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1.
Biomaterials ; 25(17): 3429-38, 2004 Aug.
Artigo em Inglês | MEDLINE | ID: mdl-15020116

RESUMO

Polymer composites are potentially useful materials for orthopaedic applications as they can be tailored to closely match the various moduli of bone. The Cambridge epiphyseal cup has been designed using one such material, carbon-fibre-reinforced polybutyleneterephthalate (CFRPBT), so that more of the load can be transferred to bone in order to reduce bone loss around the implant. We have evaluated the suitability of CFRPBT for this application using several standard and custom biological tests, both in vitro and in vivo, and have also started the initial clinical evaluation of the prosthesis. CFRPBT showed no toxicity in bulk form and only minimal toxicity as a particulate. It was non-haemolytic, non-immunogenic and showed no genotoxicity. No adverse responses were seen after in vivo implantation, and the results obtained following 9 months of clinical evaluation have been very encouraging with a good clinical outcome and good bone bonding to the hydroxyapatite-coated CFRPBT.


Assuntos
Fêmur/patologia , Fibroblastos/efeitos dos fármacos , Reação a Corpo Estranho/patologia , Prótese de Quadril , Implantes Experimentais/efeitos adversos , Teste de Materiais/métodos , Poliésteres/química , Poliésteres/toxicidade , Salmonella typhimurium/efeitos dos fármacos , Acetábulo , Animais , Materiais Biocompatíveis , Testes de Carcinogenicidade , Linhagem Celular , Fêmur/cirurgia , Fibroblastos/patologia , Reação a Corpo Estranho/etiologia , Humanos , Camundongos , Camundongos Endogâmicos C3H , Testes de Mutagenicidade , Infecções Relacionadas à Prótese/etiologia , Infecções Relacionadas à Prótese/patologia , Salmonella typhimurium/citologia
2.
J Med Screen ; 8(4): 183-6, 2001.
Artigo em Inglês | MEDLINE | ID: mdl-11743034

RESUMO

OBJECTIVE: To measure the cervical and breast screening coverage of south Asian women in Wakefield, compared with other city residents. DESIGN: Pairwise measurement of screening histories of women whose names appeared to be south Asian, and of non-Asian women matched by date of birth and general practice. DATA SOURCE: Computerised records of screening histories held by West Yorkshire Central Services Agency, for the eight general practices in central Wakefield. RESULTS: 67% of south Asians and 75% of non-Asians had acceptable (not overdue) cervical screening histories (chi(2)=13.75, p<0.001). 53% of south Asians and 78% of non-Asians had acceptable breast screening histories (chi(2)=8.5, p<0.01) CONCLUSION: Interventions should be designed to improve coverage for breast screening among south Asian women. The need for such interventions for cervical screening is equivocal.


Assuntos
Neoplasias da Mama/diagnóstico , Programas de Rastreamento/métodos , Neoplasias do Colo do Útero/diagnóstico , Adulto , Idoso , Sudeste Asiático/etnologia , Neoplasias da Mama/epidemiologia , Feminino , Humanos , Programas de Rastreamento/estatística & dados numéricos , Pessoa de Meia-Idade , Reino Unido/epidemiologia , Neoplasias do Colo do Útero/epidemiologia
3.
Mol Biochem Parasitol ; 114(1): 41-52, 2001 Apr 25.
Artigo em Inglês | MEDLINE | ID: mdl-11356512

RESUMO

Cysteine-proteinases from parasitic protozoa have been recently characterized as factors of virulence and pathogenicity in several human and veterinary diseases. In Chagas' disease, the chronic infection caused by Trypanosoma cruzi, structure-functional studies on cysteine proteases were thus far limited to the parasite's major isoform, a cathepsin L-like lysosomal protease designated as cruzipain, cruzain or GP57/51. Encoded by a large gene family, cruzipain is efficiently targeted by synthetic inhibitors, which prevent parasite intracellular growth and differentiation. We have previously demonstrated that the multicopy cruzipain gene family includes polymorphic sequences, which could encode functionally different isoforms. We report here a comparative kinetic study between cruzain, the archetype of the cruzipain family, and an isoform, termed cruzipain 2, which is expressed preferentially by the mammalian stages of T. cruzi. Heterologous expression of the catalytic domain of cruzipain 2 in Saccharomyces cerevisae yielded an enzyme that differs markedly from cruzain with respect to pH stability, substrate specificity and sensitivity to inhibition by natural and synthetic inhibitors of cysteine proteases. We suggest that the structural-functional diversification imparted by genetic polymorphism of cruzipain genes may have contributed to T. cruzi adaptation to vertebrate hosts.


