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1.
Curr Drug Metab ; 5(4): 283-90, 2004 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-15320700

RESUMO

One of the major advances in the recent history of the treatment of HIV infections has been the development of different classes of effective antiretroviral drugs. In particular, the reverse transcriptase (RT) inhibitors still represent the majority of the clinically used anti-HIV drugs and constitute the main backbone of currently employed combinatorial regimens. Highly active antiretroviral combination chemotherapy (HAART), combining RT and protease inhibitors, has proven the most effective approach to treat HIV disease, since it has been shown to markedly suppress viral replication and appearance of drug resistance for a relatively long period. These therapies, however, do not constitute a definitive cure, since they are not able to completely eradicate the virus from the infected individual. Beside drug toxicity problems, the emergence of drug resistance associated with the particular regimen employed further complicates the situation. This review will summarise the most recent achievements, as well as the future directions in the development of novel anti-RT compounds.


Assuntos
Infecções por HIV/tratamento farmacológico , Transcriptase Reversa do HIV/antagonistas & inibidores , Inibidores da Transcriptase Reversa/uso terapêutico , Animais , Infecções por HIV/enzimologia , Transcriptase Reversa do HIV/metabolismo , Humanos , Inibidores da Transcriptase Reversa/química , Inibidores da Transcriptase Reversa/farmacologia
2.
Gene Ther ; 10(25): 2052-8, 2003 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-14595377

RESUMO

Herpes simplex virus thymidine kinase (HSV-TK) is widely used in gene therapy. The enzymatic activity of HSV-TK may be traced in vivo by specific radiopharmaceuticals in order to image transgene expression. However, most of these radiopharmaceuticals are toxic per se or after activation by HSV-TK, and therefore do not represent ideal molecules for clinical applications and repeated imaging. Unlike human cytosolic TK, HSV-TK is not enantioselective and can efficiently phosphorylate both D and L enantiomers of beta-thymidine. Here we show that, after phosphorylation by HSV-TK, tritiated L-beta-thymidine (LT) is selectively retained inside the cells in vitro and in vivo. We used the in vivo accumulation of radioactive phosphorylated LT to image the HSV-TK-positive cells inside a transplantable murine brain tumour after inoculation of cells producing retroviruses carrying HSV-TK. Owing to their unnatural enantiomeric conformation, phosphorylated LT metabolites are very poorly processed by mammalian enzymes, thus leading to increased cellular retention and minimal toxicity. The ability to image cells expressing the HSV-TK gene by using radiolabelled LT, without damaging the cells accumulating the phosphorylated L-nucleoside, will be important to monitor the levels and spatial distribution of therapeutic vectors carrying HSV-TK.


Assuntos
Terapia Genética/métodos , Simplexvirus/enzimologia , Timidina Quinase/genética , Animais , Autorradiografia , Linhagem Celular , Linhagem Celular Tumoral , Expressão Gênica , Humanos , Isoenzimas , Camundongos , Camundongos Endogâmicos C57BL , Fosforilação , Compostos Radiofarmacêuticos/metabolismo , Timidina/metabolismo , Transgenes , Trítio/metabolismo
3.
J Mol Biol ; 313(4): 683-94, 2001 Nov 02.
Artigo em Inglês | MEDLINE | ID: mdl-11697897

RESUMO

Hepatitis C virus (HCV) NS3 protein is a multifunctional enzyme, possessing protease, NTPase and helicase activities within a single polypeptide of 625 amino acid residues. These activities are essential for the virus life cycle and are considered attractive targets for anti-HCV chemotherapy. Beside ATP, the NS3 protein has the ability to utilise deoxynucleoside triphosphates (dNTPs) as the energy source for nucleic acid unwinding. We have performed an extensive analysis of the substrate specificities of both NS3 NTPase and helicase activities with respect to all four dNTPs as well as with dideoxynucleoside triphoshate (ddNTP) analogs, including both d-(beta) and l-(beta)-deoxy and dideoxy-nucleoside triphosphates. Our results show that almost all dNTPs and ddNTPs tested were able to inhibit hydrolysis of ATP by the NTPase activity, albeit with different efficiencies. Moreover, this activity showed almost no stereoselectivity, being able to recognise both d-(beta), l-(beta)-deoxy and ddNTPs. On the contrary, the helicase activity had more strict substrate selectivity, since, among d-(beta)-nucleotides, only ddTTP and its analog 2',3'-didehydro-thymidine triphosphate could be used as substrates with an efficiency comparable to ATP, whereas among l-(beta)-nucleotides, only l-(beta)-dATP was utilised. Comparison of the steady-state kinetic parameters for both reactions, suggested that dATP, l-(beta)-dCTP and l-(beta)-dTTP, specifically reduced a rate limiting step present in the helicase, but not in the NTPase, reaction pathway. These results suggest that NS3-associated NTPase and helicase activities have different sensitivities towards different classes of deoxy and dideoxy-nucleoside analogs, depending on a specific step in the reaction, as well as show different enantioselectivity for the d-(beta) and l-(beta)-conformations of the sugar ring. These observations provide an essential mechanistic background for the development of specific nucleotide analogs targeting either activity as potential anti-HCV agents.


