster Carboxílico/metabolismo , Cristalografia por Raios X , Hidroxibutiratos/química , Modelos Moleculares , Dados de Sequência Molecular , Estrutura Molecular , Poliésteres/química , Dobramento de Proteína , Estrutura Secundária de Proteína , Alinhamento de Sequência
14.
J Biosci Bioeng ; 102(6): 529-34, 2006 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-17270718

RESUMO

Two systems, one using an (R)-(-)-3-hydroxybutyrate dehydrogenase (BDH) null mutant of Ralstonia eutropha and the other using a recombinant Escherichia coli strain containing a synthetic poly[(R)-(-)-3-hydroxybutyrate] (PHB) operon and an extracellular PHB depolymerase gene, were used for the fermentative production of (R)-(-)-3-hydroxybutyrate (3HB). The concentration of 3HB in the culture supernatant of the mutant R. eutropha system reached about 30 mM after 5 d under anaerobic conditions, although it was about 4-10 mM under aerobic conditions. On the other hand, the 3HB concentration in the culture supernatant of the recombinant E. coli system reached about 70 mM after 4 d, indicating that about 70% of the glucose added was converted to 3HB.


Assuntos
Ácido 3-Hidroxibutírico/metabolismo , Cupriavidus necator/fisiologia , Escherichia coli/fisiologia , Hidroxibutirato Desidrogenase/genética , Hidroxibutirato Desidrogenase/metabolismo , Fermentação/fisiologia , Inativação Gênica/fisiologia , Mutação/genética , Proteínas Recombinantes/metabolismo
15.
J Bacteriol ; 187(20): 6982-90, 2005 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-16199568

RESUMO

A novel intracellular poly(3-hydroxybutyrate) (PHB) depolymerase (PhaZd) of Wautersia eutropha (formerly Ralstonia eutropha) H16 which shows similarity with the catalytic domain of the extracellular PHB depolymerase in Ralstonia pickettii T1 was identified. The positions of the catalytic triad (Ser190-Asp266-His330) and oxyanion hole (His108) in the amino acid sequence of PhaZd deduced from the nucleotide sequence roughly accorded with those of the extracellular PHB depolymerase of R. pickettii T1, but a signal peptide, a linker domain, and a substrate binding domain were missing. The PhaZd gene was cloned and the gene product was purified from Escherichia coli. The specific activity of PhaZd toward artificial amorphous PHB granules was significantly greater than that of other known intracellular PHB depolymerase or 3-hydroxybutyrate (3HB) oligomer hydrolases of W. eutropha H16. The enzyme degraded artificial amorphous PHB granules and mainly released various 3-hydroxybutyrate oligomers. PhaZd distributed nearly equally between PHB inclusion bodies and the cytosolic fraction. The amount of PHB was greater in phaZd deletion mutant cells than the wild-type cells under various culture conditions. These results indicate that PhaZd is a novel intracellular PHB depolymerase which participates in the mobilization of PHB in W. eutropha H16 along with other PHB depolymerases.


Assuntos
Hidrolases de Éster Carboxílico/genética , Hidrolases de Éster Carboxílico/metabolismo , Cupriavidus necator/enzimologia , Cupriavidus necator/genética , Sequência de Aminoácidos , Hidrolases de Éster Carboxílico/química , Deleção de Genes , Regulação Bacteriana da Expressão Gênica , Regulação Enzimológica da Expressão Gênica , Dados de Sequência Molecular , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Especificidade por Substrato
16.
J Bacteriol ; 187(15): 5129-35, 2005 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-16030206

