Validation of microplastic sample preparation method for freshwater samples.

The global presence of microplastics in the environment is well documented nowadays. Studies already showed the potential risks that microplastic particles might cause to the ecosystem, while potential human health effects are currently under investigation. As one of the main inputs of these crucial researches, the concentration of microplastics in the environment should be measured precisely, confidently and monitored regularly to determine exposure levels of these pollutants. Some study highlights, that the results are usually inconsistent and uncertain, due to different sampling and sample preparation methods and the lack of quality assurance and quality control of these processes. The need for a standardized methodology is an emerging issue, as this would provide the right tools to establish a global monitoring system of microplastics. Validated sample preparation methods of water (especially freshwater) samples for microplastic analysis are rarely described. To fulfil the gap, this study aims to create and validate a special toolset and the related standard operating procedure for enhanced sample preparation. A newly developed equipment, the Small Volume Glass Separator was designed to easily isolate microplastics from freshwater samples and concentrate the treated sample in a small volume, thus reducing the brine solution use and the sample transfer steps. These features enable better prevention of contamination and making sample preparation easy, fast and cost-effective. The Small Volume Glass Separator and the related standard operation procedure was validated on model freshwater and wastewater samples with the use of fluorescently tagged microplastics and environmentally relevant microplastics (fragments, fibres). Recoveries were measured with optical microscopy under UV light and with near-infrared spectroscopy/microscopy. Recovery tests with fluorescently tagged microspheres showed that average recovery with the Small Volume Glass Separator is 12-39% higher than that of a widespread sample preparation method. This procedure was also able to recover on average 64%±29% of all the environmentally relevant particles during the validation process. Results show that size and density have a great influence on potential particle loss. Recovery of smaller particles are less with both methods than that of the larger particles, but Small Volume Glass Separator yielded significantly higher recovery for more dense particles. The results of this study help to better understand particle loss during sample preparation and thus contribute to the establishment of standardised microplastic analysis processes.

Validation of pressurized fractionated filtration microplastic sampling in controlled test environment.

In the field of microplastic (MP) research in the environment, a significant amount of the currently reported results is uncertain because of the inappropriate methods of sampling, detection and quantification of MPs. Fortunately, many research groups are aware of these challenges, but validated methods, which are the prerequisite of standardized measurements, are scarce. Recovery tests are especially rare in the field of MP sampling. The aim of our research was to take a step forward and collect data on cascade filtration recoveries by modeling different turbulance conditions and sampling depth applying environmentally relevant MP concentrations while obtaining large sample volumes. As reference materials, different polymer types (polyethylene - PE; polypropylene - PP; poly[ethylene terephthalate] - PET; poly[vinyl chloride] - PVC; polyamide - PA) and shapes (sphere, fragment, fiber) were used, and for detection near-infrared spectroscopy/microscopy was applied. The developed method provides information not only on system based MP losses, but on sampling efficiency in a model environment as well. Based on the results, the highest recovery rate of all polymers was 31.4% on average, sampled from the water surface during continuous stirring. In these conditions, 92.4% of the PE spheres and 31.9% of the PE fragments were recovered. This indicates, particles reported in environmental monitoring studies might be less than the real environmental concentration. We can conclude, that surface sampling is more efficient than sampling in a deeper layer of the water column. Our research revealed, that the widespread application of microspheres as reference materials might lead to too optimistic recovery values. The application of reference particles (fragments, fibers) with higher environmental relevance shows much lower recovery rates. Our results highlight, that validating the efficiency of the whole sampling process from the environment is more important than measuring only the filtration device's recovery. This study helps us to better understand the relationship and the possible gaps between the reported MP results and the real-life concentrations in the environment.

Attenuated total reflection fourier transform infrared spectroscopy based methods for identification of chromatography media formulations used in downstream processes.

