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1.
PLoS One ; 15(10): e0240170, 2020.
Artigo em Inglês | MEDLINE | ID: mdl-33007011

RESUMO

All results in this paper are based upon a new dataset consisting in 60 Swadesh lists of 207 items, overall 12,420 terms collected during 2018-2019. Each list corresponds to a different variety of Malagasy, which is not simply identified by the name of the ethnicity but also by the precise location where the variety was collected. This is very important since some traditional ethnic groups are a heritage of historical events rather than representing communities with similar habits and dialects. This new dataset is by far the best available, both for dimension and completeness. The varieties are classified both by standard tools, as the trees generated by UPGMA and NJ which privilege genealogy by detecting vertical transmissions, and by a new method which privileges horizontal exchanges. The new method results in a two-dimensional chart of Madagascar which realistically reproduces geography despite being generated only by comparison of words. The landing date of the ancestors of Malagasy is determined about 650 CE. This result is obtained by a straightforward approach based on the comparison of the UPGMA Malagasy family tree with the analogous tree of Romance family of languages for which all dates are well historically attested. We also propose an improved definition of Diversity computed for every locus in Madagascar and not only in places where the dialects were collected. Moreover, Diversity becomes a locally determined quantity as it is usually in biology. Diversity differences point to the South-East coast as the location where the first colonizers landed or, at least, where Malagasy variants started their dispersion. Finally, we find that the dialect spoken by the Mikea, a hunter-gatherer people in the South-West of Madagascar, is not very different from the variants of their neighbours Vezo and Masikoro. Therefore, Mikea unlikely can be linked to eventual aboriginal populations living in Madagascar prior to the main colonization event in 650 CE.


Assuntos
Idioma , Geografia , Humanos , Madagáscar , Filogenia
2.
Phys Rev E ; 94(1-1): 012141, 2016 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-27575110

RESUMO

We investigate front propagation in systems with diffusive and subdiffusive behavior. The scaling behavior of moments of the diffusive problem, both in the standard and in the anomalous cases, is not enough to determine the features of the reactive front. In fact, the shape of the bulk of the probability distribution of the transport process, which determines the diffusive properties, is important just for preasymptotic behavior of front propagation, while the precise shape of the tails of the probability distribution determines asymptotic behavior of front propagation.

3.
Bull Math Biol ; 77(12): 2354-65, 2015 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-26585747

RESUMO

We propose and solve a stochastic mathematical model of general applicability to interbreeding populations which share the same habitat. Resources are limited so that the total population size is fixed by environmental factors. Interbreeding occurs during all the time of coexistence until one of the two population disappears by a random fluctuation. None of the two populations has a selective advantage. We answer the following questions: How long the two populations coexist and how genetically similar they become before the extinction of one of the two? how much the genetic makeup of the surviving population changes by the contribution of the disappearing one? what it is the number of interbreeding events given the observed introgression of genetic material? The model was originally motivated by a paleoanthropological problem concerning the interbreeding of Neanderthals and African modern humans in Middle East which is responsible for the fraction of Neanderthal genes (1-4%) in present Eurasian population.


Assuntos
Genética Populacional , Modelos Genéticos , Animais , Cruzamento , Ecossistema , Extinção Biológica , História Antiga , Humanos , Conceitos Matemáticos , Homem de Neandertal/genética , Processos Estocásticos
4.
Artigo em Inglês | MEDLINE | ID: mdl-25215703

RESUMO

In a recent paper we proposed a non-Markovian random walk model with memory of the maximum distance ever reached from the starting point (home). The behavior of the walker is different from the simple symmetric random walk only when she is at this maximum distance, where, having the choice to move either farther or closer, she decides with different probabilities. If the probability of a forward step is higher than the probability of a backward step, the walker is bold and her behavior turns out to be superdiffusive; otherwise she is timorous and her behavior turns out to be subdiffusive. The scaling behavior varies continuously from subdiffusive (timorous) to superdiffusive (bold) according to a single parameter γ∈R. We investigate here the asymptotic properties of the bold case in the nonballistic region γ∈[0,1/2], a problem which was left partially unsolved previously. The exact results proved in this paper require new probabilistic tools which rely on the construction of appropriate martingales of the random walk and its hitting times.


