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1.
J Wildl Dis ; 44(2): 351-61, 2008 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-18436667

RESUMO

Birds in the order Charadriiformes were sampled at multiple sites in the eastern half of the continental USA, as well as at Argentina, Chile, and Bermuda, during 1999-2005, and tested for avian influenza virus (AIV). Of more than 9,400 birds sampled, AIV virus was isolated from 290 birds. Although Ruddy Turnstones (Arenaria interpres) comprised just 25% of birds sampled, they accounted for 87% of isolates. Only eight AIV isolations were made from birds at four locations outside of the Delaware Bay, USA, region; six of these were from gulls (Laridae). At Delaware Bay, AIV isolations were predominated by hemagglutinin (HA) subtype H10, but subtype diversity varied each year. These results suggest that AIV infection among shorebirds (Scolopacidae) may be localized, species specific, and highly variable in relation to AIV subtype diversity.


Assuntos
Charadriiformes/virologia , Vírus da Influenza A/isolamento & purificação , Influenza Aviária/epidemiologia , Animais , Animais Selvagens/virologia , Demografia , Feminino , Vírus da Influenza A/classificação , Vírus da Influenza A/patogenicidade , Influenza Aviária/transmissão , Masculino , Filogenia , Prevalência , Vigilância de Evento Sentinela/veterinária , Especificidade da Espécie
2.
Dev Biol (Basel) ; 126: 171-7; discussion 326-7, 2006.
Artigo em Inglês | MEDLINE | ID: mdl-17058492

RESUMO

Avian influenza (AI) is a highly contagious viral disease of poultry that is found worldwide. There are two forms of AI: a mild form called low pathogenicity avian influenza (LPAI), and a severe form called highly pathogenic avian influenza (HPAI). HPAI is associated with the H5 and H7 subtypes of AI virus (AIV) and is subject to Federal control and International reporting. A real-time reverse transcription-polymerase chain reaction (rRT-PCR) assay has been developed and validated that can help in the early detection of AI outbreaks. The rRT-PCR assay can also be used to identify infections caused by H5 and H7 subtypes of AIV New isolates of AIV must be characterized as LPAI or HPAI for reporting and control purposes. The criteria for classification of an AI virus as HPAI are defined by the World Organization for Animal Health (OIE); the definition includes a virulence and a molecular criterion. The virulence requirement for HPAI is defined as an AIV killing 75% or more of eight inoculated chickens within 10 days. The molecular criterion is the presence of multiple dibasic amino acids at the proteolytic cleavage site of the haemagglutinin (H) protein. All HPAI viruses isolated before 2002 fulfilled both the virulence and molecular criteria. Consequently, nucleotide sequencing of the H gene and deduction of the amino acid motif at the H cleavage site has been successfully used to assess the virulence of H5 and H7 AIVs rapidly. Since 2002, however, there have been three outbreaks of HPAI where the viruses responsible for the outbreaks have either fulfilled the virulence criterion or the molecular criterion, but not both.


Assuntos
Galinhas/virologia , Glicoproteínas de Hemaglutininação de Vírus da Influenza/genética , Vírus da Influenza A/genética , Vírus da Influenza A/patogenicidade , Influenza Aviária/diagnóstico , Influenza Aviária/virologia , Sequência de Aminoácidos , Animais , Glicoproteínas de Hemaglutininação de Vírus da Influenza/química , Vírus da Influenza A/isolamento & purificação , Doenças das Aves Domésticas/diagnóstico , Doenças das Aves Domésticas/virologia , Reação em Cadeia da Polimerase Via Transcriptase Reversa/métodos , Reação em Cadeia da Polimerase Via Transcriptase Reversa/veterinária
3.
Dev Biol (Basel) ; 124: 37-44, 2006.
Artigo em Inglês | MEDLINE | ID: mdl-16447492

RESUMO

Wild waterfowl and shorebirds are known to be the natural reservoir for influenza A viruses. Surveillance studies in waterfowl and shorebirds in North America show that influenza A viruses are repeatedly recovered from these birds. However, the virus recovery is influenced by geography, season, age and species of birds. In addition to the natural reservoir, the live-bird marketing system (LBMS) in certain regions of the United States has been recognized as a man-made reservoir of influenza viruses and has been linked to several outbreaks of low pathogenicity avian influenza (LPAI) in poultry. Outbreaks of LPAI in commercial poultry is attributed to movement of infected birds, dirty or improperly cleaned crates, and contaminated vehicles from the LBMS to poultry farms. However, in the majority of outbreaks in poultry, the source of infection is suspected to be wild aquatic birds or the source is unknown. Since 2002, three outbreaks of highly pathogenic avian influenza (HPAI) have occurred in the Americas; one each in Chile (H7N3), United States (H5N2), and Canada (H7N3). In each of these outbreaks, a precursor virus of low pathogenicity mutated to become highly pathogenic after circulating in poultry. The HPAI viruses recovered from the three outbreaks had unique molecular and phenotypic characteristics that do not conform to other known HPAI viruses. These findings emphasize the need for monitoring wild and domestic bird species for presence of influenza A viruses.