RESUMO

Wautersia eutropha H16 (formerly Ralstonia eutropha) mobilizes intracellularly accumulated poly(3-hydroxybutyrate) (PHB) with intracellular poly(3-hydroxybutyrate) depolymerases. In this study, a novel intracellular 3-hydroxybutyrate-oligomer hydrolase (PhaZc) gene was cloned and overexpressed in Escherichia coli. Then PhaZc was purified and characterized. Immunoblot analysis with polyclonal antiserum against PhaZc revealed that most PhaZc is present in the cytosolic fraction and a small amount is present in the poly(3-hydroxybutyrate) inclusion bodies of W. eutropha. PhaZc degraded various 3-hydroxybutyrate oligomers at a high specific activity and artificial amorphous poly(3-hydroxybutyrate) at a lower specific activity. Native PHB granules and semicrystalline PHB were not degraded by PhaZc. A PhaZ deletion mutation enhanced the deposition of PHB in the logarithmic phase in nutrient-rich medium. PhaZc differs from the hydrolases of W. eutropha previously reported and is a novel type of intracellular 3-hydroxybutyrate-oligomer hydrolase, and it participates in the mobilization of PHB along with other hydrolases.


Assuntos
Hidrolases de Éster Carboxílico/metabolismo , Hidroxibutiratos/metabolismo , Poliésteres/metabolismo , Ralstonia/metabolismo , Sequência de Aminoácidos , Hidrolases de Éster Carboxílico/biossíntese , Hidrolases de Éster Carboxílico/genética , Clonagem Molecular , Escherichia coli/genética , Escherichia coli/metabolismo , Corpos de Inclusão/metabolismo , Dados de Sequência Molecular , Mutação , Filogenia , Ralstonia/enzimologia , Alinhamento de Sequência , Especificidade por Substrato
17.
Curr Microbiol ; 49(3): 199-202, 2004 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-15386104

RESUMO

The gene of an intracellular poly(3-hydroxybutyrate) (iPHB) depolymerase from Rhodobacter sphaeroides was cloned and sequenced. The nucleotide sequence of the cloned gene was homologous to that of the iPHB depolymerase gene from Ralstonia eutropha H16 (phaZ1(Reu)) and the gene was designated phaZ1(Rsh). PhaZ1(Rsh) was purified from E. coli harboring an expression vector containing phaZ1(Rsh) and its properties were examined. PhaZ1(Rsh) degraded amorphous PHB granules, and the 3-hydroxybutyrate tetramer and pentamer, but not crystalline PHB granules. The enzyme activity was inhibited by p-chloromercuribenzoate and Triton X-100. Diisopropylfluorophosphate, phenylmethylsulfonylfluoride, and dithiothreitol had no effect on the activity. A mutant having alanine instead of cysteine at 178 lost the activity. These results show that PhaZ1(Rsh) is a quite similar enzyme to PhaZ1(Reu).


Assuntos
Hidrolases de Éster Carboxílico/metabolismo , Rhodobacter sphaeroides/enzimologia , Sequência de Bases , Hidrolases de Éster Carboxílico/química , Hidrolases de Éster Carboxílico/genética , Domínio Catalítico/genética , Clonagem Molecular , Cisteína/química , DNA Bacteriano/genética , Escherichia coli/genética , Genes Bacterianos , Mutagênese Sítio-Dirigida , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Rhodobacter sphaeroides/genética
18.
Curr Microbiol ; 48(6): 424-7, 2004 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-15170237

RESUMO

Many poly-3-hydroxybutyrate (PHB)-degrading enzymes have been studied. But biological roles of 3HB-oligomer hydrolases (3HBOHs) and how PHB depolymerases (PHBDPs) and 3HBOHs cooperate in PHB metabolism are not fully elucidated. In this study, several PHBDPs and 3HBOHs from three types of bacteria were purified, and their substrate specificity, kinetic properties, and degradation products were investigated. From the results, PHBDP and 3HBOH seemed to play a role in PHB metabolism in three types of bacteria, as follows: (A) In Ralstonia pickettii T1, an extracellular PHBDP degrades extracellular PHB to various-sized 3HB-oligomers, which an extracellular 3HBOH hydrolyzes to 3HB-monomers. (B) In Acidovorax sp. SA1, an extracellular PHBDP hydrolyzes extracellular PHB to small 3HB-oligomers (dimer and trimer), which an intracellular 3HBOH efficiently degrades to 3HB in the cell. (C) In Ralstonia eutropha H16, an intracellular 3HBOH helps in the degradation of intracellular PHB inclusions by PHBDP.