Assuntos
Cisteína Endopeptidases/metabolismo , Inibidores de Cisteína Proteinase/farmacologia , Proteínas de Protozoários/metabolismo , Trypanosoma cruzi/enzimologia , Sequência de Aminoácidos , Animais , Antígenos de Protozoários/metabolismo , Cisteína Endopeptidases/química , Cisteína Endopeptidases/genética , Isoenzimas/química , Isoenzimas/genética , Isoenzimas/metabolismo , Cinética , Lisossomos/enzimologia , Dados de Sequência Molecular , Proteínas de Protozoários/química , Proteínas de Protozoários/genética , Proteínas Recombinantes/biossíntese , Proteínas Recombinantes/química , Alinhamento de Sequência , Homologia de Sequência de Aminoácidos , Especificidade por Substrato , Trypanosoma cruzi/genética
4.
J Biol Chem ; 276(11): 8118-24, 2001 Mar 16.
Artigo em Inglês | MEDLINE | ID: mdl-11115496

RESUMO

The steps involved in the maturation of proenzymes belonging to the papain family of cysteine proteases have been difficult to characterize. Intermolecular processing at or near the pro/mature junction, due either to the catalytic activity of active enzyme or to exogeneous proteases, has been well documented for this family of proenzymes. In addition, kinetic studies are suggestive of a slow unimolecular mechanism of autoactivation which is independent of proenzyme concentration. However, inspection of the recently determined x-ray crystal structures does not support this evidence. This is due primarily to the extensive distances between the catalytic thiolate-imidazolium ion pair and the putative site of proteolysis near the pro/mature junction required to form mature protein. Furthermore, the prosegments for this family of precursors have been shown to bind through the substrate binding clefts in a direction opposite to that expected for natural substrates. We report, using cystatin C- and N-terminal sequencing, the identification of autoproteolytic intermediates of processing in vitro for purified recombinant procathepsin B and procathepsin S. Inspection of the x-ray crystal structures reported to date indicates that these reactions occur within a segment of the proregion which binds through the substrate binding clefts of the enzymes, thus suggesting that these reactions are occurring as unimolecular processes.


Assuntos
Catepsina B/metabolismo , Catepsinas/metabolismo , Precursores Enzimáticos/metabolismo , Papaína/metabolismo , Sequência de Aminoácidos , Sítios de Ligação , Catálise , Catepsina B/química , Catepsinas/química , Precursores Enzimáticos/química , Humanos , Concentração de Íons de Hidrogênio , Dados de Sequência Molecular , Conformação Proteica , Proteínas Recombinantes/metabolismo
5.
Plant Dis ; 85(11): 1128-1139, 2001 Nov.
Artigo em Inglês | MEDLINE | ID: mdl-30823155
6.
FEBS Lett ; 475(3): 157-62, 2000 Jun 23.
Artigo em Inglês | MEDLINE | ID: mdl-10869547

RESUMO

Human cathepsin B, the most abundant lysosomal cysteine protease, has been implicated in a variety of important physiological and pathological processes. It has been known for a long time that like other lysosomal cysteine proteases, cathepsin B becomes inactivated and undergoes irreversible denaturation at neutral or alkaline pH. However, the mechanism of this denaturation process remains mostly unknown up to this day. In the present work, nuclear magnetic resonance spectroscopy was used to characterize the molecular origin of the neutral-pH inactivation and the refolding barrier of human cathepsin B. Two forms of human cathepsin B, the native form with Cys-29 at the active site and a mutant with Cys-29 replaced by Ala, were shown to have well-folded structures at the active and slightly acidic condition of pH 5. Surprisingly, while the native cathepsin B irreversibly unfolds at pH 7.5, the C29A mutant was found to maintain a stable three-dimensional structure at neutral pH conditions. In addition, replacement of Cys-29 by Ala renders the process of the urea denaturation of human cathepsin B completely reversible, in contrast to the opposite behavior of the wild-type cathepsin B. These results are very surprising in that replacement of one single residue, the active-site Cys-29, can eliminate the neutral-pH denaturation and the refolding barrier. We speculate that this finding may have important implications in understanding the process of pH-triggered inactivation commonly observed for most lysosomal cysteine proteases.