Assuntos
Surtos de Doenças/veterinária , Reservatórios de Doenças/veterinária , Vírus da Influenza A Subtipo H5N2/patogenicidade , Influenza Aviária/epidemiologia , Influenza Humana/epidemiologia , Fatores Etários , Animais , Evolução Biológica , Aves , Comércio , Geografia , Humanos , Influenza Aviária/transmissão , América do Norte/epidemiologia , Aves Domésticas , Fatores de Risco , América do Sul/epidemiologia , Especificidade da Espécie
4.
Avian Dis ; 49(2): 207-13, 2005 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-16094824

RESUMO

Five 34-wk-old turkey breeder layer flocks in separate houses of 2550 birds each in a single farm in Ohio experienced a drop in egg production from late January to early February 2004. Tracheal swabs (n = 60), cloacal swabs (n = 50), and convalescent sera (n = 110) from the flocks were submitted to the laboratory for diagnostics. Virus isolation was attempted in specific-pathogen free embryonating chicken eggs and Vero and MDCK cells. Virus characterization was performed using agar gel immunodiffusion, the hemagglutination test, the hemagglutination inhibition test, the virus neutralization test, reverse transcription-polymerase chain reaction, sequencing, and phylogenetic analysis. A presumptive influenza virus was successfully propagated and isolated on the first passage in MDCK cells, but initially not in Vero cells or specific-pathogen free chicken embryos. After two passages in MDCK cells, it was possible to propagate the isolate in specific-pathogen free chicken embryos. Preliminary sequence analysis of the isolated virus confirmed that it was influenza A virus with almost 100% (235/236) identity with the matrix gene of a swine influenza A virus, A/Swine/Illinois/100084/01 (H1N2). However, it was not possible to subtype the virus using conventional serotyping methods. The results of genetic characterization of the isolated virus showed that it was the H3N2 subtype and was designated as A/Turkey/OH/313053/04 (H3N2). Phylogenetic analysis of the eight gene segments of the virus showed that A/Turkey/OH/313053/04 (H3N2) isolate was most closely related to the triple-reassortant H3N2 swine viruses [A/Swine/WI/14094/99 (H3N2)] that have been circulating among pigs in the United States since 1998, which contains gene segments from avian, swine, and human viruses. The A/Turkey/OH/313053/04 (H3N2) isolated from turkeys in this study was classified as a low pathogenic avian influenza A virus because it only caused a drop in egg production with minor other clinical signs and no mortality.


Assuntos
Vírus da Influenza A Subtipo H3N2 , Vírus da Influenza A/genética , Filogenia , Perus/virologia , Animais , Sequência de Bases , Embrião de Galinha , Chlorocebus aethiops , Primers do DNA , Testes de Hemaglutinação/veterinária , Imunodifusão/veterinária , Vírus da Influenza A/classificação , Dados de Sequência Molecular , Testes de Neutralização/veterinária , Ohio , Reação em Cadeia da Polimerase Via Transcriptase Reversa/veterinária , Análise de Sequência de DNA/veterinária , Organismos Livres de Patógenos Específicos , Células Vero
5.
Dev Biol (Basel) ; 119: 165-70, 2004.
Artigo em Inglês | MEDLINE | ID: mdl-15742628

RESUMO

Vaccination for Newcastle disease (ND) is routinely practised in countries where virulent strains of the Newcastle disease virus (NDV) are endemic and in countries where virulent strains do not exist but ill-timed infection by a low virulent field strain may have significant economic consequences for the producer. The types of vaccines and vaccination schedules used vary depending on the potential threat, virulence of the field challenge virus, type of production, and production schedules. A combination of live and inactivated ND vaccine, administered simultaneously, is shown to provide better protection against virulent NDV and has been successfully used in control programmes in areas of intense poultry production. A potential limiting factor in the use of live vaccines to control virulent ND is that live virus can interfere with surveillance and laboratory diagnosis. However, a new assay, the real-time reverse transcriptase-polymerase chain reaction (RRT-PCR), differentiates low virulent from virulent NDV, thus minimizing the disadvantage of live virus vaccines in the face of an outbreak and may facilitate the use of such vaccines to control outbreaks of virulent ND in the future.