Assuntos
Modelos Teóricos , Difusão , Movimento (Física)
5.
Bull Math Biol ; 76(3): 654-72, 2014 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-24619806

RESUMO

The compartmentalization of distinct templates in protocells and the exchange of templates between them (migration) are key elements of a modern scenario for prebiotic evolution. Here we use the diffusion approximation of population genetics to study analytically the steady-state properties of such a prebiotic scenario. The coexistence of distinct template types inside a protocell is achieved by a selective pressure at the protocell level (group selection) favoring protocells with a mixed template composition. In the degenerate case, where the templates have the same replication rate, we find that a vanishingly small migration rate suffices to eliminate the segregation effect of random drift and so to promote coexistence. In the nondegenerate case, a small migration rate greatly boosts coexistence as compared with the situation where there is no migration. However, increase of the migration rate beyond a critical value leads to the complete dominance of the more efficient template type (homogeneous regime). In this case, we find a continuous phase transition separating the homogeneous and the coexistence regimes, with the order parameter vanishing linearly with the distance to the transition point.


Assuntos
Células Artificiais , Movimento Celular , Fenômenos Fisiológicos Celulares , Modelos Biológicos , Algoritmos , Células Artificiais/metabolismo , Evolução Biológica , Difusão , Conceitos Matemáticos , Origem da Vida , Biologia de Sistemas
6.
Math Biosci ; 249: 18-26, 2014 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-24472233

RESUMO

Establishing the conditions that guarantee the spreading or the sustenance of altruistic traits in a population is the main goal of intergroup selection models. Of particular interest is the balance of the parameters associated to group size, migration and group survival against the selective advantage of the non-altruistic individuals. Here we use Kimura's diffusion model of intergroup selection to determine those conditions in the case the group survival rate is a nonlinear non-decreasing function of the proportion of altruists in a group. In the case this function is linear, there are two possible steady states which correspond to the non-altruistic and the altruistic phases. At the discontinuous transition line separating these phases there is a non-ergodic coexistence phase. For a continuous concave survival function, we find an ergodic coexistence phase that occupies a finite region of the parameter space in between the altruistic and the non-altruistic phases, and is separated from these phases by continuous transition lines. For a convex survival function, the coexistence phase disappears altogether but a bistable phase appears for which the choice of the initial condition determines whether the evolutionary dynamics leads to the altruistic or the non-altruistic steady state.


Assuntos
Altruísmo , Evolução Biológica , Modelos Biológicos , Migração Animal , Animais , Genética Populacional , Modelos Lineares , Conceitos Matemáticos , Modelos Genéticos , Dinâmica não Linear , Seleção Genética
7.
Artigo em Inglês | MEDLINE | ID: mdl-24329248

RESUMO

We study a one-dimensional random walk with memory. The behavior of the walker is modified with respect to the simple symmetric random walk only when he or she is at the maximum distance ever reached from his or her starting point (home). In this case, having the choice to move farther or to move closer, the walker decides with different probabilities. If the probability of a forward step is higher then the probability of a backward step, the walker is bold, otherwise he or she is timorous. We investigate the asymptotic properties of this bold-timorous random walk, showing that the scaling behavior varies continuously from subdiffusive (timorous) to superdiffusive (bold). The scaling exponents are fully determined with a new mathematical approach based on a decomposition of the dynamics in active journeys (the walker is at the maximum distance) and lazy journeys (the walker is not at the maximum distance).