Assuntos
Catepsina B/química , Dobramento de Proteína , Cisteína , Humanos , Concentração de Íons de Hidrogênio , Espectroscopia de Ressonância Magnética
7.
Biochemistry ; 38(15): 4868-74, 1999 Apr 13.
Artigo em Inglês | MEDLINE | ID: mdl-10200176

RESUMO

The specificity of cysteine proteases is characterized by the nature of the amino acid sequence recognized by the enzymes (sequence specificity) as well as by the position of the scissile peptide bond (positional specificity, i.e., endopeptidase, aminopeptidase, or carboxypeptidase). In this paper, the interdependency of sequence and positional specificities for selected members of this class of enzymes has been investigated using fluorogenic substrates where both the position of the cleavable peptide bond and the nature of the sequence of residues in P2-P1 are varied. The results show that cathepsins K and L and papain, typically considered to act strictly as endopeptidases, can also display dipeptidyl carboxypeptidase activity against the substrate Abz-FRF(4NO2)A and dipeptidyl aminopeptidase activity against FR-MCA. In some cases the activity is even equal to or greater than that observed with cathepsin B and DPP-I (dipeptidyl peptidase I), which have been characterized previously as exopeptidases. In contrast, the exopeptidase activities of cathepsins K and L and papain are extremely low when the P2-P1 residues are A-A, indicating that, as observed for the normal endopeptidase activity, the exopeptidase activities rely heavily on interactions in subsite S2 (and possibly S1). However, cathepsin B and DPP-I are able to hydrolyze substrates through the exopeptidase route even in absence of preferred interactions in subsites S2 and S1. This is attributed to the presence in cathepsin B and DPP-I of specific structural elements which serve as an anchor for the C- or N-terminus of a substrate, thereby allowing favorable enzyme-substrate interaction independently of the P2-P1 sequence. As a consequence, the nature of the residue at position P2 of a substrate, which is usually the main factor determining the specificity for cysteine proteases of the papain family, does not have the same contribution for the exopeptidase activities of cathepsin B and DPP-I.


Assuntos
Papaína/metabolismo , Animais , Catepsinas/metabolismo , Inibidores de Cisteína Proteinase/farmacologia , Endopeptidases/metabolismo , Concentração de Íons de Hidrogênio , Cinética , Especificidade por Substrato
8.
Biochemistry ; 38(16): 5017-23, 1999 Apr 20.
Artigo em Inglês | MEDLINE | ID: mdl-10213604

RESUMO

Papain-like proenzymes are prone to autoprocess under acidic pH conditions. Similarly, peptides derived from the proregion of cathepsin B are potent pH-dependent inhibitors of that enzyme; i.e., at pH 6.0 the inhibition of human cathepsin B by its propeptide is defined by slow binding kinetics with a Ki of 3.7 nM and at pH 4.0 by classical kinetics with a Ki of 82 nM. This pH dependency is essentially eliminated either by the removal of a portion of the enzyme's occluding loop through deletion mutagenesis or by the mutation of either residue Asp22 or His110 to alanine; e.g., the mutant enzyme His110Ala is inhibited by its propeptide with Ki's of 2.0 +/- 0.3 nM at pH 4.0 and 1.1 +/- 0.2 nM at pH 6.0. For the His110Ala mutant the inhibition also displays slow binding kinetics at both pH 4.0 and pH 6.0. As shown by the crystal structure of mature cathepsin B [Musil, D., et al. (1991) EMBO J. 10, 2321-2330] Asp22 and His110 form a salt bridge in the mature enzyme, and it has been shown that this bridge stabilizes the occluding loop in its closed position [Nägler, D. K., et al. (1997) Biochemistry 36, 12608-12615]. Thus the pH dependency of propeptide binding can be explained on the basis of a competitive binding between the occluding loop and the propeptide. At low pH, when the Asp22-His110 pair forms a salt bridge stabilizing the occluding loop in its closed conformation, the loop more effectively competes with the propeptide than at higher pH where deprotonation of His110 and the concomitant destruction of the Asp22-His110 salt bridge results in a destabilization of the closed form of the loop. The rate of autocatalytic processing of procathepsin B to cathepsin B correlates with the affinity of the enzyme for its propeptide rather than with its catalytic activity, thus suggesting a possible influence of occluding loop stability on the rate of processing.