Assuntos
Doença de Newcastle/prevenção & controle , Vírus da Doença de Newcastle/imunologia , Vacinação/veterinária , Animais , Doença de Newcastle/diagnóstico , Vírus da Doença de Newcastle/patogenicidade , Aves Domésticas , Reação em Cadeia da Polimerase Via Transcriptase Reversa/veterinária , Vacinas Atenuadas , Vacinas de Produtos Inativados , Vacinas Virais
6.
Avian Dis ; 47(3 Suppl): 798-805, 2003.
Artigo em Inglês | MEDLINE | ID: mdl-14575067

RESUMO

Between 1997 and 2001, there was one report of highly pathogenic avian influenza (HPAI) in the Western Hemisphere and Pacific Basin. In 1997, in New South Wales, Australia, an outbreak caused by avian influenza (AI) virus subtype H7N4 involved both chickens and emus. All other reports of infections in poultry and isolations from wild bird species in the region pertained to low pathogenicity (LP) AI virus. Animal Health Officials in Canada reported isolations of subtypes H1, H6, H7, and H10 from domestic poultry and subtypes H3 and H13 from imported and wild bird species. In Mexico, the H5N2 LPAI virus, the precursor of the HPAI outbreak in 1994-95, was isolated from poultry in each year from 1997 to 2001. Since 1997, Mexico has used approximately 708 million doses of a killed H5N2 vaccine and an additional 459 million doses of a recombinant fowlpox-H5 vaccine in their H5N2 control program. In Central America, avian influenza was diagnosed for the first time when H5N2 LPAI virus was isolated from chickens in Guatemala and El Salvador in 2000 and 2001, respectively. The H5N2 virus was genetically similar to the H5N2 virus found in Mexico. Surveillance activities in the United States resulted in the detection of AI virus or specific antibodies in domestic poultry from 24 states. Eleven of the fifteen hemagglutinin (H1, H2, H3, H4, H5, H6, H7, H9, H10, H11, and H13) and eight of the nine neuraminidase (N1, N2, N3, N4, N6, N7, N8, and N9) subtypes were identified. Two outbreaks of LPAI virus were reported in commercial table-egg producing chickens; one caused by H7N2 virus in Pennsylvania in 1996-98 and the other caused by H6N2 virus in California in 2000-01. In addition, isolations of H5 and H7 LPAI virus were recovered from the live-bird markets (LBMs) in the northeast United States.


Assuntos
Vírus da Influenza A , Influenza Aviária/epidemiologia , Doenças das Aves Domésticas/virologia , América/epidemiologia , Animais , Animais Domésticos , Animais Selvagens , Austrália/epidemiologia , Aves , Geografia , Vírus da Influenza A/patogenicidade , Ilhas do Pacífico/epidemiologia , Doenças das Aves Domésticas/epidemiologia
7.
Avian Dis ; 47(3 Suppl): 867-71, 2003.
Artigo em Inglês | MEDLINE | ID: mdl-14575079

RESUMO

Although wild ducks are known to be a major reservoir for avian influenza viruses (AIV), there are few recent published reports of surveillance directed at this group. Predominant AIV hemagglutinin (HA) subtypes reported in previous studies of ducks in North America include H3, H4, and H6, with the H5, H7, and H9 subtypes not well represented in these host populations. The objective of this study was to determine whether these subtype patterns have persisted. Each September from 1998 to 2000, cloacal swabs were collected from wild ducks banded in Roseau and Marshall counties, MN. Mallards (Anas platyrhynchos) were sampled all years, and northern pintails (A. acuta) were sampled only in 1999. Influenza viruses were isolated from 11%, 14%, and 8% of birds during 1998, 1999, and 2000, respectively. Prevalence, as expected, was highest in juveniles, ranging from 11% to 23% in mallards. Viruses representative of the HA subtypes 2, 3, 4, 5, 6, 7, 9, 10, 11, and 12 were isolated. Viruses in the H5, H7, and H9 subtypes, which are associated with high-pathogenicity influenza in poultry or recent infections in humans, were not uncommon, and each of these subtypes was isolated in 2 out of the 3 years of surveillance.


Assuntos
Doenças das Aves/virologia , Patos/virologia , Vírus da Influenza A/isolamento & purificação , Influenza Aviária/epidemiologia , Animais , Animais Selvagens , Doenças das Aves/epidemiologia , Patos/classificação , Vírus da Influenza A/classificação , Vírus da Influenza A/patogenicidade , Minnesota/epidemiologia , Prevalência , Especificidade da Espécie
8.
Avian Dis ; 47(3 Suppl): 888-97, 2003.
Artigo em Inglês | MEDLINE | ID: mdl-14575082