Assuntos
Hepacivirus/enzimologia , Nucleotídeos/química , Nucleotídeos/metabolismo , Proteínas não Estruturais Virais/metabolismo , Trifosfato de Adenosina/análogos & derivados , Trifosfato de Adenosina/metabolismo , DNA/metabolismo , Ensaio de Desvio de Mobilidade Eletroforética , Hepacivirus/genética , Hidrólise , Cinética , Estereoisomerismo , Especificidade por Substrato , Termodinâmica , Proteínas não Estruturais Virais/antagonistas & inibidores , Proteínas não Estruturais Virais/genética
4.
Proc Natl Acad Sci U S A ; 98(25): 14298-303, 2001 Dec 04.
Artigo em Inglês | MEDLINE | ID: mdl-11724925

RESUMO

DNA polymerase (pol) delta is essential for both leading and lagging strand DNA synthesis during chromosomal replication in eukaryotes. Pol delta has been implicated in the Okazaki fragment maturation process for the extension of the newly synthesized fragment and for the displacement of the RNA/DNA segment of the preexisting downstream fragment generating an intermediate flap structure that is the target for the Dna2 and flap endonuclease-1 (Fen 1) endonucleases. Using a single-stranded minicircular template with an annealed RNA/DNA primer, we could measure strand displacement by pol delta coupled to DNA synthesis. Our results suggested that pol delta alone can displace up to 72 nucleotides while synthesizing through a double-stranded DNA region in a distributive manner. Proliferating cell nuclear antigen (PCNA) reduced the template dissociation rate of pol delta, thus increasing the processivity of both synthesis and strand displacement, whereas replication protein A (RP-A) limited the size of the displaced fragment down to 20-30 nucleotides, by generating a "locked" flap DNA structure, which was a substrate for processing of the displaced fragment by Fen 1 into a ligatable product. Our data support a model for Okazaki fragment processing where the strand displacement activity of DNA polymerase delta is modulated by the concerted action of PCNA, RP-A and Fen 1.


Assuntos
DNA Polimerase III/metabolismo , DNA/metabolismo , Animais , Sequência de Bases , Bovinos , DNA Ligases/metabolismo , Primers do DNA , Replicação do DNA , Proteínas de Ligação a DNA/metabolismo , Endodesoxirribonucleases/metabolismo , Endonucleases Flap , Técnicas In Vitro , Cinética , Modelos Biológicos , Antígeno Nuclear de Célula em Proliferação/metabolismo , Proteína de Replicação A
5.
J Biol Chem ; 276(48): 44653-62, 2001 Nov 30.
Artigo em Inglês | MEDLINE | ID: mdl-11572864

RESUMO

The human immunodeficiency virus type 1 (HIV-1) nonnucleoside reverse transcriptase (RT) inhibitor pyrrolopyridooxazepinone (PPO) derivative, (+/-)-PPO294, was shown to be active toward wild type and mutated HIV-1 RT and to act synergistically in combination with 3'-azido-3'-deoxythymidine (Campiani, G., Morelli, E., Fabbrini, M., Nacci, V., Greco, G., Novellino, E., Ramunno, A., Maga, G., Spadari, S., Caliendo, G., Bergamini, A., Faggioli, E., Uccella, I., Bolacchi, F., Marini, S., (1999) J. Med. Chem. 42, 4462-4470). The (+/-)-PPO294 racemate was resolved into its pure enantiomers, and the absolute configuration was determined by x-ray analysis. Only one enantiomer, (R)-(-)-PPO464, displayed antiviral activity against both the wild type and the K103N mutant HIV-1 RT and was found to interact exclusively with the reaction intermediate formed by RT complexed with both the DNA and the nucleotide substrates. Being the first compound of its class to display this behavior, (R)-(-)-PPO464 is the representative of a novel generation of nonnucleoside inhibitors. (R)-(-)-PPO464 showed significant synergism when tested in combination with other RT inhibitors and efficiently inhibited viral replication when tested against the laboratory strain HIV-1 IIIB or against either wild type or multidrug-resistant clinical isolates. Pharmacokinetic studies in mice and rats showed a more favorable profile for (R)-(-)-PPO464 than for the corresponding racemate. (R)-(-)-PPO464 was also found to easily cross the blood-brain barrier. The coadministration of the HIV-1 protease inhibitor ritonavir increased the bioavailability of (R)-(-)-PPO464, having little effect on its plasma and brain elimination rates.