Assuntos
Catepsina B/química , Precursores Enzimáticos/química , Sequência de Aminoácidos , Animais , Catepsina B/antagonistas & inibidores , Catepsina B/genética , Catepsina B/metabolismo , Precursores Enzimáticos/antagonistas & inibidores , Precursores Enzimáticos/genética , Precursores Enzimáticos/metabolismo , Estabilidade Enzimática , Humanos , Concentração de Íons de Hidrogênio , Cinética , Dados de Sequência Molecular , Mutagênese Sítio-Dirigida , Fragmentos de Peptídeos/química , Conformação Proteica , Processamento de Proteína Pós-Traducional , Estrutura Secundária de Proteína , Ratos , Homologia de Sequência de Aminoácidos
9.
FEBS Lett ; 433(1-2): 78-82, 1998 Aug 14.
Artigo em Inglês | MEDLINE | ID: mdl-9738937

RESUMO

To demonstrate the usefulness of an engineered papain nitrile hydratase as a biocatalyst, a peptide amidrazone was prepared by incubation of the nitrile MeOCO-Phe-Alanitrile with the Gln19Glu papain mutant in the presence of salicylic hydrazide as a nucleophile. The amidrazone results from nucleophilic attack by salicylic hydrazide at the imino carbon of the thioimidate adduct formed between the enzyme and the peptide nitrile substrate. Compared to wild-type enzyme, the engineered nitrile hydratase causes a better than 4000-fold increase in the rate of amidrazone formation and yields a product of much higher purity. The advantages over other nitrile-hydrolyzing enzymes and current limitations of the papain nitrile hydratase are discussed.


Assuntos
Hidrazonas/síntese química , Hidroliases/metabolismo , Papaína/metabolismo , Engenharia de Proteínas , Catálise , Ácido Glutâmico , Glutamina , Hidrazonas/química , Hidroliases/genética , Hidrólise , Mutagênese , Papaína/genética , Pichia/genética , Proteínas Recombinantes , Salicilatos/química
10.
FEBS Lett ; 429(1): 9-16, 1998 Jun 05.
Artigo em Inglês | MEDLINE | ID: mdl-9657374

RESUMO

Selected fragments of the 62-residue proregion (or residues 1p-62p) of the cysteine protease cathepsin B were synthesized and their interactions with cathepsin B studied by use of proton NMR spectroscopy. Peptide fragments 16p-51p and 26p-51p exhibited differential perturbations of their proton resonances in the presence of cathepsin B. These resonance perturbations were lost for the further truncated 36p-51p fragment, but remained in the 26p-43p and 28p-43p peptide fragments. Residues 23p-26p or TWQ25A in the N-terminal 1p-29p fragment did not show cathepsin B-induced resonance perturbations although the same residues had strongly perturbed proton resonances within the 16p-51p peptide. Both the 1p-29p and 36p-51p fragments lack a common set of hydrophobic residues 30p-35p or F30YNVDI35 from the proregion. The presence of residues F30YNVDI35 appears to confer a conformational preference in peptide fragments 16p-51p, 26p-51p, 28p-43p and 26p-43p, but the same residues induce the aggregation of peptides 16p-36p and 1p-36p. The peptide fragment 26p-43p binds to the active site, as indicated by its inhibition of the catalytic activity of cathepsin B. The cathepsin B prosegment can therefore be reduced into smaller, but functional subunits 28p-43p or 26p-43p that retain specific binding interactions with cathepsin B. These results also suggest that residues F30YNVDI35 may constitute an essential element for the selective inhibition of cathepsin B by the full-length cathepsin B proregion.


Assuntos
Catepsina B/química , Proteínas Fúngicas/química , Mimetismo Molecular , Fragmentos de Peptídeos/química , Cisteína Endopeptidases/química , Espectroscopia de Ressonância Magnética , Pichia/química
11.
Biochemistry ; 36(41): 12608-15, 1997 Oct 14.
Artigo em Inglês | MEDLINE | ID: mdl-9376367