Chromatographic media play a crucial role in the downstream processing of biotechnology products. The physical and chemical properties of these processing aids are mostly monitored by expensive and time-consuming preparative tests, but spectroscopic techniques may also be used to measure chromatographic media samples. In this study, chromatographic media formulations used in downstream processes were investigated using attenuated total reflection Fourier transform infrared (ATR FT-IR) spectroscopy. Samples were measured both in original suspension form and after drying to examine the possibilities of a potential spectroscopic method without sample preparation. Principal component analysis (PCA) was employed to identify the spectral differences among the formulations with distinct support matrices and functional groups and soft independent modeling of class analogy (SIMCA) was performed to creating classification models for identification of chromatography media. To increase the number of samples in the SIMCA, simulated spectra were generated based on the experimental spectra. PCA models indicated that spectra of samples in original suspension form and after drying contained similar information about the chemical properties of chromatographic media samples. Moreover, during the classification of spectra based on SIMCA, both measurement techniques gave high sensitivity, specificity, positive predictive value (PPV) and negative predictive value (NPV) results. These results show that ATR FT-IR could be applied as a simple alternative method for monitoring the chromatography media samples. This technique is also feasible without sample preparation. Thereby the multi-hours drying steps may be omitted, the measurements can be performed in a few minutes, and the potential effects of sample preparations can be eliminated.

On-line glucose monitoring by near infrared spectroscopy during the scale up steps of mammalian cell cultivation process development.

NIR spectroscopy is a non-destructive tool for in-situ, on-line bioprocess monitoring. One of its most frequent applications is the determination of metabolites during cultivation, especially glucose. Previous studies have usually investigated the applicability of Near Infrared (NIR) spectroscopy at one bioreactor scale but the effect of scale up was not explored. In this study, the complete scale up from shake flask (1 L) through 20 L, 100 L and 1000 L up to 5000 L bioreactor volume level was monitored with on-line NIR spectroscopy. The differences between runs and scales were examined using principal component analysis. The bioreactor runs were relatively similar regardless of scales but the shake flasks differed strongly from bioreactor runs. The glucose concentration throughout five 5000 L scale bioreactor runs were predicted by partial least squares regression models that were based on pre-processed spectra of bioreactor runs and combinations of them. The model that produced the lowest error of prediction (4.18 mM on a 29 mM concentration range) for all five runs in the prediction set was based on the combination of 20 L and 100 L data. This result demonstrated the capabilities and the limitations of an NIR system for glucose monitoring in mammalian cell cultivations.

Comparison of multivariate data analysis techniques to improve glucose concentration prediction in mammalian cell cultivations by Raman spectroscopy.

In-situ Raman spectroscopy is frequently applied to monitor and even control the glucose concentration of monoclonal antibody producing mammalian cell cultivations. Previous studies used the PLSR algorithm only, however other multivariate algorithms were applied successfully for different protein production processes. In this study, four mammalian cell cultivation runs were followed with Raman spectroscopy and the spectra were analysed quantitatively and qualitatively as well. The PCA analysis showed that one of the most dominant factors in the Raman spectra were the concentration of glucose, which strongly correlated with the score values of the eighth principal component. This observation further substantiated that Raman spectroscopy is an excellent tool for bioprocess monitoring and induced the test of the Multivariate Linear Regression (MLR), Principal Component Regression (PCR) and Partial Least Squares Regression (PLSR) algorithms, using the results of the PCA as one of the variable selection techniques, to determine the glucose concentration during cultivation. However, the novel variable selection technique of PCA correlation enhanced only the model accuracy when it was applied with MLR and only model robustness was increased when it was used with PCR and PLSR because the relatively strong Raman signal of glucose concentration seemed to be enough to build an accurate model on. Therefore, PLSR, the most advanced algorithm of the three, delivered the lowest 2.21 mM RMSEP but it was demonstrated that in certain cases PCR could also produce satisfactorily results.

On-line prediction of the glucose concentration of CHO cell cultivations by NIR and Raman spectroscopy: Comparative scalability test with a shake flask model system.

In this study, near-infrared (NIR) and Raman spectroscopy were compared in parallel to predict the glucose concentration of Chinese hamster ovary cell cultivations. A shake flask model system was used to quickly generate spectra similar to bioreactor cultivations therefore accelerating the development of a working model prior to actual cultivations. Automated variable selection and several pre-processing methods were tested iteratively during model development using spectra from six shake flask cultivations. The target was to achieve the lowest error of prediction for the glucose concentration in two independent shake flasks. The best model was then used to test the scalability of the two techniques by predicting spectra of a 10l and a 100l scale bioreactor cultivation. The NIR spectroscopy based model could follow the trend of the glucose concentration but it was not sufficiently accurate for bioreactor monitoring. On the other hand, the Raman spectroscopy based model predicted the concentration of glucose in both cultivation scales sufficiently accurately with an error around 4mM (0.72g/l), that is satisfactory for the on-line bioreactor monitoring purposes of the biopharma industry. Therefore, the shake flask model system was proven to be suitable for scalable spectroscopic model development.