Assuntos
Azepinas/farmacologia , Azepinas/farmacocinética , Transcriptase Reversa do HIV/metabolismo , Piridinas/farmacologia , Piridinas/farmacocinética , Inibidores da Transcriptase Reversa/farmacologia , Animais , Antivirais/farmacologia , Barreira Hematoencefálica/efeitos dos fármacos , Cristalografia por Raios X , Relação Dose-Resposta a Droga , Cinética , Masculino , Camundongos , Modelos Químicos , Mutação , Ligação Proteica , Ratos , Proteínas Recombinantes/metabolismo , Ritonavir/farmacologia , Especificidade por Substrato , Temperatura , Termodinâmica , Fatores de Tempo , Raios X
6.
Artigo em Inglês | MEDLINE | ID: mdl-11562969

RESUMO

Recently, beta-L-nucleoside analogues have emerged as a new class of sugar modified nucleosides with potential antiviral and/or antitumoral activity. As a part of our ongoing research on this topic, we decided to synthesize 5-CF3-beta-L-dUrd (7), the hitherto unknown L-enantiomer of Trifluridine, an antiherpetic drug approved by FDA but only used in topical applications due to concomitant cytotoxicity. 5-CF3-beta-L-dUrd (7) as well as some other related L-nucleoside derivatives were stereospecifically prepared and tested in vitro against viral (HSV-1 and HSV-2) and human thymidine kinases (TK).


Assuntos
Antivirais/síntese química , Nucleotídeos de Pirimidina/síntese química , Pirimidinas/síntese química , Antineoplásicos/síntese química , Antineoplásicos/farmacologia , Antivirais/farmacologia , Herpesvirus Humano 1/efeitos dos fármacos , Herpesvirus Humano 1/enzimologia , Herpesvirus Humano 2/efeitos dos fármacos , Herpesvirus Humano 2/enzimologia , Humanos , Nucleotídeos de Pirimidina/farmacologia , Pirimidinas/farmacologia , Estereoisomerismo , Timidina Quinase/antagonistas & inibidores
7.
J Med Chem ; 44(3): 305-15, 2001 Feb 01.
Artigo em Inglês | MEDLINE | ID: mdl-11462972

RESUMO

Quinoxalinylethylpyridylthioureas (QXPTs) represent a new class of human immunodeficiency virus type 1 (HIV-1) non-nucleoside reverse transcriptase (RT) inhibitors (NNRTIs) whose prototype is 6-FQXPT (6). Docking studies based on the three-dimensional structure of RT prompted the synthesis of novel heteroarylethylpyridylthioureas which were tested as anti-HIV agents. Several compounds proved to be potent broad-spectrum enzyme inhibitors and significantly inhibited HIV-1 replication in vitro. Their potency depends on the substituents and the nature of the heterocyclic skeleton linked to the ethyl spacer, and structure-activity relationships are discussed in terms of the possible interaction with the RT binding site. Although the new QXPTs analogues show potent antiviral activity, none of the compounds tested overcome the pharmacokinetic disadvantages inherent to ethylpyridylthioureidic antiviral agents, which in general have very low oral bioavailability. Through an integrated effort involving synthesis, docking studies, and biological and pharmacokinetic evaluation, we investigated the structural dependence of the poor bioavailability and rapid clearance within the thioureidic series of antivirals. Replacing the ethylthioureidic moiety with a hydrazine linker led to a new antiviral lead, offering promising pharmacological and pharmacokinetic properties in terms of antiviral activity and oral bioavailability.


Assuntos
Fármacos Anti-HIV/síntese química , Transcriptase Reversa do HIV/antagonistas & inibidores , Piridinas/síntese química , Quinoxalinas/síntese química , Inibidores da Transcriptase Reversa/síntese química , Tioureia/análogos & derivados , Tioureia/síntese química , Animais , Fármacos Anti-HIV/química , Fármacos Anti-HIV/farmacologia , Disponibilidade Biológica , Linhagem Celular , Didanosina/farmacologia , Sinergismo Farmacológico , HIV-1/efeitos dos fármacos , Humanos , Camundongos , Modelos Moleculares , Piridinas/química , Piridinas/farmacologia , Quinoxalinas/química , Quinoxalinas/farmacologia , Inibidores da Transcriptase Reversa/química , Inibidores da Transcriptase Reversa/farmacologia , Estereoisomerismo , Relação Estrutura-Atividade , Tioureia/química , Tioureia/farmacologia , Zidovudina/farmacologia
8.
Bioorg Med Chem ; 9(7): 1731-8, 2001 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-11425574

RESUMO

As a part of our ongoing work on beta-L-nucleoside analogues as potential antiviral drugs, we have synthesized 5-(trifluoromethyl)-beta-L-2'-deoxyuridine (L-TFT), the hitherto unknown L-enantiomer of trifluorothymidine (CF(3)dUrd, TFT). We have also studied the effect of L-TFT on human and herpes simplex virus (HSV) type 1 and 2 thymidine kinases, and human thymidine phosphorylase, as well as its anti-HSV-1 and anti-HSV-2 activities in cell cultures. L-TFT has been found: (i) to inhibit HSV-1 TK with activity comparable to TFT, with no effect on human TK, (ii) to be phosphorylated by the viral enzyme with similar efficiency to TFT, (iii) to be resistant, in contrast to TFT, to hydrolysis by human thymidine phosphorylase. Unfortunately, when evaluated in cell cultures, L-TFT did not show any anti-HSV-1 and anti-HSV-2 activities.


