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1.
Microorganisms ; 12(2)2024 Feb 07.
Artigo em Inglês | MEDLINE | ID: mdl-38399749

RESUMO

Listeria monocytogenes is an important foodborne pathogen with worldwide prevalence. Understanding the variability in the potential pathogenicity among strains of different subtypes is crucial for risk assessment. In this study, the growth, survival, and virulence characteristics of 16 L. monocytogenes strains isolated from imported meat in China (2018-2020) were investigated. The maximum specific growth rate (µmax) and lag phase (λ) were evaluated using the time-to-detection (TTD) method and the Baranyi model at different temperatures (25, 30, and 37 °C). Survival characteristics were determined by D-values and population reduction after exposure to heat (60, 62.5, and 65 °C) and acid (HCl, pH = 2.5, 3.5, and 4.5). The potential virulence was evaluated via adhesion and invasion to Caco-2 cells, motility, and lethality to Galleria mellonella. The potential pathogenicity was compared among strains of different lineages and subtypes. The results indicate that the lineage I strains exhibited a higher growth rate than the lineage II strains at three growth temperatures, particularly serotype 4b within lineage I. At all temperatures tested, serotypes 1/2a and 1/2b consistently demonstrated higher heat resistance than the other subtypes. No significant differences in the log reduction were observed between the lineage I and lineage II strains at pH 2.5, 3.5, and 4.5. However, the serotype 1/2c strains exhibited significantly low acid resistance at pH 2.5. In terms of virulence, the lineage I strains outperformed the lineage II strains. The invasion rate to Caco-2 cells and lethality to G. mellonella exhibited by the serotype 4b strains were higher than those observed in the other serotypes. This study provides meaningful insights into the growth, survival, and virulence of L. monocytogenes, offering valuable information for understanding the correlation between the pathogenicity and subtypes of L. monocytogenes.

2.
J AOAC Int ; 106(5): 1246-1253, 2023 Sep 01.
Artigo em Inglês | MEDLINE | ID: mdl-37252814

RESUMO

BACKGROUND: Shiga toxin-producing Escherichia coli (STEC) is a significant cause of foodborne illness causing various gastrointestinal diseases including hemolytic uremic syndrome (HUS), the most severe form, which can lead to kidney failure or even death. OBJECTIVE: Here, we report the development of recombinase aided amplification (RAA)-exo-probe assays targeting the stx1 and stx2 genes for the rapid detection of STEC in food samples. METHODS: Primers and exo-probes were designed and optimized for the detection of stx1 and stx2 using RAA technology. The optimal STEC RAA-exo-probe assays were then tested for specificity and sensitivity, and validated in both spiked and real food samples. RESULTS: These assays were found to be 100% specific to STEC strains and were also highly sensitive with a detection limit of 1.6 × 103 CFU/mL or 32 copies/reaction. Importantly, the assays were able to successfully detect STEC in spiked and real food samples (beef, mutton, and pork), with a detection limit as low as 0.35 CFU/25g in beef samples after an overnight enrichment step. CONCLUSIONS: Overall, the RAA assay reactions completed within ∼20 min and were less dependent on expensive equipment, suggesting they can be easily adopted for in-field testing requiring only a fluorescent reader. HIGHLIGHTS: As such, we have developed two rapid, sensitive, and specific assays that can be used for the routine monitoring of STEC contamination in food samples, particularly in the field or in poorly equipped labs.


Assuntos
Infecções por Escherichia coli , Escherichia coli Shiga Toxigênica , Animais , Bovinos , Escherichia coli Shiga Toxigênica/genética , Toxina Shiga I/genética , Toxina Shiga II/genética , Recombinases , Microbiologia de Alimentos
3.
Int J Food Microbiol ; 382: 109916, 2022 Dec 02.
Artigo em Inglês | MEDLINE | ID: mdl-36126498

