RNA-Scoop: interactive visualization of transcripts in single-cell transcriptomes.

Recent advances in single-cell RNA sequencing technologies have made detection of transcripts in single cells possible. The level of resolution provided by these technologies can be used to study changes in transcript usage across cell populations and help investigate new biology. Here, we introduce RNA-Scoop, an interactive cell cluster and transcriptome visualization tool to analyze transcript usage across cell categories and clusters. The tool allows users to examine differential transcript expression across clusters and investigate how usage of specific transcript expression mechanisms varies across cell groups.

Coordination and hydrogen bonded network structures of Cu(II) with mixed ligands: a hybrid hydrogen bonded material, an infinite sandwich arrangement, and a 3-D net.

Mixed-ligand Cu(II) complexes with deprotonated trimesic acid and phenanthroline-type ligands were synthesised by solvothermal methods to form 2-D infinite hexagonal hydrogen bonded structures with additional trimesic acid (H3tma) molecules. The complex [Cu(phendione)2(H2tma)2].2(H3tma).1.65(CF3CH2OH).2.5(H2O), where phendione = 1,10-phenanthroline-5,6-dione, has hydrogen bonded networks of [Cu(phendione)2(H2tma)2] complexes interspersed with layers of H3tma with a topologically identical hydrogen bonding network. Whereas in [Cu(1,10-phenanthroline)(H2tma)2]2.2(H3tma), a dimeric Cu(II) complex hydrogen bonds directly to additional H3tma molecules to form a three-layered 2-D network resembling an infinite sandwich. The synthesis and structures of simple Cu(II) complexes of the phendione ligand are also reported. One of these, [Cu(phendione)2Br2] shows a particularly polar packing arrangement.