Assuntos
Antivirais/síntese química , Antivirais/farmacologia , Herpesvirus Humano 1/efeitos dos fármacos , Herpesvirus Humano 2/efeitos dos fármacos , Uridina/síntese química , Uridina/farmacologia , Antivirais/química , Células Cultivadas , Inibidores Enzimáticos/síntese química , Inibidores Enzimáticos/química , Inibidores Enzimáticos/farmacologia , Herpesvirus Humano 1/enzimologia , Herpesvirus Humano 2/enzimologia , Espectroscopia de Ressonância Magnética , Testes de Sensibilidade Microbiana , Fosforilação , Espectrometria de Massas de Bombardeamento Rápido de Átomos , Estereoisomerismo , Timidina Quinase/antagonistas & inibidores , Timidina Quinase/metabolismo , Timidina Fosforilase/antagonistas & inibidores , Timidina Fosforilase/metabolismo , Uridina/análogos & derivados , Uridina/química , Uridina/metabolismo
9.
J Biol Chem ; 276(21): 18235-42, 2001 May 25.
Artigo em Inglês | MEDLINE | ID: mdl-11278525

RESUMO

The current view of DNA replication in eukaryotes predicts that DNA polymerase alpha (pol alpha)-primase synthesizes the first 10-ribonucleotide-long RNA primer on the leading strand and at the beginning of each Okazaki fragment on the lagging strand. Subsequently, pol alpha elongates such an RNA primer by incorporating about 20 deoxynucleotides. pol alpha displays a low processivity and, because of the lack of an intrinsic or associated 3'--> 5' exonuclease activity, it is more error-prone than other replicative pols. Synthesis of the RNA/DNA primer catalyzed by pol alpha-primase is a critical step in the initiation of DNA synthesis, but little is known about the role of the DNA replication accessory proteins in its regulation. In this paper we provide evidences that the single-stranded DNA-binding protein, replication protein A (RP-A), acts as an auxiliary factor for pol alpha playing a dual role: (i) it stabilizes the pol alpha/primer complex, thus acting as a pol clamp; and (ii) it significantly reduces the misincorporation efficiency by pol alpha. Based on these results, we propose a hypothetical model in which RP-A is involved in the regulation of the early events of DNA synthesis by acting as a "fidelity clamp" for pol alpha.


Assuntos
DNA Polimerase I/metabolismo , Replicação do DNA , Proteínas de Ligação a DNA/metabolismo , Animais , DNA/metabolismo , Ligação Proteica , Proteína de Replicação A
10.
Antimicrob Agents Chemother ; 45(4): 1192-200, 2001 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-11257034

RESUMO

Combinations of reverse transcriptase (RT) inhibitors are currently used in anti-human immunodeficiency virus therapy in order to prevent or delay the emergence of resistant virus and to improve the efficacy against viral enzymes carrying resistance mutations. Drug-drug interactions can result in either positive (additive or synergistic inhibition) or adverse (antagonistic interaction, synergistic toxicity) effects. Elucidation of the nature of drug interaction would help to rationalize the choice of antiretroviral agents to be used in combination. In this study, different combinations of nucleoside and nonnucleoside inhibitors, including D- and L-(beta)-deoxy- and -dideoxynucleoside triphosphate analogues, have been tested in in vitro RT assays against either recombinant wild-type RT or RT bearing clinically relevant nonnucleoside inhibitor resistance mutations (L100I, K103N, Y181I), and the nature of the interaction (either synergistic or antagonistic) of these associations was evaluated. The results showed that (i) synergy of a combination was not always equally influenced by the individual agents utilized, (ii) a synergistic combination could improve the sensitivity profile of a drug-resistant mutant enzyme to the single agents utilized, (iii) L-(beta)-enantiomers of nucleoside RT inhibitors were synergistic when combined with nonnucleoside RT inhibitors, and (iv) inter- and intracombination comparisons of the relative potencies of each drug could be used to highlight the different contributions of each drug to the observed synergy.


