Development of 15 microsatellite loci in the endangered Streptanthus glandulosus subsp. niger (Brassicaceae).

PREMISE OF THE STUDY: The endangered Streptanthus glandulosus subsp. niger (Brassicaceae) is endemic to a single peninsula in California and threatened by fragmentation. We developed microsatellite markers to investigate genetic diversity in the two extant populations and the degree to which they have diverged from one another. METHODS AND RESULTS: We used Illumina HiSeq high-throughput sequencing to develop 15 microsatellite markers, 14 of which were polymorphic. These di- and trinucleotide repeats yielded one to 11 alleles per locus in 61 plants across the two populations. Levels of observed and expected heterozygosities ranged from 0.108 to 0.946 and 0.257 to 0.839, respectively. We demonstrated cross-amplification in a second rare subspecies, S. glandulosus subsp. secundus, and in the widespread congener S. tortuosus. CONCLUSIONS: These are the first microsatellites reported for this subspecies, and they will aid in the inclusion of genetic information in conservation planning. Cross-amplification was demonstrated in two related taxa, including one of conservation concern.

Native and Invading Yellow Starthistle (Centaurea solstitialis) Microbiomes Differ in Composition and Diversity of Bacteria.

Invasive species could benefit from being introduced to locations with more favorable species interactions, including the loss of enemies, the gain of mutualists, or the simplification of complex interaction networks. Microbiomes are an important source of species interactions with strong fitness effects on multicellular organisms, and these interactions are known to vary across regions. The highly invasive plant yellow starthistle (Centaurea solstitialis) has been shown to experience more favorable microbial interactions in its invasions of the Americas, but the microbiome that must contribute to this variation in interactions is unknown. We sequenced amplicons of 16S rRNA genes to characterize bacterial community compositions in the phyllosphere, ectorhizosphere, and endorhizosphere of yellow starthistle plants from seven invading populations in California, USA, and eight native populations in Europe. We tested for the differentiation of microbiomes by geography, plant compartment, and plant genotype. Bacterial communities differed significantly between native and invading plants within plant compartments, with consistently lower diversity in the microbiome of invading plants. The diversity of bacteria in roots was positively correlated with plant genotype diversity within both ranges, but this relationship did not explain microbiome differences between ranges. Our results reveal that these invading plants are experiencing either a simplified microbial environment or simplified microbial interactions as a result of the dominance of a few taxa within their microbiome. Our findings highlight several alternative hypotheses for the sources of variation that we observe in invader microbiomes and the potential for altered bacterial interactions to facilitate invasion success.IMPORTANCE Previous studies have found that introduced plants commonly experience more favorable microbial interactions in their non-native range, suggesting that changes to the microbiome could be an important contributor to invasion success. Little is known about microbiome variation across native and invading populations, however, and the potential sources of more favorable interactions are undescribed. Here, we report one of the first microbiome comparisons of plants from multiple native and invading populations, in the noxious weed yellow starthistle. We identify clear differences in composition and diversity of microbiome bacteria. Our findings raise new questions about the sources of these differences, and we outline the next generation of research that will be required to connect microbiome variation to its potential role in plant invasions.

Population genomic analyses reveal a history of range expansion and trait evolution across the native and invaded range of yellow starthistle (Centaurea solstitialis).

Identifying sources of genetic variation and reconstructing invasion routes for non-native introduced species is central to understanding the circumstances under which they may evolve increased invasiveness. In this study, we used genome-wide single nucleotide polymorphisms to study the colonization history of Centaurea solstitialis in its native range in Eurasia and invasions into the Americas. We leveraged this information to pinpoint key evolutionary shifts in plant size, a focal trait associated with invasiveness in this species. Our analyses revealed clear population genomic structure of potential source populations in Eurasia, including deep differentiation of a lineage found in the southern Apennine and Balkan Peninsulas and divergence among populations in Asia, eastern Europe and western Europe. We found strongest support for an evolutionary scenario in which western European populations were derived from an ancient admixture event between populations from eastern Europe and Asia, and subsequently served as the main genetic 'bridgehead' for introductions to the Americas. Introductions to California appear to be from a single source region, and multiple, independent introductions of divergent genotypes likely occurred into the Pacific Northwest. Plant size has evolved significantly at three points during range expansion, including a large size increase in the lineage responsible for the aggressive invasion of the California interior. These results reveal a long history of colonization, admixture and trait evolution in C. solstitialis, and suggest routes for improving evidence-based management decisions for one of the most ecologically and economically damaging invasive species in the western United States.

Evolution of invasiveness through increased resource use in a vacant niche.