RESUMO

A total of 1797 imported food samples collected during 2018 to 2020 were investigated for Listeria monocytogenes. Antibiotic susceptibility tests and whole genome sequencing analysis were performed for the obtained isolates. The overall prevalence of L. monocytogenes was 5.62 %; the highest prevalence was observed for pork (13.65 %), followed by fish (6.25 %), sheep casing (6.06 %), chicken (3.61 %), and beef (2.06 %). Geographical differences in prevalence were also observed for pork. Resistance to oxacillin (39.33 %) and clindamycin (16.85 %) was common, whereas resistance rates for other antibiotics were relatively low, ranging from 0 % to 6.74 %. Pork and fish isolates showed resistance to more antibiotics than beef isolates. Tetracycline and chloramphenicol resistance phenotypes strongly correlated with genotypes. The predominant serogroup was 1/2a, 3a, at 44.44 %, while the percentages of three other serogroups were similar and relatively lower, from 17.28 % to 19.75 %. Significant genetic differences were observed among lineage I and II isolates. LIPI-3 was carried by 19.75 % (16/81) of isolates and LIPI-4 by 6.17 % (5/81); all were lineage I. The stress survival island was present in 31.03 % (9/29) of lineage I and 83.02 % (44/53) of lineage II. Benzalkonium chloride tolerance genes were carried by 10.34 % (3/29) of lineage I and 23.08 % (12/52) of lineage II isolates. A total of 25 sequence types (STs) were identified, among which one was novel; ST9 and ST121 were the most prevalent. Disparate distribution of STs among food types was observed, and geographical and food related characteristics were also found for some STs. Hypervirulent STs, such as ST1, ST4 and ST6, belonged to 4b,4e,4e; carried LIPI-3 and/or LIPI-4; and some even were ECI or ECII; while only one carried SSI or BC tolerance genes. In contrast, hypo-virulent STs such as ST9 and ST121 carried SSI and BC tolerance genes, while none had LIPI-3/LIPI-4. Certain STs were detected frequently from a particular food of a particular country for a long time, indicating more attention should be given to these special persistent isolates. These findings are valuable for source tracking, prevention and control of L. monocytogenes in the global food chain.


Assuntos
Listeria monocytogenes , Listeriose , Animais , Antibacterianos/farmacologia , Compostos de Benzalcônio , Bovinos , China/epidemiologia , Clindamicina , Resistência Microbiana a Medicamentos , Microbiologia de Alimentos , Listeriose/epidemiologia , Epidemiologia Molecular , Oxacilina , Prevalência , Ovinos/genética , Tetraciclinas
4.
J AOAC Int ; 106(1): 156-164, 2022 Dec 22.
Artigo em Inglês | MEDLINE | ID: mdl-36005831

RESUMO

BACKGROUND: Escherichia coli O157:H7, being the cause of hemorrhagic colitis in humans, is recognized as one of the most dangerous and widespread foodborne pathogens. A highly specific, sensitive, and rapid E. coli O157:H7 detection method needs to be developed since the traditional detection methods are complex, costly, and time-consuming. OBJECTIVE: In this study, a recombinase aided amplification (RAA) assisted CRISPR/Cas12a (RAA-CRISPR/Cas12a) fluorescence platform for specific, sensitive, and rapid nucleic acid detection of E. coli O157:H7 was introduced. METHODS: First, the feasibility (components of CRISPR/Cas12a system) of the developed method was evaluated. Then a total of 34 bacterial strains were used for the specificity test, and gradient dilutions of extracted DNA and bacterial solutions of E. coli O157:H7 were prepared for the sensitivity test. Third, a real-time PCR assay for detection of the specific wzy gene of E. coli O157:H7 (FDA's Bacteriological Analytical Manual) was used for sensitivity comparison. Finally, analysis of RAA-CRISPR/Cas12a detection in spiked and 93 real ground beef samples was carried out. RESULTS: The developed RAA-CRISPR/Cas12a method showed high specificity, and the detection could be completed within 30 min (after 4 h enrichment in spiked ground beef samples). The limit of detection (LOD) of bacterial concentrations and genomic DNA was 5.4 × 102 CFU/mL and 7.5 × 10-4 ng/µL, respectively, which exhibited higher sensitivity than the RAA-gel electrophoresis and RT-PCR methods. Furthermore, it was shown that E. coli O157:H7 in ground beef samples could be positively detected after 4 h enrichment when the initial bacterial inoculum was 9.0 CFU/25 g. The detection results of the RAA-CRISPR/Cas12a method were 100% consistent with those of the RT-PCR and traditional culture-based methods while screening the E. coli O157:H7 from 93 local collected ground beef samples. CONCLUSIONS: The developed RAA-CRISPR/Cas12a method showed high specificity, high sensitivity, and rapid positive detection of E. coli O157:H7 from ground beef samples. HIGHLIGHTS: The RAA-CRISPR/Cas12a system proposed in this study provided an alternative molecular tool for quick, specific, sensitive, and accurate detection of E. coli O157:H7 in foods.