8.
PLoS One ; 7(10): e47076, 2012.
Artigo em Inglês | MEDLINE | ID: mdl-23112810

RESUMO

Considering the recent experimental discovery of Green et al that present-day non-Africans have 1 to [Formula: see text] of their nuclear DNA of Neanderthal origin, we propose here a model which is able to quantify the genetic interbreeding between two subpopulations with equal fitness, living in the same geographic region. The model consists of a solvable system of deterministic ordinary differential equations containing as a stochastic ingredient a realization of the neutral Wright-Fisher process. By simulating the stochastic part of the model we are able to apply it to the interbreeding of the African ancestors of Eurasians and Middle Eastern Neanderthal subpopulations and estimate the only parameter of the model, which is the number of individuals per generation exchanged between subpopulations. Our results indicate that the amount of Neanderthal DNA in living non-Africans can be explained with maximum probability by the exchange of a single pair of individuals between the subpopulations at each 77 generations, but larger exchange frequencies are also allowed with sizeable probability. The results are compatible with a long coexistence time of 130,000 years, a total interbreeding population of order [Formula: see text] individuals, and with all living humans being descendants of Africans both for mitochondrial DNA and Y chromosome.


Assuntos
DNA/genética , Homem de Neandertal/genética , Animais , População Negra/genética , Simulação por Computador , DNA Mitocondrial/genética , Humanos , Endogamia , Modelos Genéticos , Processos Estocásticos , Cromossomo Y/genética
9.
PLoS One ; 7(2): e30666, 2012.
Artigo em Inglês | MEDLINE | ID: mdl-22363465

RESUMO

The dialects of Madagascar belong to the Greater Barito East group of the Austronesian family and it is widely accepted that the Island was colonized by Indonesian sailors after a maritime trek that probably took place around 650 CE. The language most closely related to Malagasy dialects is Maanyan, but Malay is also strongly related especially for navigation terms. Since the Maanyan Dayaks live along the Barito river in Kalimantan (Borneo) and they do not possess the necessary skill for long maritime navigation, they were probably brought as subordinates by Malay sailors. In a recent paper we compared 23 different Malagasy dialects in order to determine the time and the landing area of the first colonization. In this research we use new data and new methods to confirm that the landing took place on the south-east coast of the Island. Furthermore, we are able to state here that colonization probably consisted of a single founding event rather than multiple settlements. To reach our goal we find out the internal kinship relations among all the 23 Malagasy dialects and we also find out the relations of the 23 dialects to Malay and Maanyan. The method used is an automated version of the lexicostatistic approach. The data from Madagascar were collected by the author at the beginning of 2010 and consist of Swadesh lists of 200 items for 23 dialects covering all areas of the Island. The lists for Maanyan and Malay were obtained from a published dataset integrated with the author's interviews.


Assuntos
Emigração e Imigração , Idioma , Geografia , Humanos , Madagáscar , Filogenia
10.
J R Soc Interface ; 9(66): 54-67, 2012 Jan 07.
Artigo em Inglês | MEDLINE | ID: mdl-21632612

RESUMO

The origin of Malagasy DNA is half African and half Indonesian, nevertheless the Malagasy language, spoken by the entire population, belongs to the Austronesian family. The language most closely related to Malagasy is Maanyan (Greater Barito East group of the Austronesian family), but related languages are also in Sulawesi, Malaysia and Sumatra. For this reason, and because Maanyan is spoken by a population which lives along the Barito river in Kalimantan and which does not possess the necessary skill for long maritime navigation, the ethnic composition of the Indonesian colonizers is still unclear. There is a general consensus that Indonesian sailors reached Madagascar by a maritime trek, but the time, the path and the landing area of the first colonization are all disputed. In this research, we try to answer these problems together with other ones, such as the historical configuration of Malagasy dialects, by types of analysis related to lexicostatistics and glottochronology that draw upon the automated method recently proposed by the authors. The data were collected by the first author at the beginning of 2010 with the invaluable help of Joselinà Soafara Néré and consist of Swadesh lists of 200 items for 23 dialects covering all areas of the island.


Assuntos
Idioma , Classificação , Emigração e Imigração , Geografia , Humanos , Indonésia/etnologia , Madagáscar/etnologia
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