Non-native plants are now a pervasive feature of ecosystems across the globe1. One hypothesis for this pattern is that introduced species occupy open niches in recipient communities2,3. If true, then non-native plants should often benefit from low competition for limiting resources that define niches. Many plants have evolved larger size after introduction, consistent with increased access to limiting resources4-9. It has been difficult to test whether larger size reflects adaptation to exploit open resources, however, because vacant niches are generally challenging to identify in plants. Here we take advantage of a situation in which a highly invasive non-native plant, Centaurea solstitialis L. (yellow starthistle, hereafter 'YST'), occupies a well-described environmental niche, wherein water is a known limiting resource10,11. We use a glasshouse common environment and climatic niche modeling to reveal that invading YST has evolved a higher-fitness life history at the expense of increased dependence on water. Critically, historical declines in resident competitors have made water more available for introduced plants11,12, demonstrating how native biodiversity declines can open niches and create opportunities for introduced species to evolve increased resource use, a potentially widespread basis for introduction success and the evolution of invasive life histories.

Biocontrol attack increases pollen limitation under some circumstances in the invasive plant Centaurea solstitialis.

Herbivore damage often deters pollinator visitation and many invasive plants in North America are pollinator-dependent. This has important implications for the biological control of invasive plants because it means that agents that deter pollinators may have a larger than expected impact on the plant. Yet interactions between pollinators and biocontrol agents are rarely evaluated. Centaurea solstitialis, one of the most problematic invasive species in California, is dependent on pollinators for reproduction. I factorially manipulated infection by a biocontrol pathogen and pollen supplementation to test for (1) pollen limitation in C. solstitialis, (2) whether infection increased pollen limitation, and (3) whether this varied across a soil moisture gradient. Plants growing on north-facing slopes where soil moisture was higher experienced mild pollen limitation in the absence of the pathogen and more pronounced pollen limitation when they were infected. Plants on drier south-facing slopes did not suffer from pollen limitation but instead appeared to suffer from resource limitation. Pathogen infection directly reduced seed set in C. solstitialis by 67-72%. On north-facing slopes, infection had an additional, indirect effect by increasing the degree of pollen limitation plants experienced. The trait that mediates this indirect pathogen-pollinator interaction is the number of inflorescences plants produced: infected plants made fewer inflorescences which led to greater pollen limitation. Although in the present study this outcome is dependent on abiotic factors that vary over small spatial scales, exploiting other invasive plants' dependence on pollinators by selecting agents that deter visitation may enhance agent impact.

Variable effects of a generalist parasitoid on a biocontrol seed predator and its target weed.

Biological control (the importation of enemies from an invader's native range) is often considered our best chance of controlling the most widespread invaders. Ideally, the agent reduces invader abundance to some acceptably low level, and the two coexist at low density with the agent providing continuous control over the long-term. But the outcome may be complicated when the agent is attacked by native predators and parasites. We used a spatially explicit, discrete-time, individual-based, coupled plant-seed predator-parasitoid model to estimate the impact of the biocontrol agent Eustenopus villosus (a seed predator) on the invasive, annual weed Centaurea solstitialis, both with and without the generalist parasitoid Pyemotes tritici. We estimated the agent's ability to reduce plant density, spread rate, and population growth rate over 50 years. We used long-term demographic data from two sites in central California, USA, to parameterize the model and assess how populations in different climatic zones might respond differently to the agent and the parasitoid. We found that the biocontrol agent reduced plant density (relative to predictions for an uncontrolled invasion), but its impact on the invader's spread rate was modest and inconsistent. The agent had no long-term impact on population growth rate (lambda). Parasitism caused a trophic cascade, the strength of which varied between sites. At our coastal site, the parasitoid entirely eliminated the impact of the agent on the plant. At our Central Valley site, even when parasitized, the agent significantly reduced plant density and spread rate over several decades (although to a lesser degree than when it was not parasitized), but not invader lambda. Surprisingly, we also found that the length of time the invader was allowed to spread across the landscape prior to introducing the agent (5, 25, or 50 years) had little influence over its ability to control the weed in the long-term. This is encouraging news for land managers attempting to control invasive plants that have already established widespread, high-density populations. Unfortunately, our results also show that attack by the native generalist parasitoid had a larger influence over how effectively the agent reduced invader performance.

Complex interactions among biocontrol agents, pollinators, and an invasive weed: a structural equation modeling approach.