Assuntos
Escherichia coli O157 , Animais , Bovinos , Humanos , Escherichia coli O157/genética , Microbiologia de Alimentos , Sistemas CRISPR-Cas/genética , Reação em Cadeia da Polimerase em Tempo Real/métodos , Limite de Detecção , Sensibilidade e Especificidade
5.
J Agric Food Chem ; 70(30): 9557-9566, 2022 Aug 03.
Artigo em Inglês | MEDLINE | ID: mdl-35857318

RESUMO

Campylobacter jejuni is the major cause of campylobacteriosis, one of the most common foodborne illnesses worldwide. Here, we report the development of RAA-exo-probe and RAA-CRIPSR/Cas12a assays for the detection of C. jejuni in food samples. The two assays were found to be highly specific to C. jejuni and highly sensitive, as they were one log more sensitive compared to the traditional culture method, with detection thresholds of 9 and 5 copies per reaction, respectively. These assays successfully detected C. jejuni in spiked chicken samples and natural meat samples (chicken, beef, mutton, etc.) and were overall less dependent on expensive equipment, only requiring a fluorescent reader. Their ease of use compared to other nucleic acid amplification-based methods indicates that these assays could be adapted for the rapid, routine surveillance of C. jejuni contamination in food samples, particularly for work done in the field or poorly equipped labs.


Assuntos
Campylobacter jejuni , Análise de Alimentos , Animais , Sistemas CRISPR-Cas , Campylobacter jejuni/genética , Bovinos , Galinhas , Técnicas de Amplificação de Ácido Nucleico/métodos , Recombinases/genética
6.
Toxins (Basel) ; 14(2)2022 01 19.
Artigo em Inglês | MEDLINE | ID: mdl-35202096

RESUMO

Shiga toxin-producing Escherichia coli (STEC) and enteropathogenic Escherichia coli (EPEC) are foodborne pathogens that cause hemolytic uremic syndrome and fatal infant diarrhea, respectively, but the characterization of these bacteria from imported food in China are unknown. A total of 1577 food samples from various countries during 2015-2021 were screened for STEC and EPEC, and the obtained isolates were tested for antimicrobial resistance and whole genome sequencing analysis was performed. The prevalence of STEC and EPEC was 1.01% (16/1577) and 0.51% (8/1577), respectively. Antimicrobial resistances to tetracycline (8%), chloramphenicol (8%), ampicillin (4%), ceftazidime (4%), cefotaxime (4%), and trimethoprim-sulfamethoxazole (4%) were observed. The antimicrobial resistance phenotypes corresponded with genotypes for most strains, and some resistance genes were related to mobile genetic elements. All 16 STEC isolates were eae negative, two solely contained stx1 (stx1a or stx1c), 12 merely carried stx2 (stx2a, stx2d, or stx2e), and two had both stx1 and stx2 (stx1c + stx2b, stx1a + stx2a + stx2c). Although they were eae negative, several STEC isolates carried other adherence factors, such as iha (5/16), sab (1/16), and lpfA (8/16), and belonged to serotypes (O130:H11, O8:H19, and O100:H30) or STs (ST297, ST360), which have caused human infections. All the eight EPEC isolates were atypical EPEC; six serotypes and seven STs were found, and clinically relevant EPEC serotypes O26:H11, O103:H2, and O145:H28 were identified. Two STEC/ETEC (enterotoxigenic E. coli) hybrids and one EPEC/ETEC hybrid were observed, since they harbored sta1 and/or stb. The results revealed that food can act as a reservoir of STEC/EPEC with pathogenic potential, and had the potential ability to transfer antibiotic resistance and virulence genes.


Assuntos
Comércio , Farmacorresistência Bacteriana , Escherichia coli Enteropatogênica/efeitos dos fármacos , Genoma Bacteriano , Escherichia coli Shiga Toxigênica/efeitos dos fármacos , Sequenciamento Completo do Genoma , Anti-Infecciosos/farmacologia , China , Escherichia coli Enteropatogênica/genética , Microbiologia de Alimentos , Humanos , Sorogrupo , Escherichia coli Shiga Toxigênica/genética
7.
J AOAC Int ; 102(3): 842-854, 2019 May 01.
Artigo em Inglês | MEDLINE | ID: mdl-30454080

RESUMO

Background: The gene-based real-time PCR method for identification of Campylobacter jejuni is more simple, rapid and accurate than the traditional biochemical method. Objective: A performance validation of the TadpoleTMCampylobacter jejuni Real-Time PCR Identification Kit was performed. Method: The assay uses TaqMan Real-time PCR technology to amplify target genes from isolated colonies. Bacterial deoxyribonucleic acid (DNA) from inclusivity and exclusivity organisms cultured on Columbia Blood Agar, Campy-Cefex agar and modified Charcoal Cefoperazone Deoxycholate was extracted and analyzed on three instruments: Applied Biosystems (ABI) 7500 Fast, ABI StepOne Plus and Bio-Rad CFX96. Results: When 57 distinct strains of C. jejuni were tested for inclusivity, all 57 strains produced positive results on the three instruments. In exclusivity testing, all 35 strains of related organisms, including 7 non-target Campylobacter strains and other common species, produced negative results on the three instruments. The Independent Laboratory validation consisting of an inclusivity and exclusivity evaluation for 10 C. jejuni isolates and 10 nontarget Campylobacter isolates also showed 100% expected results on the three instruments. In addition, in robustness testing, small, deliberate changes to the assay parameters, including cell suspension turbidity, heat lysis time, and DNA template volume in the PCR reaction, did not affect the kit performance. Finally, the combined lot-to-lot and stability study on both the ABI 7500 Fast and the ABI StepOne Plus showed that the 11 C. jejuni strains and 5 nontarget Campylobacter strains can be correctly identified by the three independently manufactured, lots and it supported a shelf life of 9 months when stored at -20°C. Conclusions: The Tadpole method offers a rapid, accurate, and robust alternative for C. jejuni identification. Highlights: Rapid and accurate method to identify C. jejuni, which has a good robustness and high stability. It is flexible and offers the advantages of reduced labor and time saving.