RESUMO

Avian influenza is endemic in wild birds in North America, and the virus routinely has been transmitted from this reservoir to poultry. Influenza, once introduced into poultry, can become endemic within the poultry population. It may be successfully eradicated by human intervention, or the virus may fail to successfully spread on its own. In the last 5 yr, influenza virus has been isolated from poultry in the United States on numerous occasions, and, with the use of molecular epidemiology, the relationships of these different viruses can be determined. There are 15 different hemagglutinin subtypes of avian influenza viruses, but infections with virus of H5 and H7 subtypes are of the most concern because of the potential for these viruses to mutate to the highly pathogenic form of the virus. Most of the influenza isolations in the United States have been associated with the live-bird markets (LBMs) in the Northeast. This has included primarily H7N2 influenza viruses, but also H7N3, H5N2, and other subtypes. Most of the H7N2 viruses were part of a single lineage that was first observed in 1994, but new introductions of H7N2 and H7N3 were also observed. The predominant H7N2 LBM lineage of virus spread to large commercial poultry operations on at least three occasions since 1997, with the largest outbreak occurring in Virginia in 2002. The H5N2 viruses in the LBMs included viruses from domestic ducks, gamebirds, and environmental samples. Some H5N2 viruses isolated in different years and in different locations had a high degree of sequence relatedness, although the reservoir source, if it is endemic, has not been identified. Finally, an H1N2 virus, associated with a drop in egg production, was isolated from turkeys in Missouri in 1999. This virus was a complex reassortant with swine, human, and avian influenza genes that was similar to recent swine isolates from the Midwest. Additional serologic evidence suggests that flocks in other states were infected with a H1N2 virus.


Assuntos
Vírus da Influenza A/genética , Influenza Aviária/epidemiologia , Doenças das Aves Domésticas/epidemiologia , Animais , Vírus da Influenza A/classificação , América do Norte/epidemiologia , Filogenia , Aves Domésticas/classificação , Doenças das Aves Domésticas/virologia
9.
Avian Dis ; 47(3 Suppl): 898-904, 2003.
Artigo em Inglês | MEDLINE | ID: mdl-14575083

RESUMO

Surveillance for H5 and H7 subtypes of avian influenza virus (AIV) in the live-bird markets (LBMs) of the northeastern United States has been in effect since 1986 when the markets were first recognized as a potential reservoir for AIV. Long-term maintenance of AIV in the LBM system has been documented. However, little is known about the influence of successive cycles of replication in unnatural avian hosts (gallinaceous birds) on the genetics of the virus, especially in the region of the hemagglutinin (HA) gene that can influence pathogenicity. Isolation of low-pathogenicity H5 AIVs from the LBMs has been sporadic; however, in 1994 a low-pathogenicity H7N2 virus was isolated that has persisted in the LBMs for more than 7 yr. Efforts to eliminate the H7 virus from the markets have been unsuccessful. During the 7-yr period, several molecular changes have occurred at the hemagglutinin cleavage site of the H7 virus. These changes include substitutions of proline for threonine and lysine for asparagine, respectively, at the -2 and -5 positions of the HA1 protein. In addition, there has been a 24 nucleotide base-pair deletion in the receptor binding region of the HA1. The accumulation of an additional basic amino acid at the cleavage site is a cause for concern to regulatory authorities, and, therefore, efforts to eliminate the virus from the LBM system have been intensified.


Assuntos
Vírus da Influenza A/genética , Influenza Aviária/virologia , Doenças das Aves Domésticas/virologia , Sequência de Aminoácidos , Animais , Hemaglutininas Virais/química , Hemaglutininas Virais/genética , Vírus da Influenza A/classificação , Vírus da Influenza A/isolamento & purificação , New England/epidemiologia , Filogenia , Aves Domésticas , Alinhamento de Sequência , Homologia de Sequência de Aminoácidos
10.
Avian Dis ; 47(3 Suppl): 951-5, 2003.
Artigo em Inglês | MEDLINE | ID: mdl-14575093

RESUMO

The introduction of an influenza A virus possessing a novel hemagglutinin (HA) into an immunologically naive human population has the potential to cause severe disease and death. Such was the case in 1997 in Hong Kong, where H5N1 influenza was transmitted to humans from infected poultry. Because H5N1 viruses are still isolated from domestic poultry in southern China, there needs to be continued surveillance of poultry and characterization of virus subtypes and variants. This study provides molecular characterization and evaluation of pathogenesis of a recent H5N1 virus isolated from duck meat that had been imported to South Korea from China. The HA gene of A/Duck/Anyang/AVL-1/01 (H5N1) isolate was found to be closely related to the Hong Kong/97 H5N1 viruses. This virus also contained multiple basic amino acids adjacent to the cleavage site between HA1 and HA2, characteristic of high-pathogenicity avian influenza viruses (HPAI). The pathogenesis of this virus was characterized in chickens, ducks, and mice. The DK/Anyang/AVL-1/01 isolate replicated well in all species and resulted in 100% and 22% lethality for chickens and mice, respectively. No clinical signs of disease were observed in DK/Anyang/AVL-1/01-inoculated ducks, but high titers of infectious virus could be detected in multiple tissues and oropharyngeal swabs. The presence of an H5N1 influenza virus in ducks bearing a HA gene that is highly similar to those of the pathogenic 1997 human/poultry H5N1 viruses raises the possibility of reintroduction of HPAI to chickens and humans.