Assuntos
Fármacos Anti-HIV/farmacologia , Didesoxinucleosídeos/farmacologia , Resistência Microbiana a Medicamentos , Transcriptase Reversa do HIV/antagonistas & inibidores , Inibidores da Transcriptase Reversa/farmacologia , Alcinos , Benzoxazinas , Ciclopropanos , Replicação do DNA/efeitos dos fármacos , DNA Viral/efeitos dos fármacos , Didesoxinucleotídeos , Relação Dose-Resposta a Droga , Sinergismo Farmacológico , Transcriptase Reversa do HIV/genética , Humanos , Concentração Inibidora 50 , Mutação , Nevirapina/farmacologia , Oxazinas/farmacologia , Estereoisomerismo , Nucleotídeos de Timina/farmacologia , Zidovudina/análogos & derivados , Zidovudina/farmacologia
11.
Curr Cancer Drug Targets ; 1(2): 141-53, 2001 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-12188887

RESUMO

Several cytokines and growth factors modulate angiogenesis through a fine tuned paracrine or autocrine mode of action. Among them is plateled-derived endothelial cell growth factor (PD-ECGF), which is highly is expressed in tumors, and is angiogenic by stimulation of endothelial cell migration. Studies have shown that PD-ECGF is identical to the well known enzyme thymidine phosphorylase (TP), which is involved in thymidine metabolism and homeostasis. Interestingly, PD-ECGF plays an angiogenic role as a result of its TP enzyme activity. In light of these findings, PD-ECGF/TP should not be considered a true growth factor, and its PD-ECGF name is now actually a misnomer. Recently, TP activity was thought of as an interesting potential two-face target for controling tumor-dependent angiogenesis. In fact, on one hand, its high levels of expression in tumors compared to non-neoplastic regions, and its broad substrate specificity suggested that TP could be used as an enzymatic tool to locally activate anticancer nucleoside bases or base analogs. On the other hand, its enzyme-dependent angiogenic activity engendered the search for specific inhibitors to reduce TP-dependent angiogenesis. This review will describe TP, its activity, its possible mechanisms of action and its role in angiogenesis. Particular attention will be focused on the design and biological characterization of novel TP inhibitors which recently showed promising anticancer activity.


Assuntos
Fatores de Crescimento Endotelial/fisiologia , Neoplasias/enzimologia , Neovascularização Patológica , Timidina Fosforilase/fisiologia , Animais , Antineoplásicos/metabolismo , Antineoplásicos/farmacologia , Inibidores Enzimáticos/uso terapêutico , Humanos , Neoplasias/irrigação sanguínea , Neoplasias/tratamento farmacológico , Timidina Fosforilase/antagonistas & inibidores
12.
Biochem J ; 351 Pt 2: 319-26, 2000 Oct 15.
Artigo em Inglês | MEDLINE | ID: mdl-11023816

RESUMO

The antiviral activity of several nucleoside analogues is often limited by their rapid degradation by pyrimidine nucleoside phosphorylases. In an attempt to avoid this degradation, several modified nucleosides have been synthesized. A series of 4'-thio-2'-deoxyuridines exhibits an anti-[herpes simplex virus (HSV)] activity significantly higher (20-600 times) than that shown by the corresponding 4'-oxy counterpart. We investigated the mode of action of these compounds and we found that: (i) several 4'-thio-2'-deoxyuridines are phosphorylated to the mono- and di-phosphates by HSV-1 thymidine kinase (TK) more efficiently than their corresponding 4'-oxy counterpart; (ii) both are inhibitors of cellular thymidylate synthase; (iii) 4'-thio-2'-deoxyuridines are resistant to phosphorolysis by human thymidine phosphorylase; (iv) both 4'-oxy- and 4'-thio-2'-deoxyuridines are phosphorylated to deoxyribonucleotide triphosphate in HSV-1-infected cells and are incorporated into viral DNA; (v) 4'-thio-2'-deoxyuridines are better inhibitors than their 4'-oxy counterparts of [(3)H]thymidine incorporation in HSV-1-infected cells; (vi) 4'-thio-2'-deoxyuridines are not recognized by HSV-1 and human uracil-DNA glycosylases. Our data suggest that 4'-thio-2'-deoxyuridines, resistant to pyrimidine phosphorylase, can be preferentially or selectively phosphorylated by viral TK in HSV-infected cells, where they are further converted into triphosphate by cellular nucleotide kinases. Once incorporated into viral DNA, they are better inhibitors of viral DNA synthesis than their corresponding 4'-oxy counterpart, either because they are not recognized, and thus not removed, by viral uracil-DNA glycosylase, or because they preferentially interfere with viral DNA polymerase.