Assuntos
Campylobacter jejuni/isolamento & purificação , DNA Bacteriano/análise , Microbiologia de Alimentos/métodos , Reação em Cadeia da Polimerase em Tempo Real/métodos , Animais , Campylobacter jejuni/genética , Bovinos , Fezes/microbiologia , Fluoresceínas/química , Fluorescência , Corantes Fluorescentes/química , Humanos , Lactente , Fórmulas Infantis/microbiologia , Mamíferos , Aves Domésticas , Carne Vermelha/microbiologia
8.
Foodborne Pathog Dis ; 14(12): 728-734, 2017 12.
Artigo em Inglês | MEDLINE | ID: mdl-28926285

RESUMO

The involvement of AcrAB-TolC efflux pump in regulating fluoroquinolone resistance of naturally occurring Salmonella isolates is insufficiently investigated. In this study, the regulatory genes, acrR, ramR, marRAB, and soxRS of AcrAB-TolC efflux pump, of 27 naturally occurring fluoroquinolone-resistant Salmonella isolates collected in China were sequenced. The expression levels of acrB, ramA, marA, and soxS were also examined using quantitative real-time polymerase chain reaction. Gene alterations were mainly observed for acrR (three mutation types) and ramR (four mutation types), not for marRAB (no mutation) or soxRS (one mutaton type). Overexpressions were also mainly observed for acrB and ramA, not for marA or soxS. Some mutations/deletions in ramR caused highly elevated expression of ramA. Complementation with wild-type ramR gene reduced mRNA levels of acrB and ramA by 1.7- to 2.2-fold and 10.5- to 30.1-fold, respectively, and lowered fluoroquinolones (FQ) minimum inhibitory concentrations by 2- to 8-fold. Neither MarA nor SoxS was found to be associated with increased FQ resistance. This study shows that the AcrAB efflux pump is playing a role in mediating fluoroquinolone resistance, and RamA may be the major global regulator of AcrAB-TolC-mediated fluoroquinolone resistance in Salmonella.


Assuntos
Proteínas de Bactérias/genética , Farmacorresistência Bacteriana Múltipla/genética , Fluoroquinolonas/farmacologia , Salmonella/genética , Antibacterianos/farmacologia , Proteínas de Bactérias/metabolismo , China , DNA Bacteriano/genética , Teste de Complementação Genética , Testes de Sensibilidade Microbiana , Reação em Cadeia da Polimerase em Tempo Real , Salmonella/classificação , Salmonella/efeitos dos fármacos , Análise de Sequência de DNA
9.
Food Microbiol ; 50: 20-7, 2015 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-25998811

RESUMO

A total of 359 non-O157 STEC isolates from food, humans and animals were examined for serotypes, Shiga toxin subtypes and intimin subtypes. Isolates solely harboring stx2 from the three sources were selected for Vero cell cytotoxicity test. stx subtypes in eae negative isolates were more diverse than in eae positive isolates primarily carrying stx2a. Four eae subtypes (eaeß,eaeε1,eaeγ1 and eaeγ2/θ) were observed and correlated with serotypes and flagella. Food isolates showed more diverse serotypes, virulence factors and cell cytotoxicities than human isolates. Some isolates from produce belonged to serotypes that have been implicated in human diseases, carried stx2a or/and stx2dact and exhibited high cell cytotoxicity similar to human isolates. This indicates that foods can be contaminated with potentially pathogenic STEC isolates that may cause human diseases. Given the increased produce consumption and growing burden of foodborne outbreaks due to produce, produce safety should be given great importance.


