Thirty years of a bottom oxygen depletion-renewal cycle in the coastal yet deep environment of the West Saronikos Gulf (Greece): Its drivers and the impact on the benthic communities.

In the period 1987-2017, a series of physical and chemical measurements related to oxygen variability at a trough area with a maximum depth of ~420 m in the West Saronikos Gulf, reveal the following: In the early 90s, deep winter mixing occurred resulting in an oxygenation down to ~420 m followed by an oxygen decline. This decline reached near-bottom hypoxic conditions (O2 < ~62 µM (µmol/L)) after 1998, while a denitrification phase occurred after 2000 and a complete bottom anoxia in 2005. In June 2012, an oxygenation down to ~350 m was detected that most likely occurred in winter 2012. The 2012 oxygenation raised the until-then anoxic bottom concentrations to hypoxic ones in the years towards 2017 via vertical diffusive oxygen transfer. Observations of the benthic communities during the hypoxia, severe hypoxia (O2 < ~15 µM) and oxygen recovery phases showed a peak of opportunists in the hypoxia and a long faunal depletion in the severe hypoxia phases. A reversal in the benthic community structure appeared after the oxygenation of 2012 with the (re)appearance of opportunists while, in 2017, the community showed signs of retreat to earlier stages. The main anthropogenic pressure that could tentatively affect the oxygen concentration in the study area is posed by the Athens treated-sewage outfall at ~40 km away from the trough, which inputs organic matter into the Saronikos Gulf through effluent water of reduced salinity that, in addition, may alter the stratification opposing the vertical mixing. We show that the treated sewage output had no influence on a) the stratification, b) the particulate and dissolved organic carbon and c) the sewage-derived organic matter. Instead, the long-term dissolved oxygen variability with the deep renewal events was mostly driven by the large-scale atmosphere-ocean conditions (heat exchange and evaporation-minus-precipitation budget) that determine the hydrographic characteristics and the winter mixing.

Viral Metagenomic Content Reflects Seawater Ecological Quality in the Coastal Zone.

Viruses interfere with their host's metabolism through the expression of auxiliary metabolic genes (AMGs) that, until now, are mostly studied under large physicochemical gradients. Here, we focus on coastal marine ecosystems and we sequence the viral metagenome (virome) of samples with discrete levels of human-driven disturbances. We aim to describe the relevance of viromics with respect to ecological quality status, defined by the classic seawater trophic index (TRIX). Neither viral (family level) nor bacterial (family level, based on 16S rRNA sequencing) community structure correlated with TRIX. AMGs involved in the Calvin and tricarboxylic acid cycles were found at stations with poor ecological quality, supporting viral lysis by modifying the host's energy supply. AMGs involved in "non-traditional" energy-production pathways (3HP, sulfur oxidation) were found irrespective of ecological quality, highlighting the importance of recognizing the prevalent metabolic paths and their intermediate byproducts. Various AMGs explained the variability between stations with poor vs. good ecological quality. Our study confirms the pivotal role of the virome content in ecosystem functioning, acting as a "pool" of available functions that may be transferred to the hosts. Further, it suggests that AMGs could be used as an ultra-sensitive metric of energy-production pathways with relevance in the vulnerable coastal zone and its ecological quality.

Polychaetes of Greece: an updated and annotated checklist.