RESUMO

The main feature distinguishing cathepsin B from other cysteine proteases of the papain family is the presence of a large insertion loop, termed the occluding loop, which occupies the S' subsites of the enzyme. The loop is held in place mainly by two contacts with the rest of the enzyme, involving residues His110 and Arg116 on the loop that form salt bridges with Asp22 and Asp224, respectively. The influence of this loop on the endopeptidase activity of cathepsin B has been investigated using site-directed mutagenesis and internally quenched fluorogenic (IQF) substrates. Wild-type cathepsin B displays poor activity against the substrates Abz-AFRSAAQ-EDDnp and Abz-QVVAGA-EDDnp as compared to cathepsin L and papain. Appreciable increases in kcat/KM were observed for cathepsin B containing the single mutations D22A, H110A, R116A, and D224A. The highest activity however is observed for mutants where both loop to enzyme contacts are disrupted. For the triple-mutant D22A/H110A/R116A, an optimum kcat/KM value of 12 x 10(5) M-1 s-1 was obtained for hydrolysis of Abz-AFRSAAQ-EDDnp, which corresponds to a 600-fold increase relative to wild-type cathepsin B and approaches the level of activity observed with cathepsin L or papain. By comparison, the mutations have little effect on the hydrolysis of Cbz-FR-MCA. The influence of the mutations on the pH dependency of activity also indicates that the complexity of pH activity profiles normally observed for cathepsin B is related to the presence of the occluding loop. The major increase in endopeptidase activity is attributed to an increase in loop "flexibility" and suggests that the occluding loop might move when an endopeptidase substrate binds to the enzyme. The possible contribution of these interactions in regulating endopeptidase activity and the implications for cathepsin B activity in physiological or pathological conditions are discussed.


Assuntos
Catepsina B/química , Endopeptidases/química , Catepsina B/genética , Catepsina B/metabolismo , Endopeptidases/genética , Endopeptidases/metabolismo , Humanos , Concentração de Íons de Hidrogênio , Hidrólise , Mutação , Conformação Proteica
12.
Protein Expr Purif ; 11(1): 111-8, 1997 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-9325146

RESUMO

Recombinant human cystatin C (cC), a cysteine protease inhibitor, contained methionine sulfoxide [Met(O)] residues when expressed in Escherichia coli under aerobic conditions or upon allowing osmotic shock solutions from anaerobically grown cultures to warm to room temperature. Oxidation occurred in the periplasmic space or intracellularly during aerobic expression. Both Met14 and Met41 were subject to oxidation, as determined by NMR spectroscopy and mass spectrometry. Oxidation of Met110 was not observed. Growth under anaerobic conditions and modified purification procedures prevented oxidation. Through the use of a new form of affinity purification, cC was purified to > 99% in one step on E-64-papain-Sepharose (E-64 is 1-[N-[(L-3-trans-carboxyoxirane-2-carbonyl)-L-leucyl]amino]-4-g uanidinobutane), with elution with sodium trichloroacetate. The dissociation equilibrium constants (Kd) for the interaction of unoxidized cC, (Met(O)14)cC, and (Met(O)41)cC with S-(N-ethylsuccinimidyl)papain were experimentally identical: 1.8 (+/-0.2) x 10(-7), 1.6 (+/-0.2) x 10(-7), and 1.4 (+/-0.5) x 10(-7) M, respectively. This implies that the structure of the protease-binding region of mono-oxidized cC's was unchanged. The NMR observation of small, localized conformational changes was consistent with this. (Met(O)14)cC and (Met(O)14,Met(O)41)cC eluted earlier upon analytical affinity chromatography.


Assuntos
Cistatinas/isolamento & purificação , Metionina/metabolismo , Cromatografia de Afinidade , Cistatina C , Cistatinas/metabolismo , Escherichia coli , Humanos , Espectroscopia de Ressonância Magnética , Oxirredução , Proteínas Recombinantes/isolamento & purificação , Proteínas Recombinantes/metabolismo
13.
J Biol Chem ; 272(38): 23552-8, 1997 Sep 19.
Artigo em Inglês | MEDLINE | ID: mdl-9295292

RESUMO

Aromatic disulfides were found to inactivate truncated forms of the SHP-1 and PTP1B phosphatases by reaction with the essential active site cysteine residue. For truncated SHP-1 at pH 5.0, the reaction proceeded through an initial burst phase followed by a slower secondary phase. Our experiments demonstrated that the burst phase corresponded to the reaction of the aromatic disulfide with the active site cysteine. The magnitude of the burst phase was found to measure the active enzyme concentration, and the rate of the burst reflected the reactivity of the active site cysteine. The data were consistent with a mechanism in which an intramolecular disulfide is formed between the active site cysteine and a proximal cysteine during the burst reaction. Aromatic disulfides were found to react with the active site cysteines of full-length SHP-1 and truncated PTP1B also. Using vanadate to mask the active site cysteine, the active enzyme concentration could be assayed by comparing product yields for the reaction with aromatic disulfides in the presence and absence of vanadate at pH 8.0. These findings demonstrate the utility of aromatic disulfides as active site titrants and reactivity probes for tyrosine phosphatases.