Herbivores, seed predators, and pollinators can exert strong impacts on their host plants. They can also affect the strength of each other's impact by modifying traits in their shared host, producing super- or sub-additive outcomes. This phenomenon is especially relevant to biological control of invasive plants because most invaders are attacked by multiple agents. Unfortunately, complex interactions among agents are rarely studied. We used structural equation modeling (SEM) to quantify the effect of two biocontrol agents and generalist pollinators on the invasive weed Centaurea solstitialis, and to identify and quantify the direct and indirect interaction pathways among them. The weevil Eustenopus villosus is both a bud herbivore and a predispersal seed predator; the fly Chaetorellia succinea is also a predispersal seed predator; Apis mellifera is the primary pollinator. We conducted this work at three sites spanning the longitudinal range of C. solstitialis in California (USA) from the coast to the Sierra Nevada Mountains. SEM revealed that bud herbivory had the largest total effect on the weed's fecundity. The direct effect of bud herbivory on final seed set was 2-4 times larger in magnitude than the direct effect of seed predation by both agents combined. SEM also revealed important indirect interactions; by reducing the number of inflorescences plants produced, bud herbivory indirectly reduced the plant's attractiveness to ovipositing seed predators. This indirect, positive pathway reduced bud herbivory's direct negative effect by 11-25%. In the same way, bud herbivory also reduced pollinator visitation, although the magnitude of this pathway was relatively small. E. villosus oviposition deterred C. succinea oviposition, which is unfortunate because C. succinea is the more voracious of the seed predators. Finally, C. succinea oviposition indirectly deterred pollinator visitation, thereby enhancing its net effect on the plant. This study demonstrates the powerful insights that can be gained from the SEM approach in understanding the multiple direct and indirect interactions among agents and pollinators and their effects on an invasive weed. Such an approach may improve our ability to manage weeds with biocontrol agents by identifying pathways that could be exploited by future agents and minimizing the possibility of interference with established agents.

Trait-mediated interactions and lifetime fitness of the invasive plant Centaurea solstitialis.

Plants interact with numerous enemies and mutualists simultaneously and sequentially. Such multispecies interactions can give rise to trait-mediated indirect effects that are likely to be common in nature but which are also inherently difficult to predict. Understanding multispecies interactions is also important in the use of biological control agents to control invasive plants because modern approaches to biocontrol rely on releasing multiple agents for each target weed. Centaurea solstitialis is one of the most problematic invasive weeds in California, USA, and the weevil Eustenopus villosus is its dominant biological control agent. We conducted a field experiment to quantitatively assess the direct effect of the recently approved biocontrol pathogen Puccinia jaceae f.s. solstitialis on plant performance and any indirect effects that might arise by altering the plant's interactions with Eustenopus or its pollinators (principally the nonnative Apis mellifera). We documented both synergy and interference between the two biocontrol agents depending on the life stage of the weevil. Puccinia infection increased the impact of bud-feeding by the adult weevils but reduced the impact of seed-feeding by larval weevils. Neither infection nor Eustenopus attack had an effect on pollinator visitation. The net effect was that attack by both the pathogen and the weevil did not reduce plant fitness relative to plants attacked only by the weevil. Because the consequence to the plant of interacting with one species may depend on the presence or absence of other interacting species, a careful consideration of multispecies interactions may be necessary for the selection of biocontrol agents that act in a complementary manner to reduce plant fitness. Likewise, relatively tractable weed-biocontrol systems allow us to examine multispecies interactions that can be difficult to study experimentally in native systems that are composed of numerous species with well-established populations.

Widespread seed limitation affects plant density but not population trajectory in the invasive plant Centaurea solstitialis.

In some plant populations, the availability of seeds strongly regulates recruitment. However, a scarcity of germination microsites, granivory or density-dependent mortality can reduce the number of plants that germinate or survive to flower. The relative strengths of these controls are unknown for most plant populations and for exotic invaders in particular. We conducted a seed addition experiment with a granivore exclusion treatment in a field setting to explore how these factors interact to regulate populations of the widespread invader Centaurea solstitialis (yellow starthistle) at three study sites across the plant's range in California. We coupled the experimental approach with observational studies within established C. solstitialis populations to estimate seed rain, recruitment and mortality at natural densities. Seed limitation occurred in both experimental and observational plots in all populations. Although vertebrate granivores were active at each site, they had no effect on C. solstitialis recruitment. Density increased mortality, but the effect was variable and weak relative to its effect on fecundity. The seed limitation that was evident at the seedling stage persisted to flowering. Seed-limited populations such as these ought to be highly sensitive to losses to seed predators, and many biological control agents, including those established for C. solstitialis, are seed predators. However, flowering plant density was decoupled from seed production by a strong compensatory response in the surviving plants; seed production was nearly constant in plots across all seed addition levels. Thus, flowering plant density is reduced by the established biocontrol agents, but seed production compensates to replace the population every generation, and no long-term decline is predicted.