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Sci Rep ; 10(1): 14338, 2020 08 31.
Artigo em Inglês | MEDLINE | ID: mdl-32868844

RESUMO

GRAS genes belong to the plant-specific transcription factors (TF's) family that are known to be involved in plant growth and development. In this study, we have identified 37 genes from the bottle gourd genome that encodes for GRAS TF's. Except for the SCLA, we were able to identify at least one gene from each of the 17 subfamilies. Gene structure and chromosomal analysis showed that maximum seven genes are present on Chr7 followed by six genes on Chr1. The subcellular location analysis revealed that most of the genes were localized in the nucleus, except for a few in chloroplast and mitochondria. Additionally, we have identified one tandem gene duplication event on Chr7 and three major motifs that were present in all the GRAS genes. Furthermore, the protein-protein interaction prediction and gene expression analysis showed five candidate hub-genes interact with various other genes and thus probably control the expression of interacting partners in different plant tissues. Overall, this study provides a comprehensive analysis of GRAS transcription factors in bottle gourd genome which could be further extended to other vegetable crops.


Assuntos
Cucurbita/genética , Genoma de Planta , Fatores de Transcrição/metabolismo , Cromossomos de Plantas , Produtos Agrícolas/genética , Ligação Proteica , Frações Subcelulares/metabolismo
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