Assuntos
Microbiologia de Alimentos , Toxina Shiga/classificação , Toxina Shiga/genética , Escherichia coli Shiga Toxigênica/isolamento & purificação , Escherichia coli Shiga Toxigênica/patogenicidade , Adesinas Bacterianas/classificação , Adesinas Bacterianas/genética , Animais , Chlorocebus aethiops , Proteínas de Escherichia coli/classificação , Proteínas de Escherichia coli/genética , Flagelos , Inocuidade dos Alimentos , Frutas/microbiologia , Genótipo , Humanos , Carne/microbiologia , Sorotipagem , Verduras/microbiologia , Células Vero , Virulência
10.
Foodborne Pathog Dis ; 11(5): 342-5, 2014 May.
Artigo em Inglês | MEDLINE | ID: mdl-24694187

RESUMO

Non-O157 Shiga toxin-producing Escherichia coli (STEC) are increasingly recognized as foodborne pathogens worldwide. Serogroups O26, O111, and O103 cause most known outbreaks related to non-O157 STEC. Pathogenicity islands (PAIs) play a major role in the evolution of STEC pathogenicity. To determine the distribution of PAIs often associated with highly virulent STECs (OI-122, OI-43/48, OI-57, and high pathogenicity islands) among STEC O26, O103, and O111, a collection of STEC O26 (n=45), O103 (n=29), and O111 (n=52) from humans and animals were included in this study. Pulsed-field gel electrophoresis (PFGE) with XbaI digestion was used to characterize the clonal relationship of the strains. In addition, a polymerase chain reaction-restriction fragment length polymorphism assay was used to determine eae subtypes. Additional virulence genes on PAIs were identified using specific PCR assays, including OI-122: pagC, sen, efa-1, efa-2, and nleB; OI-43/48: terC, ureC, iha, and aidA-1; OI-57: nleG2-3, nleG5-2, and nleG6-2; and HPI: fyuA and irp2. A PFGE dendrogram demonstrated that instead of clustering together with strains from the same O type (O111:H8), the O111:H11 (n=14) strains clustered together with strains of the same H type (O26:H11, n=45). In addition, O26:H11 and O111:H11 strains carried eae subtype ß, whereas O111:H8 strains had eae γ2/θ. The O26:H11 and O111:H11 stains contained an incomplete OI-122 lacking pagC and a complete HPI. However, a complete OI-122 but no HPI was found in the O111:H8 strains. Additionally, aidA-1 of OI-43/48 and nleG6-2 of OI-57 were significantly associated with O26:H11 and O111:H11 strains but were almost missing in O111:H8 strains (p<0.001). This study demonstrated that H11 (O111:H11 and O26:H11) strains were closely related and may have come from the same ancestor.


Assuntos
Ilhas Genômicas , Escherichia coli Shiga Toxigênica/classificação , Adesinas Bacterianas/genética , Adesinas de Escherichia coli/genética , Animais , Técnicas de Tipagem Bacteriana , Eletroforese em Gel de Campo Pulsado , Proteínas de Escherichia coli/genética , Doenças Transmitidas por Alimentos/microbiologia , Humanos , Reação em Cadeia da Polimerase , Polimorfismo de Fragmento de Restrição , Toxina Shiga/genética , Escherichia coli Shiga Toxigênica/genética , Escherichia coli Shiga Toxigênica/isolamento & purificação , Fatores de Virulência/genética
11.
Foodborne Pathog Dis ; 10(8): 737-43, 2013 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-23767822

RESUMO

A polymerase chain reaction (PCR)-mass spectroscopy assay was developed to identify non-O157 Shiga toxin-producing Escherichia coli (STEC) with Plex-ID biosensor system, a platform identifying short PCR amplicons by specific base compositions. This assay simultaneously amplifies five fragments of two housekeeping genes, two subunits of stx2 gene, and four other virulence genes of STEC. A total of 164 well-characterized STEC isolates were examined with the assay to build a DNA base composition database. Another panel of 108 diverse STEC isolates was tested with the established database to evaluate the assay's identification capability. Among the 108 isolates, the assay specificity was 100% for three (stx1, eae, and aggA) out of five tested virulence genes, but 99% for stx2 and 96% for hlyA, respectively. Main stx1/stx2 subtypes and multiple alleles of stx1/stx2 could be differentiated. The assay successfully identified several clinically significant serotypes, including O91:H14, O103:H25, O145:H28/NM, O113:H21, and O104:H4. Meanwhile, it was able to group isolates with different levels of pathogenic potential. The results suggest that this high-throughput method may be useful in clinical and regulatory laboratories for STEC identification, particularly strains with increased pathogenic potential.