Method development and qualification of capillary zone electrophoresis for investigation of therapeutic monoclonal antibody quality.

Capillary electrophoresis techniques are widely used in the analytical biotechnology. Different electrophoretic techniques are very adequate tools to monitor size-and charge heterogenities of protein drugs. Method descriptions and development studies of capillary zone electrophoresis (CZE) have been described in literature. Most of them are performed based on the classical one-factor-at-time (OFAT) approach. In this study a very simple method development approach is described for capillary zone electrophoresis: a "two-phase-four-step" approach is introduced which allows a rapid, iterative method development process and can be a good platform for CZE method. In every step the current analytical target profile and an appropriate control strategy were established to monitor the current stage of development. A very good platform was established to investigate intact and digested protein samples. Commercially available monoclonal antibody was chosen as model protein for the method development study. The CZE method was qualificated after the development process and the results were presented. The analytical system stability was represented by the calculated RSD% value of area percentage and migration time of the selected peaks (<0.8% and <5%) during the intermediate precision investigation.

Capillary isoelectric focusing method development and validation for investigation of recombinant therapeutic monoclonal antibody.

Capillary isoelectric focusing (cIEF) is a basic and highly accurate routine analytical tool to prove identity of protein drugs in quality control (QC) and release tests in biopharmaceutical industries. However there are some "out-of-the-box" applications commercially available which provide easy and rapid isoelectric focusing solutions for investigating monoclonal antibody drug proteins. However use of these kits in routine testings requires high costs. A capillary isoelectric focusing method was developed and validated for identification testing of monoclonal antibody drug products with isoelectric point between 7.0 and 9.0. A method was developed providing good pH gradient for internal calibration (R(2)>0.99) and good resolution between all of the isoform peaks (R=2), minimizing the time and complexity of sample preparation (no urea or salt used). The method is highly reproducible and it is suitable for validation and method transfer to any QC laboratories. Another advantage of the method is that it operates with commercially available chemicals which can be purchased from any suppliers. The interaction with capillary walls (avoid precipitation and adsorption as far as possible) was minimized and synthetic isoelectric small molecular markers were used instead of peptide or protein based markers. The developed method was validated according to the recent ICH guideline (Q2(R1)). Relative standard deviation results were below 0.2% for isoelectric points and below 4% according to the normalized migration times. The method is robust to buffer components with different lot numbers and neutral capillaries with different type of inner coatings. The fluoro-carbon coated column was chosen because of costs-effectivity aspects.

Demonstration of an intramitochondrial invertase activity and the corresponding sugar transporters of the inner mitochondrial membrane in Jerusalem artichoke (Helianthus tuberosus L.) tubers.

Genetic evidences indicate that alkaline/neutral invertases are present in plant cell organelles, and they might have a novel physiological function in mitochondria. The present study demonstrates an invertase activity in the mitochondrial matrix of Helianthus tuberosus tubers. The pH optimum, the kinetic parameters and the inhibitor profile of the invertase activity indicated that it belongs to the neutral invertases. In accordance with this topology, transport activities responsible for the mediation of influx/efflux of substrate/products were studied in the inner mitochondrial membrane. The transport of sucrose, glucose and fructose was shown to be bidirectional, saturable and independent of the mitochondrial respiration and membrane potential. Sucrose transport was insensitive to the inhibitors of the proton-sucrose symporters. The different kinetic parameters and inhibitors as well as the absence of cross-inhibition suggest that sucrose, glucose and fructose transport are mediated by separate transporters in the inner mitochondrial membrane. The mitochondrial invertase system composed by an enzyme activity in the matrix and the corresponding sugar transporters might have a role in both osmoregulation and intermediary metabolism.