Assuntos
Cisteína/metabolismo , Dissulfetos/química , Ácido Ditionitrobenzoico/química , Proteínas Tirosina Fosfatases/metabolismo , Sítios de Ligação , Peptídeos e Proteínas de Sinalização Intracelular , Cinética , Sondas Moleculares , Proteína Tirosina Fosfatase não Receptora Tipo 11 , Proteína Tirosina Fosfatase não Receptora Tipo 6 , Proteínas Tirosina Fosfatases/química
14.
J Mol Biol ; 271(2): 266-77, 1997 Aug 15.
Artigo em Inglês | MEDLINE | ID: mdl-9268658

RESUMO

Human cystatin C undergoes dimerization before unfolding. Dimerization leads to a complete loss of its activity as a cysteine proteinase inhibitor. A similar process of dimerization has been observed in cells, and may be related to the amyloid formation seen for the L68Q variant of the protein. Dimerization is barrier controlled, and no dimer/monomer interconversion can be observed at physiological conditions. As a consequence, very stable, "trapped" dimers can be easily separated from monomers. A study of the structural aspects of cystatin C dimer formation was undertaken using NMR spectroscopy. The monomer/dimer model was verified by (pulse field gradient NMR) self-diffusion molecular mass measurements. Complete backbone resonance assignments and secondary structure determination were obtained for the monomer using data from triple resonance experiments performed on 13C/15N doubly labeled protein. A marked similarity of the cystatin C secondary structure to that of chicken cystatin was observed. Using uniformly and amino-acid-specific 15N-enriched protein, backbone NH signals were assigned for cystatin C in its dimeric state. Comparison of 1H -15N correlation NMR spectra of the monomer and dimer shows that the three-dimensional structure remains unchanged in the dimer and that only local perturbations occur. These are localized to the amino acid residues comprising the cysteine proteinase binding site. Such a mode of dimerization readily explains the complete loss of the inhibitory activity in the dimer. The NMR results also demonstrate that the dimer is symmetric.


Assuntos
Cistatinas/química , Inibidores de Cisteína Proteinase/química , Conformação Proteica , Estrutura Secundária de Proteína , Sequência de Aminoácidos , Cistatina C , Difusão , Dimerização , Variação Genética , Humanos , Espectroscopia de Ressonância Magnética , Modelos Moleculares , Modelos Estruturais , Dados de Sequência Molecular , Mutagênese Sítio-Dirigida , Mutação Puntual , Dobramento de Proteína , Proteínas Recombinantes/química
15.
FEBS Lett ; 393(1): 24-6, 1996 Sep 09.
Artigo em Inglês | MEDLINE | ID: mdl-8804416

RESUMO

Synthetic peptides derived from the proregion of rat cathepsin B were used to identify functionally important regions and residues for cathepsin B inhibition. Successive 5 amino acid deletions of a 56 amino acid propeptide from both the N- and C-termini has allowed the identification of two regions important for inhibitory activity: the NTTWQ (residues 21p-25p) and CGTVL (42p-46p) regions. Alanine scanning of residues within these two regions indicates that Trp-24p and Cys-42p contribute strongly to inhibition, their replacement by Ala resulting in 160- and 140-fold increases in Ki, respectively.


Assuntos
Catepsina B/antagonistas & inibidores , Precursores de Proteínas/metabolismo , Alanina/metabolismo , Sequência de Aminoácidos , Animais , Sítios de Ligação , Catepsina B/metabolismo , Cumarínicos/metabolismo , Dipeptídeos/metabolismo , Dados de Sequência Molecular , Fragmentos de Peptídeos/metabolismo , Ratos
16.
Biochemistry ; 35(13): 3970-9, 1996 Apr 02.
Artigo em Inglês | MEDLINE | ID: mdl-8672429