Assuntos
Patos/virologia , Virus da Influenza A Subtipo H5N1 , Vírus da Influenza A/patogenicidade , Carne/virologia , Animais , Galinhas , China , Glicoproteínas de Hemaglutininação de Vírus da Influenza/isolamento & purificação , Vírus da Influenza A/classificação , Vírus da Influenza A/isolamento & purificação , Influenza Aviária/transmissão , Coreia (Geográfico) , Masculino , Camundongos , Camundongos Endogâmicos BALB C
11.
Avian Dis ; 47(3 Suppl): 996-1001, 2003.
Artigo em Inglês | MEDLINE | ID: mdl-14575100

RESUMO

In 2001, all 109 retail live-bird markets (LBMs) in New York and New Jersey were surveyed for the presence of avian influenza virus (AIV) by a real time reverse transcriptase/polymer chain reaction assay (RRT/PCR) and results compared to virus isolation (VI) in embryonating chicken eggs. The RRT/PCR had a 91.9% sensitivity and 97.9% specificity in detecting presence of AIV at the market level. However, the sensitivity at the sample level is 65.87%. The RRT/PCR is a reliable method to identify AIV at the market level. In addition, a cross-sectional epidemiologic study of the LBMs showed that, during the past 12 months, markets that were open 7 days per week and those that also sold rabbits had the highest risk for being positive for AIV. Markets that were closed one or more days per week and those that performed daily cleaning and disinfecting had the lowest risk for being AIV positive.


Assuntos
Vírus da Influenza A/isolamento & purificação , Influenza Aviária/epidemiologia , Doenças das Aves Domésticas/epidemiologia , Animais , Vírus da Influenza A/classificação , Influenza Aviária/prevenção & controle , New Jersey/epidemiologia , Cidade de Nova Iorque/epidemiologia , Razão de Chances , Aves Domésticas/virologia , Doenças das Aves Domésticas/prevenção & controle , Reprodutibilidade dos Testes , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Medição de Risco , Sensibilidade e Especificidade , Inquéritos e Questionários
12.
Avian Dis ; 47(3 Suppl): 1051-6, 2003.
Artigo em Inglês | MEDLINE | ID: mdl-14575109

RESUMO

Previously, we have shown that intramuscular vaccination of chickens with the eukaryotic expression vector (EEV), expressing the influenza H5 hemagglutinin (H) protein, can stimulate a measurable and protective antibody response. Based on these results, we cloned other H genes from Eurasian H5, North American and Eurasian H7, and H15 influenza viruses into the EEV for use in vaccination of chickens to produce reference antibodies for diagnostic purposes, such as the hemagglutination inhibition (HI) test. Three-week-old specific pathogen free (SPF) chickens were vaccinated with 100 microg of EEV mixed with a cationic lipid by intramuscular injection. Then the birds were boostered twice at monthly intervals after the original vaccination. Measurable antibody titers were present for most birds after 1 month and generally increased after each boost. To examine the cross reactivity of the sera with other subtypes, HI test was conducted with antigens prepared from 15 subtypes of influenza virus. Subtype specificity of the antisera prepared by DNA vaccination were comparable or better than the antisera prepared by traditional method using whole virus vaccination. Preparation of reference antisera by DNA vaccination holds good promise because it is safe and allows for the production of H specific antibodies without producing antibodies specific to other influenza viral proteins.


Assuntos
Glicoproteínas de Hemaglutininação de Vírus da Influenza/imunologia , Vírus da Influenza A/imunologia , Vacinas contra Influenza/administração & dosagem , Influenza Aviária/imunologia , Vacinas de DNA/administração & dosagem , Animais , Anticorpos Antivirais/sangue , Galinhas , Reações Cruzadas , Testes de Inibição da Hemaglutinação , Glicoproteínas de Hemaglutininação de Vírus da Influenza/classificação , Soros Imunes , Vírus da Influenza A/classificação , Influenza Aviária/prevenção & controle , Injeções Intramusculares , Filogenia , Doenças das Aves Domésticas/imunologia , Doenças das Aves Domésticas/prevenção & controle , Sensibilidade e Especificidade , Fatores de Tempo
13.
Avian Dis ; 47(3 Suppl): 1079-82, 2003.
Artigo em Inglês | MEDLINE | ID: mdl-14575115

