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1.
Nucleic Acids Res ; 48(9): 5169-5182, 2020 05 21.
Artigo em Inglês | MEDLINE | ID: mdl-32246719

RESUMO

One primary objective of synthetic biology is to improve the sustainability of chemical manufacturing. Naturally occurring biological systems can utilize a variety of carbon sources, including waste streams that pose challenges to traditional chemical processing, such as lignin biomass, providing opportunity for remediation and valorization of these materials. Success, however, depends on identifying micro-organisms that are both metabolically versatile and engineerable. Identifying organisms with this combination of traits has been a historic hindrance. Here, we leverage the facile genetics of the metabolically versatile bacterium Acinetobacter baylyi ADP1 to create easy and rapid molecular cloning workflows, including a Cas9-based single-step marker-less and scar-less genomic integration method. In addition, we create a promoter library, ribosomal binding site (RBS) variants and test an unprecedented number of rationally integrated bacterial chromosomal protein expression sites and variants. At last, we demonstrate the utility of these tools by examining ADP1's catabolic repression regulation, creating a strain with improved potential for lignin bioprocessing. Taken together, this work highlights ADP1 as an ideal host for a variety of sustainability and synthetic biology applications.


Assuntos
Acinetobacter/genética , Engenharia Metabólica , Acinetobacter/metabolismo , Clonagem Molecular/métodos , Genoma Bacteriano , Genômica , Lignina/metabolismo , Regiões Promotoras Genéticas , Ribossomos/metabolismo
2.
Mol Neurobiol ; 54(9): 6750-6761, 2017 11.
Artigo em Inglês | MEDLINE | ID: mdl-27752994

RESUMO

Despite years of research, most preclinical trials on ischemic stroke have remained unsuccessful owing to poor methodological and statistical standards leading to "translational roadblocks." Various behavioral tests have been established to evaluate traits such as sensorimotor function, cognitive and social interactions, and anxiety-like and depression-like behavior. A test's validity is of cardinal importance as it influences the chance of a successful translation of preclinical results to clinical settings. The mission of choosing a behavioral test for a particular project is, therefore, imperative and the present review aims to provide a structured way to evaluate rodent behavioral tests with implications in ischemic stroke.


Assuntos
Isquemia Encefálica/diagnóstico , Isquemia Encefálica/psicologia , Atividade Motora/fisiologia , Acidente Vascular Cerebral/diagnóstico , Acidente Vascular Cerebral/psicologia , Animais , Comportamento Exploratório/fisiologia , Força da Mão/fisiologia , Camundongos , Ratos , Teste de Desempenho do Rota-Rod/métodos , Teste de Desempenho do Rota-Rod/psicologia
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