Assuntos
Antivirais/farmacologia , Simplexvirus/metabolismo , Tiouridina/análogos & derivados , Tiouridina/farmacologia , Plaquetas/metabolismo , Linhagem Celular , Cromatografia Líquida de Alta Pressão , Clonagem Molecular , DNA/biossíntese , DNA/efeitos dos fármacos , DNA Complementar/metabolismo , DNA Polimerase Dirigida por DNA/metabolismo , Células HeLa , Humanos , Cinética , Nucleosídeos/síntese química , Fosforilação , Tiouridina/síntese química , Timidina Quinase/metabolismo , Timidina Fosforilase/genética
13.
J Med Chem ; 43(13): 2601-7, 2000 Jun 29.
Artigo em Inglês | MEDLINE | ID: mdl-10891120

RESUMO

Thymidine phosphorylase/platelet-derived endothelial cell growth factor (TP/PD-ECGF) is an enzyme involved in thymidine metabolism and homeostasis, and its catalytic activity appears to play an important role in angiogenesis. Here we describe the cloning and expression of a His-tagged human TP/PD-ECGF and its assay with uracil and thymine analogues. We present the design, synthesis, and biological evaluation of novel 6-(phenylalkylamino)uracil derivatives which, at micromolar concentrations, inhibit both catabolic and anabolic reactions of human TP in vitro. These base analogues are not converted by the enzyme into the nucleoside form, thus representing pure nonsubstrate inhibitors of the enzyme.


Assuntos
Antineoplásicos/síntese química , Inibidores Enzimáticos/síntese química , Timidina Fosforilase/antagonistas & inibidores , Uracila/análogos & derivados , Uracila/síntese química , Sequência de Aminoácidos , Antineoplásicos/química , Plaquetas/química , Clonagem Molecular , Inibidores Enzimáticos/química , Humanos , Dados de Sequência Molecular , Neoplasias/irrigação sanguínea , Neovascularização Patológica/tratamento farmacológico , Relação Estrutura-Atividade , Timidina Fosforilase/isolamento & purificação , Timidina Fosforilase/metabolismo , Uracila/química
14.
Antivir Chem Chemother ; 11(2): 141-55, 2000 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-10819438

RESUMO

New heterocyclic derivatives of ethylpyridylthiourea, quinoxalinylethylpyridylthiourea (QXPT) and analogues, inhibited human immunodeficiency virus type 1 (HIV-1) reverse transcriptase (RT) activity and prevented HIV-1 cytopathogenicity in T4 lymphocytes. Several of these novel non-nucleoside RT inhibitors, with a substituted pyrroloquinoxalinone heteroaromatic skeleton, showed inhibitory activity against wild-type RT as well as against mutant RTs containing the single amino acid substitutions L1001, K103N, V106A, Y1811 and Y188L that was much greater than other non-nucleoside inhibitors such as nevirapine. Maximum potency in enzymatic assays was achieved with a fluoropyrroloquinoxaline skeleton linked to the ethylpyridylthiourea moiety (FQXPT). In cell-based assays on different cell lines and on human monocyte-macrophages, 6-FQXPT exhibited EC50 values in the nanomolar range, with a promising selectivity index. Moreover, 6-FQXPT showed synergistic antiviral activity with zidovudine.


Assuntos
HIV-1/efeitos dos fármacos , Quinoxalinas/síntese química , Quinoxalinas/farmacologia , Inibidores da Transcriptase Reversa/síntese química , Inibidores da Transcriptase Reversa/farmacologia , Tioureia/análogos & derivados , Substituição de Aminoácidos , Animais , Transcriptase Reversa do HIV/antagonistas & inibidores , Transcriptase Reversa do HIV/genética , HIV-1/enzimologia , Humanos , Masculino , Camundongos , Camundongos Endogâmicos , Mutação , Nucleosídeos/química , Tioureia/síntese química , Tioureia/farmacologia
15.
Antimicrob Agents Chemother ; 44(5): 1186-94, 2000 May.
Artigo em Inglês | MEDLINE | ID: mdl-10770750

RESUMO

Accumulating data have brought the nonnucleoside reverse transcriptase (RT) inhibitors (NNRTIs) into the forefront of antiretroviral therapy. Among the emerging compounds in this class, a particularly attractive one is efavirenz (Sustiva), recently approved for clinical use by the U.S. Food and Drug Administration. In the present study, the equilibrium dissociation constants for efavirenz binding to the different catalytic forms of human immunodeficiency virus type 1 RT as well as the association and dissociation rates have been determined using a steady-state kinetic approach. In addition, the same enzymological analysis has been extended to the thio-substituted analog, sefavirenz, which showed comparable activity in vitro against RT. Both compounds have been found to act as purely uncompetitive inhibitors at low drug concentrations (5 to 50 nM) and as mixed noncompetitive inhibitors at higher doses (50 to 500 nM). This behavior can be interpreted in terms of the relative affinities for the different catalytic forms of the enzyme. Both efavirenz and sefavirenz showed increasing affinities for the different forms of RT in the following order: free enzyme < (i.e., bound with lower affinity) binary RT-template-primer (TP) complex < ternary RT-TP-deoxynucleoside triphosphate (dNTP) complex. The rate of binding of the two inhibitors to the different enzyme-substrate complexes was well below the diffusion limit (on the order of 10(4) M(-1) s(-1)); however, both inhibitors, when bound to the ternary RT-TP-dNTP complex, showed very low dissociation rates, on the order of 10(-4) s(-1) for both compounds, typical of tightly binding inhibitors. Thus, efavirenz and its thio-substituted derivative sefavirenz appear to be peculiar in their mechanism of action, being selective tightly binding inhibitors of the ternary RT-TP-dNTP complex. Efavirenz is the first clinically approved NNRTI to show this property.