Assuntos
Reação em Cadeia da Polimerase/métodos , Escherichia coli Shiga Toxigênica/classificação , Escherichia coli Shiga Toxigênica/isolamento & purificação , Espectrometria de Massas por Ionização por Electrospray/métodos , Adesinas Bacterianas/genética , Animais , DNA Bacteriano/genética , Escherichia coli O157 , Proteínas de Escherichia coli/genética , Proteínas de Fímbrias/genética , Contaminação de Alimentos/análise , Microbiologia de Alimentos , Humanos , Sorotipagem , Toxina Shiga I/genética , Toxina Shiga II/genética , Escherichia coli Shiga Toxigênica/genética , Fatores de Virulência/genética
12.
Food Microbiol ; 35(1): 58-64, 2013 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-23628615

RESUMO

A total of 67 Listeria monocytogenes isolates from 698 raw meat samples were characterized for molecular serogroup identification and antimicrobial susceptibility. Approximately one third (32.8%) of the isolates belonged to molecular serogroup 1/2a, 3a, followed by 1/2c, 3c (26.9%), 1/2b, 3b, 7 (22.4%), 4b, 4d, 4e (16.4%) and 4a, 4c (1.5%). Most of the L. monocytogenes isolates were susceptible to 14 antimicrobials tested but several were resistant to tetracycline, ciprofloxacin and nitrofurantoin. An additional 30 L. monocytogenes isolates from chicken and produce in our collection were also included to determine the presence of significant virulence markers. All 97 isolates carried inlC and inlJ except for a lineage III isolate 110-1. Most Listeriolysin S (LLS)-carrying isolates (11/12) belonged to lineage I, whereas the remaining one isolate belonged to lineage III. Five 4b, 4d, 4e isolates including two from turkey and three from produce belonged to Epidemic Clone I (ECI). Four molecular serogroup associated mutation types that lead to premature stop codons (PMSCs) in inlA were identified. PFGE and inlA sequence analysis results were concordant, and different virulence potential within 1/2a, 3a and 4b, 4d, 4e isolates were observed. The study revealed that a subset of isolates from meat and produce belonged to ECI, harbored inlC, inlJ and LLS, and produced full length InlA, suggesting that they be capable of causing human illness.


Assuntos
Técnicas de Tipagem Bacteriana/métodos , Listeria monocytogenes/isolamento & purificação , Carne/microbiologia , Animais , Proteínas de Bactérias/genética , Toxinas Bacterianas/genética , Ciprofloxacina/farmacologia , Clonagem Molecular , Farmacorresistência Bacteriana , Eletroforese em Gel de Campo Pulsado , Contaminação de Alimentos/análise , Microbiologia de Alimentos , Proteínas de Choque Térmico/genética , Proteínas Hemolisinas/genética , Listeria monocytogenes/classificação , Listeria monocytogenes/efeitos dos fármacos , Listeria monocytogenes/patogenicidade , Testes de Sensibilidade Microbiana , Nitrofurantoína/farmacologia , Filogenia , Sorotipagem , Tetraciclina/farmacologia , Virulência
13.
Appl Environ Microbiol ; 79(11): 3406-12, 2013 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-23524679

RESUMO

Pathogenicity islands (PAIs) play an important role in Shiga toxin-producing Escherichia coli (STEC) pathogenicity. The distribution of PAIs OI-122, OI-43/48, and OI-57 and a high-pathogenicity island (HPI) were determined among 98 STEC strains assigned to seropathotypes (SPTs) A to E. PCR and PCR-restriction fragment length polymorphism assays were used to identify 14 virulence genes that belonged to the four PAIs and to subtype eae and stx genes, respectively. Phylogenetic trees were constructed based on the sequences of pagC among 34 STEC strains and iha among 67 diverse pathogenic E. coli, respectively. Statistical analysis demonstrated that the prevalences of OI-122 (55.82%) and OI-57 (82.35%) were significantly greater in SPTs (i.e., SPTs A, B, and C) that are frequently associated with severe disease than in other SPTs. terC (62.5%) and ureC (62.5%) in OI-43/48 were also significantly more prevalent in SPTs A, B, and C than in SPTs D and E. In addition, OI-122, OI-57, and OI-43/48 and their associated virulence genes (except iha) were found to be primarily associated with eae-positive STEC, whereas HPI occurred independently of the eae presence. The strong association of OI-122, OI-43/48, and OI-57 with eae-positive STEC suggests in part that different pathogenic mechanisms exist between eae-positive and eae-negative STEC strains. Virulence genes in PAIs that are associated with severe diseases can be used as potential markers to aid in identifying highly virulent STEC.


