Mitochondrion genomes of seven species of the endangered genus Sporophila (Passeriformes: Thraupidae).

We announce the mitochondrial genomes of seven species of the genus Sporophila (S. bouvreuil, S. iberaensis, S. melanogaster, S. minuta, S. nigrorufa, S. pileata, and S. ruficollis) which were validated by comparative genomic and phylogenetic analysis with related species. The mitochondrial genomes of seven passerines of the genus Sporophila were assembled (three complete and four nearly complete genomes) and were validated by reconstructing phylogenetic relations within Thraupidae. The complete mitogenomes ranged from 16,781 bp in S. ruficollis to 16,791 bp in S. minuta. We identified a conserved genome composition within all mitogenomes with 13 protein-coding genes, 22 tRNAs and two rRNAs. We observed a bias in the nucleotide composition and six mutational hotspots in Sporophila mitogenomes. Our mitogenome-based phylogenetic tree has S. minuta, S. maximiliani and S. nigricollis as sister species of the remaining species in the genus. We present new mitogenome sequences for seven Sporophila species, providing new genomic resources that may be useful for research on the evolution, comparative genetics, and conservation of this threatened group.

Tree Species and Morphology of Holes Caused by Black-Tufted Marmosets to Obtain Exudates: Some Implications for the Exudativory.

Knowledge of the pattern of exploitation of trees can help us understand the relationship between marmosets and plants, especially in declining forests, such as those in the Brazilian Cerrado. Black-tufted marmosets (Callithrix penicillata) regularly exploit exudates by gouging the bark of trees with their specialized teeth. Determining preferred tree species to exploit exudates is important for forest management aimed at maintaining an essential food source for urban marmosets. We characterized the tree species, dendrometry, and the characteristics of the holes made by marmosets to obtain exudates. Based on these data, we proposed a gouging effort index (Chiseling Suitability Index for Marmosets, ChiSI). We identified 16 species belonging to 10 families of trees with gouging marks made by marmosets. Eleven new tree species used by black-tufted marmosets for exudates were identified in urban forests in the Cerrado. Exudate exploration was predominantly of medium intensity, with round holes concentrated in the canopy. The species Tapirira guianensis and Croton urucarana were preferred. The ChiSI was characterized by a narrow range for both T. guianensis and C. urucarana. Despite the flexibility of obtaining exudates, the black-tufted marmosets concentrate their exploitation to only a few tree species. The T. guianensis and C. urucarana tree species should be considered the most important species for management plans and the preservation of black-tufted marmosets that live in urban forests in the Cerrado.

Brazilian cerrado species: wood characteristics / Espécies do cerrado brasileiro: características da madeira

The characterization of wood anatomy and proprieties can provide subsidies for rational use of tree species. Enables, oftentimes, the definition of technological potential of wood - and wood products - through the assessment of quality information and also allows it ́s correct identification, contributing to the timber production chain. The objective of this study was to contribute to the knowledge about wood properties of the Cerrado biome (Brazilian savanna) species trough the anatomical characterization and determination of density profile. Twenty trees species belonging to thirteen families occurring in Pirenópolis, Goiás and Brasília, Federal District, Brazil, was selected and radial samples were removed from the tree trunks at the DBH (1.30 m) in a non-destructive way using an incremental probe and a motorized extractor. The qualitative and quantitative anatomical parameters of vessels and fibers and the wood density were determined in the collected samples. Species presented fibers with mean values between 900.5 and 2052.9 µm for the length; 18.1 and 27.7 µm for the diameter; and 4.4 to 9.4 µm for the wall thickness. The species presented a variation in the vessel dimensions from 29.2 to 155.6 µm for the diameter; 17.7 to 32.5% for occupied area; and 2.6 to 165 to vessels.mm-2. The apparent density presented mean values between 0.36 and 1.21 g cm-3. The specie that presented the highest variation of wood density was A. fraxinifolium. According to the radial profiles two patterns of increasing and stable variation in the apparent density of the pith to bark were defined as a function of the wood anatomical characteristics.

A caracterização anatômica e das propriedades da madeira pode auxiliar na tomada de decisão quanto ao uso racional de espécies. Possibilita, muitas vezes, a definição do potencial tecnológico da madeira - e produtos - fornecendo acesso a informações sobre a sua qualidade, além de sua correta identificação, contribuído com a cadeia produtiva madeireira. O objetivo deste estudo foi investigar e caracterizar as propriedades da madeira de espécies arbóreas do Cerrado, através da descrição anatômica e determinação do perfil de densidade. Foram selecionadas 20 espécies pertencentes a treze famílias, na cidade de Pirenópolis, Goiás e Brasília, Distrito Federal, Brasil, e amostras radiais foram retiradas dos troncos das árvores no DAP (1,30 m) de forma não destrutiva, utilizando-se uma sonda de incremento e um extrator motorizado. Nas amostras coletadas, foram determinados os parâmetros anatômicos qualitativos e quantitativos dos vasos e das fibras e a densidade aparente da madeira. As espécies apresentaram fibras com valores médios entre 900,5 a 2052,9 µm para o comprimento; 18,1 a 27,7 µm para o diâmetro e 4,4 a 9,4 µm para a espessura da parede; e variação nas dimensões dos vasos de 29,2 a 155,6 µm para o diâmetro; 17,7 a 32,5% para área ocupada; e 2,6 a 165 vasos.mm-2 para a frequencia dos vasos. A densidade aparente apresentou valores médios entre 0,36 e 1,21 g cm-3. A espécie que apresentou a maior variação de densidade de madeira foi A. fraxinifolium. De acordo com os perfis radiais, dois padrões de variação crescente e estável na densidade aparente, da medula para casca, foram definidos como uma função das características anatômicas.