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BMC Res Notes ; 12(1): 825, 2019 Dec 26.
Artigo em Inglês | MEDLINE | ID: mdl-31878964

RESUMO

OBJECTIVE: Pabda (Ompok bimaculatus) is a freshwater catfish, largely available in Asian countries, especially in Bangladesh, India, Pakistan and Nepal. This fish is highly valued for its fabulous taste and high nutritional value and is very popular as a rich source of proteins, omega-3 and omega-6 fatty acids, vitamins and mineral for growing children, pregnant females and elders. We performed de-novo sequencing of Ompok bimaculatus using a hybrid approach and present here a draft assembly for this species for the first time. DATA DESCRIPTION: The genome of Ompok bimaculatus (Fig. 1: Table 1, Data file 3) from Ganges river, has been sequenced by hybrid approach using Illumina short reads and PacBio long reads followed by structural annotations. The draft genome assembly was found to be 718 Mb with N50 size of 81 kb. MAKER gene annotation tool predicted 21,371 genes.


Assuntos
Peixes-Gato/genética , Genoma , Animais , Água Doce , Sequenciamento de Nucleotídeos em Larga Escala , Índia , Anotação de Sequência Molecular , Sequenciamento Completo do Genoma
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