RESUMO

Within the papain family of cysteine proteinases few other residues in addition to the catalytic triad, Cys25-His159-Asn175 (papain numbering) are completely conserved [Berti & Storer (1995) J. Mol. Biol. 246, 273-283]. One such residue is tryptophan 177 which participates in a Trp-His-type interaction with the catalytic His159. In all enzymes of this class for which a three-dimensional structure has been reported, an additional highly conserved tryptophan, Trp181, also interacts with Trp177 via an aromatic-aromatic interaction in which the planes of the indole rings are essentially perpendicular. Also, both indole rings participate as pseudo-hydrogen bond acceptors in interactions with the two side chain amide protons of Asn175. Clearly, the proximity of Trp177 and Trp181 to the catalytic triad residues His159 and Asn175 and their network of interactions points to potential contributions of these aromatic residues to catalysis. In this paper, using cathepsin S, a naturally occurring variant that has a phenylalanine residue at position 181, we report the kinetic characterization of mutants of residues 175, 177, and 181. The results are interpreted in terms of the side chain contributions to catalytic activity and thiolate-imidazolium ion-pair stability. For example, the side chain of Asn175 has a major influence on the ion-pair stability presumably through its hydrogen bond to His159. The magnitude of this effect is modulated by Trp177, which shields the His159-Asn175 hydrogen bond from solvent. The His159-Trp177 interaction also contributes significantly to ion-pair stability; however, Trp181 and its interactions with Asn175 and Trp177 do not influence ion-pair stability to a significant degree. The observation that certain mutations at positions 177 and 181 result in a reduction of kcat/Km but do not appear to influence ion-pair stability probably reflects the contributions of these residues to substrate binding.


Assuntos
Catepsinas/química , Catepsinas/metabolismo , Histidina , Conformação Proteica , Sequência de Aminoácidos , Aminoácidos/química , Sequência de Bases , Sítios de Ligação , Catepsinas/isolamento & purificação , Clonagem Molecular , Sequência Conservada , Cisteína Endopeptidases/química , Cisteína Endopeptidases/isolamento & purificação , Cisteína Endopeptidases/metabolismo , Humanos , Cinética , Modelos Moleculares , Dados de Sequência Molecular , Mutagênese Sítio-Dirigida , Oligodesoxirribonucleotídeos , Papaína/metabolismo , Fenilalanina , Mutação Puntual , Proteínas Recombinantes/química , Proteínas Recombinantes/isolamento & purificação , Proteínas Recombinantes/metabolismo , Saccharomyces cerevisiae , Especificidade por Substrato , Triptofano
17.
Structure ; 4(4): 405-16, 1996 Apr 15.
Artigo em Inglês | MEDLINE | ID: mdl-8740363

RESUMO

BACKGROUND: Cysteine proteases of the papain superfamily are synthesized as inactive precursors with a 60-110 residue N-terminal prosegment. The propeptides are potent inhibitors of their parent proteases. Although the proregion binding mode has been elucidated for all other protease classes, that of the cysteine proteases remained elusive. RESULTS: We report the three-dimensional structure of rat procathepsin B, determined at 2.8 A resolution. The 62-residue proregion does not form a globular structure on its own, but folds along the surface of mature cathepsin B. The N-terminal part of the proregion packs against a surface loop, with Trp24p (p indicating the proregion) playing a pivotal role in these interactions. Inhibition occurs by blocking access to the active site: part of the proregion enters the substrate-binding cleft in a similar manner to a natural substrate, but in a reverse orientation. CONCLUSIONS: The structure of procathepsin B provides the first insight into the mode of interaction between a mature cysteine protease from the papain superfamily and its prosegment. Maturation results in only one loop of cathepsin B changing conformation significantly, replacing contacts lost by removal of the prosegment. Contrary to many other proproteases, no rearrangement of the N terminus occurs following activation. Binding of the prosegment involves interaction with regions of the enzyme remote from the substrate-binding cleft and suggests a novel strategy for inhibitor design. The region of the prosegment where the activating cleavage occurs makes little contact with the enzyme, leading to speculation on the activation mechanism.