Assuntos
Marcadores Genéticos/genética , Ilhas Genômicas/genética , Filogenia , Escherichia coli Shiga Toxigênica/patogenicidade , Reação em Cadeia da Polimerase , Polimorfismo de Fragmento de Restrição , Sorotipagem , Especificidade da Espécie
14.
Food Microbiol ; 32(2): 371-7, 2012 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-22986203

RESUMO

The prevalence and characteristics of non-O157 Shiga toxin-producing Escherichia coli (STEC) in retail ground meat from the Washington D.C. area were investigated in this study. STEC from 480 ground beef and pork samples were identified using PCR screening followed by colony hybridization. The STEC isolates were serogrouped and examined for the presence of virulence genes (stx1, stx2, eae and hlyA), and antimicrobial susceptibility. PFGE was used to identify the clonal relationships of STEC isolates, and PCR-RFLP was employed to determine stx subtypes. In addition, the cytotoxicity of STEC isolates was determined using a Vero cell assay. STEC were identified in 12 (5.2%) of 231 ground pork and 13 (5.2%) of 249 ground beef samples. Among 32 STEC isolates recovered from the 25 samples, 12 (37.5%) carried stx2dact and 7 (21.9%) carried hlyA, but none carried eae. Nine isolates were identified as O91, and 17 (53.1%) isolates were resistant to two or more antimicrobials. Verotoxicity was detected in 26 (81.3%) of the STEC isolates. Thus, the retail ground meat was contaminated with a heterogeneous population of non-O157 STEC, some of which were potential human pathogens.


Assuntos
Contaminação de Alimentos/análise , Carne/microbiologia , Escherichia coli Shiga Toxigênica/isolamento & purificação , Animais , Antibacterianos/farmacologia , Bovinos , Qualidade de Produtos para o Consumidor , District of Columbia , Farmacorresistência Bacteriana , Toxinas Shiga/metabolismo , Escherichia coli Shiga Toxigênica/efeitos dos fármacos , Escherichia coli Shiga Toxigênica/genética , Escherichia coli Shiga Toxigênica/metabolismo , Suínos
15.
Wei Sheng Wu Xue Bao ; 50(6): 788-96, 2010 Jun.
Artigo em Chinês | MEDLINE | ID: mdl-20687345

RESUMO

OBJECTIVE: Salmonella isolates from retail food were examined for antimicrobial susceptibility and further characterized to better understand the development and dissemination of antimicrobial resistance among foodborne Salmonella in China. METHODS: Antimicrobial susceptibility of 359 Salmonella isolates was determined by using agar dilution methods recommended by the Clinical and Laboratory Standards Institute. Antimicrobial resistance integrons and resistance genes were identified using PCR. Mutations in gyrase and Topoisomerase genes related to fluoroquinolones resistance were also determined using PCR and gene sequencing analysis. RESULTS: Among the 359 Salmonellae isolates, 67% were resistant to Sulfamethoxazole, followed by resistant to trimethoprim/Sulfamethoxazole (58%), tetracycline (56%), kanamycin (37%), nalidixic acid (35%), ampicillin (33%), amoxicillin/clavulanic acid (32%), streptomycin (29%), chloramphenicol and gentamicin (26%), ciprofloxacin (21%), ceftriaxone (16%), cefoxitin (9%) and cefoperazone (8%). Among the 284 resistant isolates, 79% were resistant to at least one antimicrobial, 25.9% to 10 or more than 10 antimicrobials, and 2.5% to 14 antibiotic agents. Integrons were detected in some of sulfamethoxazole-ressitant Salmonella, and the most common integron was 1.4 kb, Antimicrobial resistance genes carried by integrons included aadA1, aadA2, aadA5, tetR, blaPSE1, blaDHA1, blaVEB-1, dhfr I, dhfr V, dhfrVl and dhfr17. The blaTEM gene was also detected in 51.6% of 62 ceftriaxone and/or cefoperazone resistant isolates, and blacMY-2 was detected in 56.5% of the isolates. 13.6% of the Salmonella isolates carried Salmonella Gene Island. Sixty-eight point mutations were detected in gyrA, parC and parE of 35 fluoroquinolone-resistant Salmonella isolates. The common mutations in gyrA gene were Ser83Phe, Ser83Tyr, Asp87Gly and Asp87Asn, whereas ser80Arg was detected in parC. Mutations including Lys441 Ile, Lys428Gln, Asp494Asn, Lys428Gln and Gly442Ser were detected in parE, which was first reported in Salmonella. CONCLUSION: Antimicrobial resistance of Salmonella recovered from food in Shaanxi province was common. Several genetic elements including integron, Salmonella Gene Island, beta-lactamase genes and mutations in gyrase and topoisomerase genes played an important role in antimicrobial resistance of Salmonella.