Assuntos
Fármacos Anti-HIV/farmacologia , Transcriptase Reversa do HIV/antagonistas & inibidores , HIV-1/enzimologia , Oxazinas/farmacologia , Inibidores da Transcriptase Reversa/farmacologia , Alcinos , Fármacos Anti-HIV/síntese química , Fármacos Anti-HIV/química , Benzoxazinas , Ligação Competitiva , Domínio Catalítico , Ciclopropanos , Didesoxinucleotídeos , Sinergismo Farmacológico , Transcriptase Reversa do HIV/metabolismo , HIV-1/efeitos dos fármacos , Humanos , Cinética , Oxazinas/síntese química , Oxazinas/química , Inibidores da Transcriptase Reversa/síntese química , Inibidores da Transcriptase Reversa/química , Nucleotídeos de Timina/farmacologia , Zidovudina/análogos & derivados , Zidovudina/farmacologia
16.
J Mol Biol ; 295(4): 791-801, 2000 Jan 28.
Artigo em Inglês | MEDLINE | ID: mdl-10656791

RESUMO

An important not yet fully understood event in DNA replication is the DNA polymerase (pol) switch from pol alpha to pol delta. Indirect evidence suggested that the clamp loader replication factor C (RF-C) plays an important role, since a replication competent protein complex containing pol alpha, pol delta and RF-C could perform pol switching in the presence of proliferating cell nuclear antigen (PCNA). By using purified pol alpha/primase, pol delta, RF-C, PCNA and RP-A we show that: (i) RF-C can inhibit pol alpha in the presence of ATP prior to PCNA loading, (ii) RF-C decreases the affinity of pol alpha for the 3'OH primer ends, (iii) the inhibition of pol alpha by RF-C is released upon PCNA loading, (iv) ATP hydrolysis is required for PCNA loading and subsequent release of inhibition of pol alpha, (v) under these conditions a switching from pol alpha/primase to pol delta is evident. Thus, RF-C appears to be critical for the pol alpha to pol delta switching. Based on these results, a model is proposed in which RF-C induces the pol switching by sequestering the 3'-OH end from pol alpha and subsequently recruiting PCNA to DNA.


Assuntos
DNA Polimerase III/metabolismo , DNA Polimerase I/metabolismo , Replicação do DNA , Proteínas de Ligação a DNA/metabolismo , Proteínas de Homeodomínio , Antígeno Nuclear de Célula em Proliferação/metabolismo , Proteínas Proto-Oncogênicas c-bcl-2 , Proteínas Repressoras , Proteínas de Saccharomyces cerevisiae , Trifosfato de Adenosina/metabolismo , Animais , Bovinos , Citosol/enzimologia , DNA Primase/metabolismo , Células HeLa , Humanos , Cinética , Antígenos de Histocompatibilidade Menor , Proteína de Replicação C , Vírus 40 dos Símios/genética , Vírus 40 dos Símios/fisiologia , Especificidade por Substrato , Timo/enzimologia , Replicação Viral
17.
J Med Chem ; 42(21): 4462-70, 1999 Oct 21.
Artigo em Inglês | MEDLINE | ID: mdl-10543890

RESUMO

Pyrrolobenzoxazepinone (PBO) derivatives represent a new class of human immunodeficiency virus type 1 (HIV-1) non-nucleoside reverse transcriptase (RT) inhibitors (NNRTs) whose prototype is (+/-)-6-ethyl-6-phenylpyrrolo[2,1-d][1,5]benzoxazepin-7(6H)- one (6). Docking studies based on the three-dimensional structure of RT prompted the synthesis and biological evaluation of novel derivatives and analogues of 6 featuring a meta-substituted phenyl or a 2-thienyl ring at C-6 and a pyridine system in place of the fused-benzene ring to yield pyrrolopyridooxazepinones (PPOs). Compared with the lead 6 and nevirapine, several of the synthesized compounds (PBOs 13a-d and PPOs 13i-k) displayed higher inhibitory activity against wild-type RT and clinically relevant mutant RTs containing the single amino acid substitutions L100I, K103N, V106A, Y181I, and Y188L. The most potent inhibitors were further evaluated for in vitro antiviral activity on lymphocytes and monocyte-macrophages, for cytotoxicity on a panel of cell lines, and for potential synergistic antiviral activity with AZT. Pharmacokinetic studies performed on 13b, 13c, and 13i showed that these compounds achieve high concentrations in the brain. The results of the biological and pharmacokinetic experiments suggest a potential clinical utility of analogues such as 13b-d, 13i, and 13j, in combination with nucleoside RT inhibitors, against strains of HIV-1 bearing those mutations that confer resistance to known NNRTI.