RESUMO

A real-time reverse transcriptase/polymerase chain reaction (RRT-PCR) assay was developed using hydrolysis probes for the detection of avian influenza virus (AIV) and the H5 and H7 subtypes. The AIV specific primers and probes were directed to regions of the AIV matrix gene that are conserved among most type A influenza viruses. The H5 and H7 primers and probes are directed to H5 and H7 hemagglutinin gene regions that are conserved among North American avian influenza viruses. The sensitivity and specificity of this RRT-PCR assay was compared to virus isolation (VI) in chicken embryos with 1550 clinical swab samples from 109 live-bird markets (LBMs) in New York and New Jersey. RRT-PCR detected influenza in samples from 61 of 65 (93.8%) of the LBMs that were the sources of VI positive samples. Of the 58 markets that were positive for H7 influenza by hemagglutination inhibition assay, RRT-PCR detected H7 influenza in 56 markets (96.5%). Too few H5 positive samples were obtained to validate the H5 RRT-PCR assay in this study. Although RRT-PCR was less sensitive than VI on an individual sample basis, this study demonstrated that the AIV and H7 RRT-PCR assays are good tools for the rapid screening of flocks and LBMs.


Assuntos
Vírus da Influenza A/patogenicidade , Influenza Aviária/diagnóstico , Doenças das Aves Domésticas/virologia , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Animais , Doenças das Aves/diagnóstico , Doenças das Aves/virologia , Galinhas , Patos , Ensaio de Imunoadsorção Enzimática/métodos , Vírus da Influenza A/isolamento & purificação , Doenças das Aves Domésticas/diagnóstico , Sensibilidade e Especificidade , Struthioniformes
14.
Avian Dis ; 47(3 Suppl): 1087-90, 2003.
Artigo em Inglês | MEDLINE | ID: mdl-14575117

RESUMO

A multiplex real-time reverse transcriptase-polymerase chain reaction (RRT-PCR) assay for the simultaneous detection of the H5 and H7 avian influenza hemagglutinin (HA) subtypes was developed with hydrolysis type probes labeled with the FAM (H5 probe) and ROX (H7 probe) reporter dyes. The sensitivity of the H5-H7 subtyping assay was determined, using in vitro transcribed RNA templates, to have a reproducible detection limit for H7 of approximately 10(4) HA gene copies and approximately 10(4)-10(5) HA gene copies of H5. A direct comparison of H5-H7 multiplex RRT-PCR with hemagglutination inhibition (HI) was performed with 83 AI RRT-PCR and virus isolation positive tracheal and cloacal swab samples obtained from various avian species and environmental swabs from live-bird markets in New York and New Jersey. Both multiplex RRT-PCR and HI agreed on the subtype determination of 79 (95.2%) of the 83 samples, of which 77 were positive for H7 and two were determined to be non-H5/non-H7 subtypes. No samples were determined to be the H5 subtype by either assay.


Assuntos
Vírus da Influenza A/isolamento & purificação , Influenza Aviária/diagnóstico , Reação em Cadeia da Polimerase/métodos , Reação em Cadeia da Polimerase Via Transcriptase Reversa , Animais , Testes de Inibição da Hemaglutinação , Vírus da Influenza A/classificação , Vírus da Influenza A/genética , Aves Domésticas/virologia , Doenças das Aves Domésticas/diagnóstico , RNA Viral/genética , RNA Viral/isolamento & purificação , Transcrição Gênica
15.
Avian Dis ; 47(3 Suppl): 1091-5, 2003.
Artigo em Inglês | MEDLINE | ID: mdl-14575118

RESUMO

An avian influenza (AI) real time reverse transcriptase-polymerase chain reaction (RRT-PCR) test was previously shown to be a rapid and sensitive method to identify AI virus-infected birds in live-bird markets (LBMs). The test can also be used to identify avian influenza virus (AIV) from environmental samples. Consequently, the use of RRT-PCR was being considered as a component of the influenza eradication program in the LBMs to assure that each market was properly cleaned and disinfected before allowing the markets to be restocked. However, the RRT-PCR test cannot differentiate between live and inactivated virus, particularly in environmental samples where the RRT-PCR test potentially could amplify virus that had been inactivated by commonly used disinfectants, resulting in a false positive test result. To determine whether this is a valid concern, a study was conducted in three New Jersey LBMs that were previously shown to be positive for the H7N2 AIV. Environmental samples were collected from all three markets following thorough cleaning and disinfection with a phenolic disinfectant. Influenza virus RNA was detected in at least one environmental sample from two of the three markets when tested by RRT-PCR; however, all samples were negative by virus isolation using the standard egg inoculation procedure. As a result of these findings, laboratory experiments were designed to evaluate several commonly used disinfectants for their ability to inactivate influenza as well as disrupt the RNA so that it could not be detected by the RRT-PCR test. Five disinfectants were tested: phenolic disinfectants (Tek-trol and one-stroke environ), a quaternary ammonia compound (Lysol no-rinse sanitizer), a peroxygen compound (Virkon-S), and sodium hypochlorite (household bleach). All five disinfectants were effective at inactivating AIV at the recommended concentrations, but AIV RNA in samples inactivated with phenolic and quaternary ammonia compounds could still be detected by RRT-PCR. The peroxygen and chlorine compounds were effective at some concentrations for both inactivating virus and preventing amplification by RRT-PCR. Therefore, the RRT-PCR test can potentially be used to assure proper cleaning and disinfection when certain disinfectants are used.