Assuntos
Proteínas de Bactérias/genética , Farmacorresistência Bacteriana Múltipla , Carne/microbiologia , Salmonella/efeitos dos fármacos , Salmonella/genética , Animais , Antibacterianos/farmacologia , Proteínas de Bactérias/metabolismo , Bovinos , Galinhas , China , Contaminação de Alimentos/análise , Testes de Sensibilidade Microbiana , Salmonella/isolamento & purificação , Infecções por Salmonella , Ovinos , Suínos
16.
Int J Food Microbiol ; 141(1-2): 63-72, 2010 Jun 30.
Artigo em Inglês | MEDLINE | ID: mdl-20493570

RESUMO

A total of 764 retail meat including 515 chicken, 91 pork, 78 beef and 80 lamb samples were collected in Shaanxi Province of China in 2007-2008 to determine the prevalence of Salmonella. The isolates were characterized using serotyping, antimicrobial susceptibility testing, and the presence of bla(CMY-2) and bla(TEM) and class I integrons. Selective serovars were further subtyped using PFGE. Approximately 54% (276) of chicken, 31% (28) of pork, 17% (13) of beef and 20% (16) of lamb samples were positive of Salmonella. Among 24 serovars identified, Enteritidis (31.5%) was most common, followed by Typhimurium (13.4%), Shubra (10.0%), Indiana (9.7%), Derby (9.5%) and Djugu (7.0%). Nearly 80% of the isolates (283) were resistant to at least one antimicrobial, and 53% (191) to more than three antimicrobials. Resistance was most frequently observed to sulfamethoxazole (67%), to trimethoprim/sulfamethoxazole (58%) and to tetracycline (56%). Furthermore, many isolates were resistant to nalidixic acid (35%), ciprofloxacin (21%) and ceftriaxone (16%). Most isolates of Shubra (89%) and Indiana (88%) were resistant to > or = 9 antimicrobials, compared to only 11% of Enteritidis and 9% of Infantis that showed similar resistance. Class I integrons were detected in 10% of the isolates, and contained aadA, tetR, dhfr, bla(PSE-1), bla(DHA-1) and bla(VEB-1) gene cassettes alone or various combinations. Ceftriaxone- and/or cefoperazone-resistant isolates (n=62) carried bla(TEM) (51.6%) and/or bla(CMY-2) (56.5%). A total of 116 PFGE patterns were generated among 210 selected isolates. Our findings indicated that Salmonella contamination was common in retail meats, and that the Salmonella isolates were phenotypically and genetically diverse. Additionally, many Salmonella isolates were resistant to multiple antimicrobials.


Assuntos
Farmacorresistência Bacteriana Múltipla , Microbiologia de Alimentos , Carne/microbiologia , Salmonella/isolamento & purificação , Animais , Antibacterianos , Sequência de Bases , Bovinos , Galinhas , China , Comércio , Eletroforese em Gel de Campo Pulsado/métodos , Integrons , Prevalência , Salmonella/classificação , Salmonella/genética , Sorotipagem/métodos , Ovinos , Suínos , beta-Lactamases/genética
17.
Zhonghua Yu Fang Yi Xue Za Zhi ; 42(10): 758-61, 2008 Oct.
Artigo em Chinês | MEDLINE | ID: mdl-19178840

RESUMO

OBJECTIVE: Salmonella isolates recovered from retail meats that were collected in supermarkets and free markets in Xi'an and Yangling areas of Shaanxi province were studied to determine antibiotic susceptibility. METHOD: Antimicrobial susceptibility to 14 antibiotics of 193 salmonella isolates were determined by using agar dilution method, which was recommended by National Committee of Clinical Laboratory Standard (NCCLS), and E.coli ATCC25922 and E.faecalis ATCC29212 as standard control strains. RESULTS: The 44.6% of the salmonella isolates were resistant to sulfamethoxazole, followed by resistance to kanamycin (40.9%), tetracycline (37.8%), amoxicillin (26.9%), ampicillin (25.4%), gentamicin (23.3%) and chloramphenicol (21.8%). Some isolates also showed resistance to fluoroquinolones, the rates for ciprofloxacin, enrofloxacin, levofloxacin and gatifloxacin were 22.3%, 21.8%, 20.8% and 21.2%, respectively. 55 isolates (28.5%) were multidrug resistant (MDR) strains, 28 of 193 isolates (14.5%) could resist at least 13 antibiotics, 24 isolates (12.4%) were resistant to from 4 to 12 antibiotics. CONCLUSION: Salmonella isolates recovered from retail meats in Xi'an district of Shaanxi province were seriously resistant to antimicrobials commonly used as human and veterinary medicine.


Assuntos
Farmacorresistência Bacteriana Múltipla , Produtos da Carne/microbiologia , Salmonella/efeitos dos fármacos , Salmonella/isolamento & purificação , Animais , Bovinos , Galinhas , Microbiologia de Alimentos , Cabras , Ovinos , Suínos
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