Assuntos
Catepsina B/química , Inibidores de Cisteína Proteinase/química , Precursores Enzimáticos/química , Animais , Sítios de Ligação , Catepsina B/genética , Catepsina B/metabolismo , Cristalografia por Raios X , Inibidores de Cisteína Proteinase/metabolismo , Ativação Enzimática , Precursores Enzimáticos/genética , Precursores Enzimáticos/metabolismo , Leucina/análogos & derivados , Leucina/química , Leucina/metabolismo , Modelos Moleculares , Conformação Proteica , Ratos , Proteínas Recombinantes/química , Proteínas Recombinantes/genética , Proteínas Recombinantes/metabolismo , Especificidade por Substrato
18.
J Chem Ecol ; 22(12): 2299-316, 1996 Dec.
Artigo em Inglês | MEDLINE | ID: mdl-24227305

RESUMO

Attraction of both sexes ofIps plastographus maritimus Lanier to bark-phloem-xylem discs of Monterey pine,Pinus radiata D. Don, was demonstrated in the laboratory. Increasing concentrations of male and female volatiles trapped separately and released in a one-to-one ratio decreased attraction for both sexes combined. Attraction of both sexes to volatiles derived from males and females tunneling together in a one-to-one ratio increased with increasing concentration of extract. Attraction of males and females to male-infested discs and to trapped male volatiles increased with increasing dose of males or male extract. Attraction of males and females to female-infested discs and to trapped female volatiles was also demonstrated. The presence of females in male galleries reduced the attractiveness of infested disks to both sexes combined. Increasing numbers of females, tunneling separately from males in the same disc, reduced attraction of males, but not females. When a constant attractive dose of male volatiles was released with increasing doses of female volatiles, there was no difference in response of either sex when female volatiles were present compared with the response to male volatiles alone. When a constant attractive dose of male volatiles was released with increasing concentrations of volatiles derived from males and females tunneling together in a one-to-one ratio, attraction ofI. p. maritimus decreased. Response of females was frequently higher than that of males to the same attractant source. Hence, both sexes produce an attractant, and both sexes tunneling together in the same gallery reduce attraction of males and females to an attractive dose of male attractant.

19.
J Chem Ecol ; 22(3): 559-73, 1996 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-24227492

RESUMO

The bark of Norway spruce trees,Picea abies (L.) Karst., was wounded to produce areas of bark with differing biochemical characteristics. Adults and larvae ofDendroctonus micans Kug. were inserted into these trees at points around the wounds. Larval survival was higher, larval dry weights were higher, and adults were more likely to oviposit at sites around the wound that had higher phloem moisture contents. Larvae showed higher survival and dry weights in phloem with low terpene contents. Adults oviposited in phloem with lower stilbene glucoside contents. Phloem moisture differed at sites around the wound compared with that at a control site away from the wound, and the nitrogen content of entire bark cores was higher above wounds than at control sites away from the wounds. Phloem moisture correlated with the nitrogen content of entire bark. Phloem terpene contents correlated with each other, as did the stilbene contents. Associations between the host exploitation pattern ofD. micans and the biochemistry of the host phloem are discussed in relation to preselection by adults of sites suitable for larval development.

20.
Biochemistry ; 34(50): 16382-8, 1995 Dec 19.
Artigo em Inglês | MEDLINE | ID: mdl-8845364

RESUMO

A peptide nitrile hydratase activity has been engineered into the cysteine protease papain by a single carefully selected mutation at the active site of the enzyme. The papain variant Gln19Glu hydrolyzes the substrate MeOCO-PheAla-CN to the corresponding amide with a kcat/KM value of 1.15 x 10(3) M-1 s-1. The reaction leads to an accumulation of the corresponding amide, which is then further hydrolyzed to the acid by the natural amidase activity of the enzyme. The pH-dependency of the nitrile hydratase activity of Gln19Glu supports the involvement of the acid form of the Glu19 residue in the reaction. The wild type enzyme displays very weak nitrile hydratase activity, and the introduction of a glutamic acid residue in the oxyanion hole of papain causes the kcat at pH 5 to increase by a factor of at least 4 x 10(5). Peptide nitriles react with cysteine proteases to form thioimidates, and the role of the glutamic acid residue introduced at position 19 in the Gln19Glu enzyme is to participate in the acid-catalyzed hydrolysis of the thiomidate to the amide by the provision of a proton to form the more reactive protonated thioimidate. This dramatically decreases the energy barrier for the hydrolysis of the thioimidate, as shown by the impressive increase in kcat. The success of the rational approach undertaken is a consequence of the level of understanding of the basic catalytic properties of cysteine proteases of the papain family.


Assuntos
Hidroliases/genética , Hidroliases/metabolismo , Nitrilas/metabolismo , Papaína/genética , Peptídeos/metabolismo , Amidoidrolases/metabolismo , Concentração de Íons de Hidrogênio , Hidrólise , Cinética , Modelos Químicos , Mutagênese Sítio-Dirigida , Peptídeos/química
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