Assuntos
Desinfetantes/farmacologia , Vírus da Influenza A/isolamento & purificação , Carne/virologia , Reação em Cadeia da Polimerase/métodos , Animais , Vírus da Influenza A/classificação , Vírus da Influenza A/genética , Aves Domésticas/virologia , Reação em Cadeia da Polimerase Via Transcriptase Reversa
16.
Avian Dis ; 47(3 Suppl): 1107-10, 2003.
Artigo em Inglês | MEDLINE | ID: mdl-14575122

RESUMO

Virus surveillance in free-flying, nonmigratory ducks living on the eastern shore of Maryland indicated that influenza A viruses were introduced into the area or that the prevalence of endemic infections increased between July 15 and August 27, 1998. Cloacal swabs collected between May 28 and July 15, 1998, were negative for influenza A virus recovery (0/233), whereas 13.9% (29/209) of swabs collected between August 27 and September 2, 1998, were positive for influenza A virus recovery. Five hemagglutinin subtypes (H2, H3, H6, H9, and H12), six neuraminidase subtypes (N1, N2, N4, N5, N6, and N8), and nine HA-NA combinations were identified among 29 influenza A isolates. Interestingly, 18 of the 29 isolates initially appeared to contain two or more HA and/or NA subtypes. The free-flying, nonmigratory ducks served as excellent sentinels for the early detection of type A influenza viruses in the southern half of the Atlantic Migratory Waterfowl Flyway during the earliest phase of the yearly southern migration.


Assuntos
Patos/virologia , Vírus da Influenza A/classificação , Migração Animal , Animais , Animais Selvagens , Doenças das Aves/diagnóstico , Doenças das Aves/virologia , Patos/classificação , Hemaglutininas Virais/classificação , Hemaglutininas Virais/genética , Hemaglutininas Virais/isolamento & purificação , Vírus da Influenza A/imunologia , Vírus da Influenza A/isolamento & purificação , Influenza Aviária/diagnóstico , Influenza Aviária/prevenção & controle , Maryland , Neuraminidase/classificação , Neuraminidase/isolamento & purificação
17.
Avian Dis ; 47(3 Suppl): 1111-3, 2003.
Artigo em Inglês | MEDLINE | ID: mdl-14575123

RESUMO

Low-pathogenic avian influenza virus (AV) continues to be isolated from the live bird markets (LBMs) in the Northeasten United States. Recent years have seen increasing numbers of these markets opening and an expansion of the type of animals they sell in conjunction with traditional live poultry. Specific-pathogen-free chickens were released into the livestock area of 13 New York City LBMs and then tested for evidence of AIV. We were able to recover virus or demonstrate seroconversion among the chickens introduced to four of the markets.


Assuntos
Aves/virologia , Indústria Alimentícia/normas , Vírus da Influenza A/patogenicidade , Agricultura/normas , Animais , Galinhas , Vírus da Influenza A/isolamento & purificação , Influenza Aviária/diagnóstico , Influenza Aviária/prevenção & controle , New England , Cidade de Nova Iorque , Doenças das Aves Domésticas/diagnóstico , Doenças das Aves Domésticas/prevenção & controle , Controle de Qualidade
18.
J Gen Virol ; 84(Pt 8): 2169-2178, 2003 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-12867649

RESUMO

The genes encoding the putative small hydrophobic (SH), attachment (G) and polymerase (L) proteins of the Colorado isolate of subgroup C avian pneumovirus (APV) were entirely or partially sequenced. They all included metapneumovirus (MPV)-like gene start and gene end sequences. The deduced Colorado SH protein shared 26.9 and 21.7 % aa identity with its counterpart in human MPV (hMPV) and APV subgroup A, respectively, but its only significant aa similarities were to hMPV. Conserved features included a common hydrophobicity profile with an unique transmembrane domain and the conservation of most extracellular cysteine residues. The Colorado putative G gene encoded several ORFs, the longer of which encoded a 252 aa long type II glycoprotein with aa similarities to hMPV G only (20.6 % overall aa identity with seven conserved N-terminal residues). The putative Colorado G protein shared, at best, 21.0 % aa identity with its counterparts in the other APV subgroups and did not contain the extracellular cysteine residues and short aa stretch highly conserved in other APVs. The N-terminal end of the Colorado L protein exhibited 73.6 and 54.9 % aa identity with hMPV and APV subgroup A, respectively, with four aa blocks highly conserved among Pneumovirus: Phylogenetic analysis performed on the nt sequences confirmed that the L sequences from MPVs were genetically related, whereas analysis of the G sequences revealed that among MPVs, only APV subgroups A, B and D clustered together, independently of both the Colorado isolate and hMPV, which shared weak genetic relatedness at the G gene level.