BACKGROUND: The last annotated checklist of marine polychaetes in Greece was published in 2001. Since then, global taxonomic progress, combined with many new species records for Greece, required a thorough review of the taxonomic, nomenclatural and biogeographic status of the national species list. This checklist revises the status of all extant polychaete species reported from the Greek Exclusive Economic Zone since 1832. The work was undertaken as part of the efforts on compiling a national species inventory (Greek Taxon Information System initiative) in the framework of the LifeWatchGreece Research Infrastructure. NEW INFORMATION: This checklist comprises an updated and annotated inventory of polychaete species in Greek waters, compiled from literature reports, online databases, museum collections and unpublished datasets. The list provides information on 836 species-level taxa from Greece, of which 142 are considered questionable. An additional 84 species reported in the past are currently considered absent from Greece; reasons for the exclusion of each species are given. Fourteen species are reported here for the first time from Greek waters. At least 52 species in the present list constitute in fact a complex of cryptic or pseudo-cryptic species. Forty-seven species are considered non-native to the area. In addition to the species-level taxa reported in this checklist, eleven genera have been recorded from Greece with no representatives identified to species level. One replacement name is introduced. For each species, a comprehensive bibliographic list of occurrence records in Greece and the synonyms used in these publications are provided as supplementary material. Where necessary, the taxonomic, nomenclatural or biogeographic status is discussed. Finally, the findings are discussed in the wider context of Mediterranean polychaete biogeography, taxonomic practice and worldwide research progress.

One Step forward: Benthic Pelagic Coupling and Indicators for Environmental Status.

A large data set from the Eastern Mediterranean was analyzed to explore the relationship between seawater column variables and benthic community status. Our results showed a strong quantitative link between the seawater column variables (Chlorophyll a and Eutrophication Index) and various indicators describing benthic diversity and community composition. The percentage of benthic opportunistic species increased significantly in the stations with high trophic status of the seawater column and so did the strength of the coupling between values of seawater column and benthic indicators. The Eutrophication Index threshold level of 0.85, separating the "Bad and Poor" from "Moderate to High" conditions could serve as an acceptable critical value above which there is a readily observable change in benthic community composition.

The rare subgroup C1 of Marphysa (Polychaeta, Eunicidae): re-description of species and first records in the Mediterranean Sea.

Marphysa is one of the largest genera in the family Eunicidae, containing 76 valid species. However, among them there are only five species that share the diagnostic characters of having only composite falcigers in inferior setae and branchiae confined in the anterior body. These species are relatively rare and less described while in their original descriptions their differentiation is mainly based on features believed to be age-specific today. In this study, the type-materials of M. adenensis, M. purcellana and M. gemmata have been re-examined and re-described with illustrations. For M. adenensis, new material from the Mediterranean Sea was also examined, where this group has not been recorded up to date. The above species were compared to each other and new differential characters are being highlighted. A revised key for the Marphysa species found in the Mediterranean is also provided. 

Chemical inputs from a karstic submarine groundwater discharge (SGD) into an oligotrophic Mediterranean coastal area.

The impacts of nutrient and other chemical inputs released by a submarine groundwater discharge (SGD) on the marine environment of an oligotrophic Mediterranean coastal area (Messiniakos Gulf, SE Ionian Sea) are investigated through a multidisciplinary approach. Nutrients and organic pollutants associated with the SGD are presented to study the chemical characteristics of the SGD and to investigate its effect on the marine ecosystem in comparison to freshwater discharges of the water bodies of Messinia Prefecture. Nutrient and organic pollutant fluxes were calculated from (214)Bi-based SGD estimates. An average of 22×10(3) mol of silicate per month and 8×10(3) mol of nitrate per month were released via the SGD. Nutrient concentrations at the mouth of the SGD were three times higher than in Messiniakos Gulf, and NO3(-) was the primary Dissolved Inorganic Nitrogen form discharged by SGD. Organic pollutant concentrations associated with agricultural activities were low at the SGD. The implementation of a Eutrophication Index (E.I.) showed that the water column at the SGD site corresponds to Moderate/Bad ecological quality, whereas the status switches rapidly to Good at a small distance from the SGD. Coastal areas influenced by river or sewage discharge correspond to a Moderate/Good ecological status. The BENTIX index used for the classification of the ecological quality status of the benthic macroinvertebrate communities showed that the SGD has a minor influence compared to the other freshwater discharges in Messiniakos Gulf. Though the SGD has a considerable outflow, morphology and hydrodynamics of the area favor the rapid dispersion of the upwelling water and degrades the SGD's effect even on a regional scale.