Assuntos
Fármacos Anti-HIV/síntese química , Azepinas/síntese química , Transcriptase Reversa do HIV/antagonistas & inibidores , HIV-1/efeitos dos fármacos , Inibidores da Transcriptase Reversa/síntese química , Animais , Fármacos Anti-HIV/química , Fármacos Anti-HIV/farmacologia , Fármacos Anti-HIV/toxicidade , Azepinas/química , Azepinas/farmacologia , Azepinas/toxicidade , Linhagem Celular , Desenho de Fármacos , Sinergismo Farmacológico , Imunofluorescência , Humanos , Camundongos , Modelos Moleculares , Inibidores da Transcriptase Reversa/química , Inibidores da Transcriptase Reversa/farmacologia , Inibidores da Transcriptase Reversa/toxicidade , Relação Estrutura-Atividade , Zidovudina/farmacologia
18.
Nucleosides Nucleotides ; 18(4-5): 709-11, 1999.
Artigo em Inglês | MEDLINE | ID: mdl-10432670

RESUMO

In a recent paper the first selective inhibitors of HSV1 uracil-DNA glycosylase (UDG) acting in the micromolar range have been reported. A 28.5 kDa catalytic fragment of HSV1 UDG has been crystallized in the presence of uracil, and the structure was recently solved. Starting with the optimized model of binding between 6-(4'-n-octylanilino)uracil (octAU) and UDG some new derivatives have been predicted to be active. In vitro studies with the novel synthetized compounds confirm the plausibility of the model and define the structure features for UDG inhibitors.


Assuntos
DNA Glicosilases , Inibidores Enzimáticos/síntese química , Herpesvirus Humano 1/enzimologia , N-Glicosil Hidrolases/antagonistas & inibidores , Inibidores Enzimáticos/química , Modelos Moleculares , Termodinâmica , Uracila-DNA Glicosidase
19.
Nucleosides Nucleotides ; 18(4-5): 795-805, 1999.
Artigo em Inglês | MEDLINE | ID: mdl-10432681

RESUMO

We have compared the HIV-1 RT mutants containing the single substitutions L100I, K103N, V106A, V179D, Y181I and Y188L, known to confer NNI-resistance in treated patients, to HIV-1 RT wt for their sensitivity towards inhibition by D- and L-deoxy- and dideoxy-nucleoside tiphosphates. The results showed a differential effect of the substitutions on the affinity for both D- and L-enantiomers of deoxy- and dideoxy-nucleoside triphosphates and provide a rationale for the utilization of L-dideoxynucleoside analogs with NNI in combination chemotherapy.


Assuntos
Fármacos Anti-HIV/metabolismo , Infecções por HIV/tratamento farmacológico , Transcriptase Reversa do HIV/metabolismo , Nucleotídeos de Pirimidina/metabolismo , Inibidores da Transcriptase Reversa/metabolismo , Fármacos Anti-HIV/administração & dosagem , Fármacos Anti-HIV/uso terapêutico , Sítios de Ligação , Didesoxinucleosídeos/administração & dosagem , Didesoxinucleosídeos/uso terapêutico , Quimioterapia Combinada , Transcriptase Reversa do HIV/química , Transcriptase Reversa do HIV/genética , Humanos , Cinética , Mutação , Estrutura Secundária de Proteína , Nucleotídeos de Pirimidina/administração & dosagem , Nucleotídeos de Pirimidina/uso terapêutico , Inibidores da Transcriptase Reversa/administração & dosagem , Inibidores da Transcriptase Reversa/uso terapêutico , Estereoisomerismo
20.
Nucleosides Nucleotides ; 18(4-5): 867-9, 1999.
Artigo em Inglês | MEDLINE | ID: mdl-10432697

RESUMO

We demonstrate that L-ATP: 1) as well as its natural D-enantiomer, acts as a phosphate donor in the reaction catalysed by human deoxycytidine kinase; 2) inhibits human DNA-primase and the ATP-dependent T4 DNA ligase. Thus, the lack of enantioselectivity of the enzymes is more frequent than it was believed a few years ago and we suggest that it would depend on chance more than on an evolutionary strategy.


Assuntos
Trifosfato de Adenosina/metabolismo , DNA Ligases/metabolismo , DNA Primase/metabolismo , Desoxicitidina Quinase/metabolismo , Humanos , Ligação Proteica , Estereoisomerismo , Especificidade por Substrato
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