Assuntos
Doenças das Aves/virologia , Variação Genética , Proteína HN/genética , Metapneumovirus/classificação , Proteínas Oncogênicas de Retroviridae/genética , Análise de Sequência de DNA , Sequência de Aminoácidos , Animais , Aves , RNA Polimerases Dirigidas por DNA/genética , Genes Virais , Humanos , Metapneumovirus/genética , Dados de Sequência Molecular , Infecções por Paramyxoviridae/virologia , Filogenia , Proteínas do Envelope Viral
19.
Avian Dis ; 46(1): 111-21, 2002.
Artigo em Inglês | MEDLINE | ID: mdl-11922322

RESUMO

Type A influenza viruses can infect a wide range of birds and mammals, but influenza in a particular species is usually considered to be species specific. However, infection of turkeys with swine H1N1 viruses has been documented on several occasions. This report documents the isolation of an H1N2 influenza virus from a turkey breeder flock with a sudden drop in egg production. Sequence analysis of the virus showed that it was a complex reassortant virus with a mix of swine-, human-, and avian-origin influenza genes. A swine influenza virus with a similar gene complement was recently reported from pigs in Indiana. Isolation and identification of the virus required the use of nonconventional diagnostic procedures. The virus was isolated in embryonated chicken eggs by the yolk sac route of inoculation rather than by the typical chorioallantoic sac route. Interpretation of hemagglutination-inhibition test results required the use of turkey rather than chicken red blood cells, and identification of the neuraminidase subtype required the use of alternative reference sera in the neuraminidase-inhibition test. This report provides additional evidence that influenza viruses can cross species and cause a disease outbreak, and diagnosticians must be aware that the variability of influenza viruses can complicate the isolation and characterization of new isolates.


Assuntos
Vírus da Influenza A/genética , Influenza Humana/veterinária , Doenças das Aves Domésticas/virologia , Vírus Reordenados/genética , Perus , Animais , Diagnóstico Diferencial , Feminino , Testes de Inibição da Hemaglutinação/veterinária , Humanos , Vírus da Influenza A/isolamento & purificação , Influenza Humana/diagnóstico , Influenza Humana/transmissão , Influenza Humana/virologia , Filogenia , Doenças das Aves Domésticas/diagnóstico , Doenças das Aves Domésticas/transmissão , Vírus Reordenados/classificação , Vírus Reordenados/isolamento & purificação , Especificidade da Espécie , Suínos
20.
Avian Dis ; 45(3): 581-92, 2001.
Artigo em Inglês | MEDLINE | ID: mdl-11569730

RESUMO

Conventional nested and TaqMan reverse transcription-polymerase chain reaction (RT-PCR) assays for the detection of avian pneumovirus (APV) were evaluated and compared with virus isolation (VI) for sensitivity and specificity. Respiratory tissues and tracheal swabs were collected from experimentally inoculated turkeys between 1 and 21 days postinoculation (DPI) and tested by all detection methods. APV was detected by both RT-PCR procedures as early as 1 DPI and as late as 17 DPI, whereas virus was isolated only between 3 and 7 DPI. Pooled tracheal swab supernatant and dry swabs were excellent specimens for the detection of APV between 3 and 8 DPI. Turbinate and sinus specimens were the most productive samples over the entire collection period. Both RT-PCR assays were rapid and more sensitive than VI for the detection of APV in tissue and swab specimens from infected turkeys. RT-PCR allows for the rapid detection of APV from a variety of respiratory tissues as well as from dry swabs and tracheal swab supernatants. Antibody to APV was detected in 50% of the sampled APV-inoculated birds at 8 and 9 DPI by enzyme-linked immunosorbent assay (ELISA). Early seroconversion (8-10 DPI) allows antibody detection to be used as a screening tool for APV. Rapid and sensitive detection methods are needed for APV, a highly contagious disease affecting U.S. poultry.


Assuntos
Infecções por Pneumovirus/veterinária , Pneumovirus/isolamento & purificação , Doenças das Aves Domésticas/diagnóstico , Perus , Animais , Anticorpos Antivirais/sangue , Ensaio de Imunoadsorção Enzimática/veterinária , Pneumovirus/genética , Pneumovirus/imunologia , Infecções por Pneumovirus/diagnóstico , Doenças das Aves Domésticas/virologia , Sistema Respiratório/virologia , Reação em Cadeia da Polimerase Via Transcriptase Reversa/veterinária , Sensibilidade e Especificidade , Traqueia/virologia
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