Assuntos
Bactérias/enzimologia , Hidrolases de Éster Carboxílico/metabolismo , Hidroxibutiratos/metabolismo , Poliésteres/metabolismo , Ácido 3-Hidroxibutírico/metabolismo , Bactérias/metabolismo , Hidrolases de Éster Carboxílico/isolamento & purificação , Comamonadaceae/enzimologia , Comamonadaceae/metabolismo , Cupriavidus necator/enzimologia , Cupriavidus necator/metabolismo , Cinética , Ralstonia/enzimologia , Ralstonia/metabolismo , Especificidade por Substrato
19.
J Biosci Bioeng ; 97(1): 78-81, 2004.
Artigo em Inglês | MEDLINE | ID: mdl-16233594

RESUMO

D(-)-3-hydroxybutyrate dehydrogenase (BDH; EC 1.1.1.30) from a poly(D(-)-3-hydroxybutyrate) (PHB) degrading bacterium, Acidovorax sp. SA1, was purified using Toyopearl DEAE-650M, red-Sepharose CL-4B, and Q Sepharose FF. The molecular mass of the enzyme was estimated as 27 kDa by SDS-PAGE and 110 kDa by gel filtration. The gene encoding BDH was cloned and sequenced, and expressed in Escherichia coli. The gene product was purified in two steps with a high yield. The N-terminal amino acid sequence of the enzyme purified from E. coli agreed with that of the purified enzyme from strain SA1. The BDH of strain SA1 had high amino acid sequence homology to that of Ralstonia eutropha H16. The Km values for D(-)-3-hydroxybutyrate and NAD+ in the oxidation reaction were 4.5 x 10(-4) M and 8.9 x 10(-5) M, respectively. The Km values for acetoacetate and NADH in the reduction reaction were 2.4 x 10(-4) M and 2.9 x 10(-5) M, respectively.

20.
J Bacteriol ; 185(12): 3485-90, 2003 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-12775684

RESUMO

An intracellular 3-hydroxybutyrate (3HB)-oligomer hydrolase (PhaZ2(Reu)) of Ralstonia eutropha was purified from Escherichia coli harboring a plasmid containing phaZ2(Reu). The purified enzyme hydrolyzed linear and cyclic 3HB-oligomers. Although it did not degrade crystalline poly(3-hydroxybutyrate) (PHB), the purified enzyme degraded artificial amorphous PHB at a rate similar to that of the previously identified intracellular PHB (iPHB) depolymerase (PhaZ1(Reu)). The enzyme appeared to be an endo-type hydrolase, since it actively hydrolyzed cyclic 3HB-oligomers. However, it degraded various linear 3HB-oligomers and amorphous PHB in the fashion of an exo-type hydrolase, releasing one monomer unit at a time. PhaZ2 was found to bind to PHB inclusion bodies and as a soluble enzyme to cell-free supernatant fractions in R. eutropha; in contrast, PhaZ1 bound exclusively to the inclusion bodies. When R. eutropha H16 was cultivated in a nutrient-rich medium, the transient deposition of PHB was observed: the content of PHB was maximized in the log growth phase (12 h, ca. 14% PHB of dry cell weight) and decreased to a very low level in the stationary phase (ca. 1% of dry cell weight). In each phaZ1-null mutant and phaZ2-null mutant, the PHB content in the cell increased to ca. 5% in the stationary phase. A double mutant lacking both phaZ1 and phaZ2 showed increased PHB content in the log phase (ca. 20%) and also an elevated PHB level (ca. 8%) in the stationary phase. These results indicate that PhaZ2 is a novel iPHB depolymerase, which participates in the mobilization of PHB in R. eutropha along with PhaZ1.


Assuntos
Hidrolases de Éster Carboxílico/metabolismo , Cupriavidus necator/enzimologia , Western Blotting , Hidrolases de Éster Carboxílico/análise , Hidrolases de Éster Carboxílico/genética , Escherichia coli/metabolismo , Vetores Genéticos , Hidroxibutiratos/metabolismo , Corpos de Inclusão/metabolismo , Mutação , Poliésteres/metabolismo , Proteínas Recombinantes/biossíntese , Especificidade por Substrato
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